RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 TMC4Q7Z404 712 aa7.54□□□□□ -1.2
USP3-212ENST00000559276 MICALL2Q8IY33 904 aa7.54□□□□□ -1.2
USP3-212ENST00000559276 C8orf58Q8NAV2 365 aa7.54□□□□□ -1.2
USP3-212ENST00000559276 ZC3H15Q8WU90 426 aaKnown RBP7.54□□□□□ -1.2
USP3-212ENST00000559276 SEC31BQ9NQW1 1179 aa7.54□□□□□ -1.2
USP3-212ENST00000559276 HYPKQ9NX55 129 aa7.54□□□□□ -1.2
USP3-212ENST00000559276 TSKSQ9UJT2 592 aa7.54□□□□□ -1.2
USP3-212ENST00000559276 NSFL1CQ9UNZ2 370 aaKnown RBP7.54□□□□□ -1.2
USP3-212ENST00000559276 ELL2O00472 640 aaPredicted RBP7.53□□□□□ -1.2
USP3-212ENST00000559276 IRS4O14654 1257 aaPredicted RBP7.53□□□□□ -1.2
USP3-212ENST00000559276 RIMBP2O15034 1052 aa7.53□□□□□ -1.2
USP3-212ENST00000559276 ECE1P42892 770 aa7.53□□□□□ -1.2
USP3-212ENST00000559276 RPS8P62241 208 aaKnown RBP7.53□□□□□ -1.2
USP3-212ENST00000559276 GRM1Q13255 1194 aa7.53□□□□□ -1.2
USP3-212ENST00000559276 WDR43Q15061 677 aaKnown RBP eCLIP7.53□□□□□ -1.2
USP3-212ENST00000559276 DOK7Q18PE1 504 aa7.53□□□□□ -1.2
USP3-212ENST00000559276 WASHC4Q2M389 1173 aa7.53□□□□□ -1.2
USP3-212ENST00000559276 CCDC184Q52MB2 194 aa7.53□□□□□ -1.2
USP3-212ENST00000559276 USP48Q86UV5 1035 aa7.53□□□□□ -1.2
USP3-212ENST00000559276 ZBTB38Q8NAP3 1195 aaPredicted RBP7.53□□□□□ -1.2
USP3-212ENST00000559276 TBC1D16Q8TBP0 767 aa7.53□□□□□ -1.2
USP3-212ENST00000559276 DPF2Q92785 391 aa7.53□□□□□ -1.2
USP3-212ENST00000559276 JARID2Q92833 1246 aaPredicted RBP7.53□□□□□ -1.2
USP3-212ENST00000559276 ABHD8Q96I13 439 aa7.53□□□□□ -1.2
USP3-212ENST00000559276 HHIPL1Q96JK4 782 aa7.53□□□□□ -1.2
USP3-212ENST00000559276 BCL2L13Q9BXK5 485 aa7.53□□□□□ -1.2
USP3-212ENST00000559276 TMX4Q9H1E5 349 aaPredicted RBP7.53□□□□□ -1.2
USP3-212ENST00000559276 PODXL2Q9NZ53 605 aa7.53□□□□□ -1.2
USP3-212ENST00000559276 ASTN2O75129 1339 aaPredicted RBP7.52□□□□□ -1.2
USP3-212ENST00000559276 SPEF2Q9C093 1822 aa7.52□□□□□ -1.2
USP3-212ENST00000559276 TNRC18O15417 2968 aaPredicted RBP7.52□□□□□ -1.21
USP3-212ENST00000559276 FAM155AB1AL88 458 aaPredicted RBP7.52□□□□□ -1.21
USP3-212ENST00000559276 ECE2O60344 883 aa7.52□□□□□ -1.21
USP3-212ENST00000559276 MAP2K2P36507 400 aa7.52□□□□□ -1.21
USP3-212ENST00000559276 CDC37L1Q7L3B6 337 aa7.52□□□□□ -1.21
USP3-212ENST00000559276 TSPYL6Q8N831 410 aa7.52□□□□□ -1.21
USP3-212ENST00000559276 MYD88Q99836 296 aa7.52□□□□□ -1.21
USP3-212ENST00000559276 MRS2Q9HD23 443 aa7.52□□□□□ -1.21
USP3-212ENST00000559276 IFT57Q9NWB7 429 aa7.52□□□□□ -1.21
USP3-212ENST00000559276 ZNF609O15014 1411 aa7.52□□□□□ -1.21
USP3-212ENST00000559276 CASP8AP2Q9UKL3 1982 aa7.51□□□□□ -1.21
USP3-212ENST00000559276 MYH3P11055 1940 aa7.51□□□□□ -1.21
USP3-212ENST00000559276 ADM5C9JUS6 153 aa7.51□□□□□ -1.21
USP3-212ENST00000559276 C6orf229H3BNL8 230 aa7.51□□□□□ -1.21
USP3-212ENST00000559276 H7C1D1 291 aa7.51□□□□□ -1.21
USP3-212ENST00000559276 PCCAP05165 728 aaPredicted RBP7.51□□□□□ -1.21
USP3-212ENST00000559276 IGKV5-2P06315 115 aa7.51□□□□□ -1.21
USP3-212ENST00000559276 VIL1P09327 827 aaKnown RBP7.51□□□□□ -1.21
USP3-212ENST00000559276 TBC1D10BQ4KMP7 808 aaPredicted RBP7.51□□□□□ -1.21
USP3-212ENST00000559276 PAXIP1Q6ZW49 1069 aaPredicted RBP7.51□□□□□ -1.21
USP3-212ENST00000559276 RIC3Q7Z5B4 369 aa7.51□□□□□ -1.21
USP3-212ENST00000559276 GMLQ99445 158 aa7.51□□□□□ -1.21
USP3-212ENST00000559276 ZNF408Q9H9D4 720 aa7.51□□□□□ -1.21
USP3-212ENST00000559276 RPS12P25398 132 aaKnown RBP7.5□□□□□ -1.21
USP3-212ENST00000559276 BRPF1P55201 1214 aaPredicted RBP7.5□□□□□ -1.21
USP3-212ENST00000559276 ZNF280AP59817 542 aaPredicted RBP7.5□□□□□ -1.21
USP3-212ENST00000559276 GNAI1P63096 354 aa7.5□□□□□ -1.21
USP3-212ENST00000559276 TPRNQ4KMQ1 711 aa7.5□□□□□ -1.21
USP3-212ENST00000559276 CCDC191Q8NCU4 936 aa7.5□□□□□ -1.21
USP3-212ENST00000559276 CCDC85AQ96PX6 553 aaPredicted RBP7.5□□□□□ -1.21
USP3-212ENST00000559276 METTL22Q9BUU2 404 aaPredicted RBP7.5□□□□□ -1.21
USP3-212ENST00000559276 NOP58Q9Y2X3 529 aaKnown RBP7.5□□□□□ -1.21
USP3-212ENST00000559276 A0A1B0GUL6 1792 aa7.49□□□□□ -1.21
USP3-212ENST00000559276 PDE8AO60658 829 aa7.49□□□□□ -1.21
USP3-212ENST00000559276 UFL1O94874 794 aa7.49□□□□□ -1.21
USP3-212ENST00000559276 ANP32AP39687 249 aaKnown RBP7.49□□□□□ -1.21
USP3-212ENST00000559276 RGS19P49795 217 aa7.49□□□□□ -1.21
USP3-212ENST00000559276 HUNKP57058 714 aa7.49□□□□□ -1.21
USP3-212ENST00000559276 GOLGA2Q08379 1002 aa7.49□□□□□ -1.21
USP3-212ENST00000559276 KIF4BQ2VIQ3 1234 aa7.49□□□□□ -1.21
USP3-212ENST00000559276 RBM26Q5T8P6 1007 aaKnown RBP7.49□□□□□ -1.21
USP3-212ENST00000559276 G2E3Q7L622 706 aa7.49□□□□□ -1.21
USP3-212ENST00000559276 KRT26Q7Z3Y9 468 aa7.49□□□□□ -1.21
USP3-212ENST00000559276 TTLL11Q8NHH1 800 aa7.49□□□□□ -1.21
USP3-212ENST00000559276 TSR2Q969E8 191 aaKnown RBP7.49□□□□□ -1.21
USP3-212ENST00000559276 EYA3Q99504 573 aa7.49□□□□□ -1.21
USP3-212ENST00000559276 CWC25Q9NXE8 425 aaPredicted RBP7.49□□□□□ -1.21
USP3-212ENST00000559276 MAP3K2Q9Y2U5 619 aa7.49□□□□□ -1.21
USP3-212ENST00000559276 PI4KAP2A4QPH2 592 aa7.48□□□□□ -1.21
USP3-212ENST00000559276 CASP7P55210 303 aa7.48□□□□□ -1.21
USP3-212ENST00000559276 NOGQ13253 232 aa7.48□□□□□ -1.21
USP3-212ENST00000559276 CWF19L2Q2TBE0 894 aaKnown RBP7.48□□□□□ -1.21
USP3-212ENST00000559276 CCDC152Q4G0S7 254 aa7.48□□□□□ -1.21
USP3-212ENST00000559276 RGMBQ6NW40 437 aa7.48□□□□□ -1.21
USP3-212ENST00000559276 RSBN1LQ6PCB5 846 aaPredicted RBP7.48□□□□□ -1.21
USP3-212ENST00000559276 KSR2Q6VAB6 950 aa7.48□□□□□ -1.21
USP3-212ENST00000559276 TXNRD3Q86VQ6 643 aa7.48□□□□□ -1.21
USP3-212ENST00000559276 PI4KAP1Q8N8J0 262 aa7.48□□□□□ -1.21
USP3-212ENST00000559276 MXD3Q9BW11 206 aa7.48□□□□□ -1.21
USP3-212ENST00000559276 ZC3H12CQ9C0D7 883 aaKnown RBP7.48□□□□□ -1.21
USP3-212ENST00000559276 MCOLN1Q9GZU1 580 aa7.48□□□□□ -1.21
USP3-212ENST00000559276 GREM2Q9H772 168 aa7.48□□□□□ -1.21
USP3-212ENST00000559276 GBA2Q9HCG7 927 aaPredicted RBP7.48□□□□□ -1.21
USP3-212ENST00000559276 GGA3Q9NZ52 723 aa7.48□□□□□ -1.21
USP3-212ENST00000559276 ANKIB1Q9P2G1 1089 aa7.48□□□□□ -1.21
USP3-212ENST00000559276 GGA1Q9UJY5 639 aa7.48□□□□□ -1.21
USP3-212ENST00000559276 SCAF8Q9UPN6 1271 aaKnown RBP7.48□□□□□ -1.21
USP3-212ENST00000559276 PAPPA2Q9BXP8 1791 aa7.47□□□□□ -1.21
USP3-212ENST00000559276 NEURL1BA8MQ27 555 aa7.47□□□□□ -1.21
USP3-212ENST00000559276 H7C1W4 665 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms