RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 WAPLQ7Z5K2 1190 aa9.05□□□□□ -0.96
MARK3-212ENST00000558223 KCNB2Q92953 911 aa9.05□□□□□ -0.96
MARK3-212ENST00000558223 PLEKHF1Q96S99 279 aa9.05□□□□□ -0.96
MARK3-212ENST00000558223 PRKD2Q9BZL6 878 aa9.05□□□□□ -0.96
MARK3-212ENST00000558223 ACBD3Q9H3P7 528 aa9.05□□□□□ -0.96
MARK3-212ENST00000558223 PIF1Q9H611 641 aa9.05□□□□□ -0.96
MARK3-212ENST00000558223 PARP2Q9UGN5 583 aa9.05□□□□□ -0.96
MARK3-212ENST00000558223 SEPT3Q9UH03 358 aa9.05□□□□□ -0.96
MARK3-212ENST00000558223 SUGT1Q9Y2Z0 365 aa9.05□□□□□ -0.96
MARK3-212ENST00000558223 ANKRD26Q9UPS8 1709 aa9.05□□□□□ -0.96
MARK3-212ENST00000558223 DIP2AQ14689 1571 aa9.04□□□□□ -0.96
MARK3-212ENST00000558223 ARHGAP23Q9P227 1491 aa9.04□□□□□ -0.96
MARK3-212ENST00000558223 SLC10A3P09131 477 aa9.04□□□□□ -0.96
MARK3-212ENST00000558223 ZNF76P36508 570 aa9.04□□□□□ -0.96
MARK3-212ENST00000558223 RARSP54136 660 aaKnown RBP9.04□□□□□ -0.96
MARK3-212ENST00000558223 TMC7Q7Z402 723 aa9.04□□□□□ -0.96
MARK3-212ENST00000558223 SIX5Q8N196 739 aa9.04□□□□□ -0.96
MARK3-212ENST00000558223 ZCRB1Q8TBF4 217 aaKnown RBP9.04□□□□□ -0.96
MARK3-212ENST00000558223 FAM161BQ96MY7 647 aa9.04□□□□□ -0.96
MARK3-212ENST00000558223 ANP32EQ9BTT0 268 aa9.04□□□□□ -0.96
MARK3-212ENST00000558223 MKNK1Q9BUB5 465 aa9.04□□□□□ -0.96
MARK3-212ENST00000558223 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.04□□□□□ -0.96
MARK3-212ENST00000558223 VTI1BQ9UEU0 232 aa9.04□□□□□ -0.96
MARK3-212ENST00000558223 TTC21AQ8NDW8 1320 aa9.04□□□□□ -0.96
MARK3-212ENST00000558223 ADGRB2O60241 1585 aa9.03□□□□□ -0.96
MARK3-212ENST00000558223 SETD1AO15047 1707 aaKnown RBP9.03□□□□□ -0.96
MARK3-212ENST00000558223 TPD52L2O43399 206 aaKnown RBP9.03□□□□□ -0.96
MARK3-212ENST00000558223 ZPR1O75312 459 aa9.03□□□□□ -0.96
MARK3-212ENST00000558223 RBL2Q08999 1139 aa9.03□□□□□ -0.96
MARK3-212ENST00000558223 ALDH1L2Q3SY69 923 aa9.03□□□□□ -0.96
MARK3-212ENST00000558223 GORABQ5T7V8 394 aa9.03□□□□□ -0.96
MARK3-212ENST00000558223 RNF187Q5TA31 235 aaPredicted RBP9.03□□□□□ -0.96
MARK3-212ENST00000558223 DESI1Q6ICB0 168 aa9.03□□□□□ -0.96
MARK3-212ENST00000558223 TICAM2Q86XR7 235 aa9.03□□□□□ -0.96
MARK3-212ENST00000558223 PHTF2Q8N3S3 785 aa9.03□□□□□ -0.96
MARK3-212ENST00000558223 GMLQ99445 158 aa9.03□□□□□ -0.96
MARK3-212ENST00000558223 RBCK1Q9BYM8 510 aa9.03□□□□□ -0.96
MARK3-212ENST00000558223 POLKQ9UBT6 870 aa9.03□□□□□ -0.96
MARK3-212ENST00000558223 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.03□□□□□ -0.96
MARK3-212ENST00000558223 PCDHB3Q9Y5E6 796 aa9.03□□□□□ -0.96
MARK3-212ENST00000558223 PTCH1Q13635 1447 aa9.03□□□□□ -0.96
MARK3-212ENST00000558223 ADAMTS13Q76LX8 1427 aa9.03□□□□□ -0.96
MARK3-212ENST00000558223 SHPRHQ149N8 1683 aa9.03□□□□□ -0.96
MARK3-212ENST00000558223 KDM2BQ8NHM5 1336 aa9.03□□□□□ -0.96
MARK3-212ENST00000558223 COL3A1P02461 1466 aaPredicted RBP9.02□□□□□ -0.96
MARK3-212ENST00000558223 CDK12Q9NYV4 1490 aaPredicted RBP9.02□□□□□ -0.96
MARK3-212ENST00000558223 NRXN3Q9Y4C0 1643 aa9.02□□□□□ -0.96
MARK3-212ENST00000558223 NDUFB5O43674 189 aa9.02□□□□□ -0.97
MARK3-212ENST00000558223 PLIN1O60240 522 aa9.02□□□□□ -0.97
MARK3-212ENST00000558223 PTCD1O75127 700 aaKnown RBP9.02□□□□□ -0.97
MARK3-212ENST00000558223 LDHBP07195 334 aaKnown RBP9.02□□□□□ -0.97
MARK3-212ENST00000558223 ARID5AQ03989 594 aa9.02□□□□□ -0.97
MARK3-212ENST00000558223 PSMD2Q13200 908 aa9.02□□□□□ -0.97
MARK3-212ENST00000558223 ZKSCAN2Q63HK3 967 aa9.02□□□□□ -0.97
MARK3-212ENST00000558223 BLOC1S3Q6QNY0 202 aa9.02□□□□□ -0.97
MARK3-212ENST00000558223 RETREG3Q86VR2 466 aa9.02□□□□□ -0.97
MARK3-212ENST00000558223 HINFPQ9BQA5 517 aa9.02□□□□□ -0.97
MARK3-212ENST00000558223 PRR14Q9BWN1 585 aa9.02□□□□□ -0.97
MARK3-212ENST00000558223 PCDHB9Q9Y5E1 797 aa9.02□□□□□ -0.97
MARK3-212ENST00000558223 UBR1Q8IWV7 1749 aa9.02□□□□□ -0.97
MARK3-212ENST00000558223 KIF16BQ96L93 1317 aa9.02□□□□□ -0.97
MARK3-212ENST00000558223 SENP3-EIF4A1A0A087X0R7 540 aa9.01□□□□□ -0.97
MARK3-212ENST00000558223 ACTN4O43707 911 aaKnown RBP9.01□□□□□ -0.97
MARK3-212ENST00000558223 PRPF40AO75400 957 aaKnown RBP9.01□□□□□ -0.97
MARK3-212ENST00000558223 MAPK8P45983 427 aa9.01□□□□□ -0.97
MARK3-212ENST00000558223 TNNI2P48788 182 aa9.01□□□□□ -0.97
MARK3-212ENST00000558223 RIPK4P57078 832 aa9.01□□□□□ -0.97
MARK3-212ENST00000558223 GNAI1P63096 354 aa9.01□□□□□ -0.97
MARK3-212ENST00000558223 FUT2Q10981 343 aa9.01□□□□□ -0.97
MARK3-212ENST00000558223 CCDC102BQ68D86 513 aa9.01□□□□□ -0.97
MARK3-212ENST00000558223 LYPD8Q6UX82 237 aa9.01□□□□□ -0.97
MARK3-212ENST00000558223 TMC4Q7Z404 712 aa9.01□□□□□ -0.97
MARK3-212ENST00000558223 NLGN1Q8N2Q7 840 aa9.01□□□□□ -0.97
MARK3-212ENST00000558223 DUSP9Q99956 384 aaKnown RBP9.01□□□□□ -0.97
MARK3-212ENST00000558223 OSBPL2Q9H1P3 480 aa9.01□□□□□ -0.97
MARK3-212ENST00000558223 RWDD1Q9H446 243 aaPredicted RBP9.01□□□□□ -0.97
MARK3-212ENST00000558223 KLHL42Q9P2K6 505 aa9.01□□□□□ -0.97
MARK3-212ENST00000558223 NOP58Q9Y2X3 529 aaKnown RBP9.01□□□□□ -0.97
MARK3-212ENST00000558223 KIF24Q5T7B8 1368 aa9□□□□□ -0.97
MARK3-212ENST00000558223 ANKARQ7Z5J8 1434 aa9□□□□□ -0.97
MARK3-212ENST00000558223 FAM13AO94988 1023 aa9□□□□□ -0.97
MARK3-212ENST00000558223 PLCB3Q01970 1234 aa9□□□□□ -0.97
MARK3-212ENST00000558223 FMR1Q06787 632 aaKnown RBP eCLIP9□□□□□ -0.97
MARK3-212ENST00000558223 TCEAL1Q15170 157 aa9□□□□□ -0.97
MARK3-212ENST00000558223 NFE2L2Q16236 605 aa9□□□□□ -0.97
MARK3-212ENST00000558223 ARHGAP45Q92619 1136 aa9□□□□□ -0.97
MARK3-212ENST00000558223 VTI1AQ96AJ9 217 aa9□□□□□ -0.97
MARK3-212ENST00000558223 IPO9Q96P70 1041 aaKnown RBP9□□□□□ -0.97
MARK3-212ENST00000558223 TTC21BQ7Z4L5 1316 aa9□□□□□ -0.97
MARK3-212ENST00000558223 SFI1A8K8P3 1242 aa8.99□□□□□ -0.97
MARK3-212ENST00000558223 ZBTB7BO15156 539 aaPredicted RBP8.99□□□□□ -0.97
MARK3-212ENST00000558223 TREHO43280 583 aa8.99□□□□□ -0.97
MARK3-212ENST00000558223 BCAR3O75815 825 aa8.99□□□□□ -0.97
MARK3-212ENST00000558223 DKK1O94907 266 aa8.99□□□□□ -0.97
MARK3-212ENST00000558223 CFHP08603 1231 aa8.99□□□□□ -0.97
MARK3-212ENST00000558223 LTKP29376 864 aa8.99□□□□□ -0.97
MARK3-212ENST00000558223 IL13P35225 146 aa8.99□□□□□ -0.97
MARK3-212ENST00000558223 VPS37DQ86XT2 251 aa8.99□□□□□ -0.97
MARK3-212ENST00000558223 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.99□□□□□ -0.976e-6■□□□□ 8.8
MARK3-212ENST00000558223 IFT57Q9NWB7 429 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms