RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 ANKRD18BA2A2Z9 1011 aa17.43■□□□□ 0.38
TSPAN3-205ENST00000558745 POTECB2RU33 542 aa17.43■□□□□ 0.38
TSPAN3-205ENST00000558745 FZD9O00144 591 aa17.43■□□□□ 0.38
TSPAN3-205ENST00000558745 IPO8O15397 1037 aaKnown RBP17.43■□□□□ 0.38
TSPAN3-205ENST00000558745 SLC34A2O95436 690 aa17.43■□□□□ 0.38
TSPAN3-205ENST00000558745 IGHMBP2P38935 993 aaKnown RBP17.43■□□□□ 0.38
TSPAN3-205ENST00000558745 DPY19L2Q6NUT2 758 aa17.43■□□□□ 0.38
TSPAN3-205ENST00000558745 ATF7IPQ6VMQ6 1270 aa17.43■□□□□ 0.38
TSPAN3-205ENST00000558745 ANKRD44Q8N8A2 993 aa17.43■□□□□ 0.38
TSPAN3-205ENST00000558745 SUPT20HQ8NEM7 779 aa17.43■□□□□ 0.38
TSPAN3-205ENST00000558745 BSDC1Q9NW68 430 aaPredicted RBP17.43■□□□□ 0.38
TSPAN3-205ENST00000558745 RTL9Q8NET4 1388 aa17.43■□□□□ 0.38
TSPAN3-205ENST00000558745 WDR90Q96KV7 1748 aa17.42■□□□□ 0.38
TSPAN3-205ENST00000558745 DUOX1Q9NRD9 1551 aa17.42■□□□□ 0.38
TSPAN3-205ENST00000558745 KDM2BQ8NHM5 1336 aa17.42■□□□□ 0.38
TSPAN3-205ENST00000558745 ZC3H4Q9UPT8 1303 aaKnown RBP17.42■□□□□ 0.38
TSPAN3-205ENST00000558745 KIAA2012Q0VF49 1180 aa17.42■□□□□ 0.38
TSPAN3-205ENST00000558745 IFIT5Q13325 482 aaKnown RBP17.42■□□□□ 0.38
TSPAN3-205ENST00000558745 DOK7Q18PE1 504 aa17.42■□□□□ 0.38
TSPAN3-205ENST00000558745 ZKSCAN2Q63HK3 967 aa17.42■□□□□ 0.38
TSPAN3-205ENST00000558745 SNAP23O00161 211 aa17.41■□□□□ 0.38
TSPAN3-205ENST00000558745 UFL1O94874 794 aa17.41■□□□□ 0.38
TSPAN3-205ENST00000558745 WASHC4Q2M389 1173 aa17.41■□□□□ 0.38
TSPAN3-205ENST00000558745 INTS3Q68E01 1043 aaKnown RBP17.41■□□□□ 0.38
TSPAN3-205ENST00000558745 NIM1KQ8IY84 436 aa17.41■□□□□ 0.38
TSPAN3-205ENST00000558745 HELBQ8NG08 1087 aaPredicted RBP17.41■□□□□ 0.38
TSPAN3-205ENST00000558745 MPHOSPH8Q99549 860 aa17.41■□□□□ 0.38
TSPAN3-205ENST00000558745 MEIS3Q99687 375 aa17.41■□□□□ 0.38
TSPAN3-205ENST00000558745 PODXL2Q9NZ53 605 aa17.41■□□□□ 0.38
TSPAN3-205ENST00000558745 SPEF2Q9C093 1822 aa17.41■□□□□ 0.38
TSPAN3-205ENST00000558745 LRRC37AA6NMS7 1700 aa17.4■□□□□ 0.38
TSPAN3-205ENST00000558745 CCDC57Q2TAC2 916 aa17.4■□□□□ 0.38
TSPAN3-205ENST00000558745 TMEM57Q8N5G2 664 aa17.4■□□□□ 0.38
TSPAN3-205ENST00000558745 PUS3Q9BZE2 481 aaKnown RBP17.4■□□□□ 0.38
TSPAN3-205ENST00000558745 DBNDD1Q9H9R9 158 aa17.4■□□□□ 0.38
TSPAN3-205ENST00000558745 KCNQ5Q9NR82 932 aa17.4■□□□□ 0.38
TSPAN3-205ENST00000558745 GGA1Q9UJY5 639 aa17.4■□□□□ 0.38
TSPAN3-205ENST00000558745 GJA3Q9Y6H8 435 aa17.4■□□□□ 0.38
TSPAN3-205ENST00000558745 YDJCA8MPS7 323 aa17.39■□□□□ 0.37
TSPAN3-205ENST00000558745 TAF5LO75529 589 aa17.39■□□□□ 0.37
TSPAN3-205ENST00000558745 EIF6P56537 245 aaKnown RBP17.39■□□□□ 0.37
TSPAN3-205ENST00000558745 RABL6Q3YEC7 729 aaPredicted RBP17.39■□□□□ 0.37
TSPAN3-205ENST00000558745 KLHDC4Q8TBB5 520 aa17.39■□□□□ 0.37
TSPAN3-205ENST00000558745 XDHP47989 1333 aa17.38■□□□□ 0.37
TSPAN3-205ENST00000558745 PLIN1O60240 522 aa17.38■□□□□ 0.37
TSPAN3-205ENST00000558745 RAD17O75943 681 aa17.38■□□□□ 0.37
TSPAN3-205ENST00000558745 UBTFL1P0CB47 393 aaPredicted RBP17.38■□□□□ 0.37
TSPAN3-205ENST00000558745 RLBP1P12271 317 aa17.38■□□□□ 0.37
TSPAN3-205ENST00000558745 CHRNDQ07001 517 aa17.38■□□□□ 0.37
TSPAN3-205ENST00000558745 CXCL9Q07325 125 aa17.38■□□□□ 0.37
TSPAN3-205ENST00000558745 TAF7LQ5H9L4 462 aa17.38■□□□□ 0.37
TSPAN3-205ENST00000558745 ZC3H12CQ9C0D7 883 aaKnown RBP17.38■□□□□ 0.37
TSPAN3-205ENST00000558745 VPS33BQ9H267 617 aa17.38■□□□□ 0.37
TSPAN3-205ENST00000558745 ZNRF3Q9ULT6 936 aa17.38■□□□□ 0.37
TSPAN3-205ENST00000558745 LRRFIP2Q9Y608 721 aaKnown RBP17.38■□□□□ 0.37
TSPAN3-205ENST00000558745 ATP2B4P23634 1241 aa17.37■□□□□ 0.37
TSPAN3-205ENST00000558745 LDHAL6AQ6ZMR3 332 aa17.37■□□□□ 0.37
TSPAN3-205ENST00000558745 TXNRD3Q86VQ6 643 aa17.37■□□□□ 0.37
TSPAN3-205ENST00000558745 LTBP1Q14766 1721 aa17.36■□□□□ 0.37
TSPAN3-205ENST00000558745 VEGFAP15692 232 aaPredicted RBP17.36■□□□□ 0.37
TSPAN3-205ENST00000558745 KLRK1P26718 216 aa17.36■□□□□ 0.37
TSPAN3-205ENST00000558745 RBM46Q8TBY0 533 aaKnown RBP17.36■□□□□ 0.37
TSPAN3-205ENST00000558745 EYA3Q99504 573 aa17.36■□□□□ 0.37
TSPAN3-205ENST00000558745 CNNM1Q9NRU3 951 aa17.36■□□□□ 0.37
TSPAN3-205ENST00000558745 RCAN3Q9UKA8 241 aa17.36■□□□□ 0.37
TSPAN3-205ENST00000558745 PCNTO95613 3336 aa17.35■□□□□ 0.37
TSPAN3-205ENST00000558745 LRRC24Q50LG9 513 aa17.35■□□□□ 0.37
TSPAN3-205ENST00000558745 DZIP1LQ8IYY4 767 aaKnown RBP17.35■□□□□ 0.37
TSPAN3-205ENST00000558745 PANK1Q8TE04 598 aa17.35■□□□□ 0.37
TSPAN3-205ENST00000558745 ECE2O60344 883 aa17.34■□□□□ 0.37
TSPAN3-205ENST00000558745 POTEIP0CG38 1075 aa17.34■□□□□ 0.37
TSPAN3-205ENST00000558745 POTEJP0CG39 1038 aa17.34■□□□□ 0.37
TSPAN3-205ENST00000558745 RFX5P48382 616 aaPredicted RBP17.34■□□□□ 0.37
TSPAN3-205ENST00000558745 C16orf71Q8IYS4 520 aaPredicted RBP17.34■□□□□ 0.37
TSPAN3-205ENST00000558745 GPC2Q8N158 579 aa17.34■□□□□ 0.37
TSPAN3-205ENST00000558745 ANKRD2Q9GZV1 360 aa17.34■□□□□ 0.37
TSPAN3-205ENST00000558745 ZNF804BA4D1E1 1349 aa17.33■□□□□ 0.37
TSPAN3-205ENST00000558745 G3V3G9 751 aa17.33■□□□□ 0.36
TSPAN3-205ENST00000558745 DCAF8Q5TAQ9 597 aa17.33■□□□□ 0.36
TSPAN3-205ENST00000558745 CIAPIN1Q6FI81 312 aa17.33■□□□□ 0.36
TSPAN3-205ENST00000558745 FTSJ3Q8IY81 847 aaKnown RBP17.33■□□□□ 0.36
TSPAN3-205ENST00000558745 L3MBTL3Q96JM7 780 aaPredicted RBP17.33■□□□□ 0.36
TSPAN3-205ENST00000558745 LEMD3Q9Y2U8 911 aa17.33■□□□□ 0.36
TSPAN3-205ENST00000558745 ZBTB12Q9Y330 459 aaPredicted RBP17.33■□□□□ 0.36
TSPAN3-205ENST00000558745 PSMD14O00487 310 aa17.32■□□□□ 0.36
TSPAN3-205ENST00000558745 EPS15P42566 896 aa17.32■□□□□ 0.36
TSPAN3-205ENST00000558745 FSTL1Q12841 308 aa17.32■□□□□ 0.36
TSPAN3-205ENST00000558745 PCDH10Q9P2E7 1040 aa17.32■□□□□ 0.36
TSPAN3-205ENST00000558745 RIPOR2Q9Y4F9 1068 aa17.32■□□□□ 0.36
TSPAN3-205ENST00000558745 SHTN1A0MZ66 631 aa17.31■□□□□ 0.36
TSPAN3-205ENST00000558745 GNAI3P08754 354 aa17.31■□□□□ 0.36
TSPAN3-205ENST00000558745 KCNJ4P48050 445 aa17.31■□□□□ 0.36
TSPAN3-205ENST00000558745 SCNN1DP51172 638 aa17.31■□□□□ 0.36
TSPAN3-205ENST00000558745 PTPN12Q05209 780 aaKnown RBP17.31■□□□□ 0.36
TSPAN3-205ENST00000558745 ITPRIPQ8IWB1 547 aa17.31■□□□□ 0.36
TSPAN3-205ENST00000558745 TAF1DQ9H5J8 278 aaPredicted RBP17.31■□□□□ 0.36
TSPAN3-205ENST00000558745 C1orf115Q9H7X2 142 aa17.31■□□□□ 0.36
TSPAN3-205ENST00000558745 PA2G4Q9UQ80 394 aaKnown RBP17.31■□□□□ 0.36
TSPAN3-205ENST00000558745 GMPSP49915 693 aaPredicted RBP17.3■□□□□ 0.36
TSPAN3-205ENST00000558745 SIL1Q9H173 461 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms