RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 UFL1O94874 794 aa18.15■□□□□ 0.5
SNX6-210ENST00000557341 CWF19L2Q2TBE0 894 aaKnown RBP18.15■□□□□ 0.5
SNX6-210ENST00000557341 DEFB115Q30KQ5 88 aa18.15■□□□□ 0.5
SNX6-210ENST00000557341 G2E3Q7L622 706 aa18.15■□□□□ 0.5
SNX6-210ENST00000557341 ANKRD18AQ8IVF6 992 aa18.15■□□□□ 0.5
SNX6-210ENST00000557341 WDR63Q8IWG1 891 aa18.15■□□□□ 0.5
SNX6-210ENST00000557341 ZC3H12CQ9C0D7 883 aaKnown RBP18.15■□□□□ 0.5
SNX6-210ENST00000557341 GGA1Q9UJY5 639 aa18.15■□□□□ 0.5
SNX6-210ENST00000557341 SALL2Q9Y467 1007 aaPredicted RBP18.15■□□□□ 0.5
SNX6-210ENST00000557341 RTL9Q8NET4 1388 aa18.15■□□□□ 0.5
SNX6-210ENST00000557341 H7C1D1 291 aa18.14■□□□□ 0.49
SNX6-210ENST00000557341 TRAF5O00463 557 aa18.14■□□□□ 0.49
SNX6-210ENST00000557341 FLIIQ13045 1269 aa18.14■□□□□ 0.49
SNX6-210ENST00000557341 MICALL2Q8IY33 904 aa18.14■□□□□ 0.49
SNX6-210ENST00000557341 ZC3H15Q8WU90 426 aaKnown RBP18.14■□□□□ 0.49
SNX6-210ENST00000557341 DPF2Q92785 391 aa18.14■□□□□ 0.49
SNX6-210ENST00000557341 GPR101Q96P66 508 aaPredicted RBP18.14■□□□□ 0.49
SNX6-210ENST00000557341 CDC5LQ99459 802 aaKnown RBP18.14■□□□□ 0.49
SNX6-210ENST00000557341 CNOT7Q9UIV1 285 aaKnown RBP18.14■□□□□ 0.49
SNX6-210ENST00000557341 XDHP47989 1333 aa18.14■□□□□ 0.49
SNX6-210ENST00000557341 RPS12P25398 132 aaKnown RBP18.13■□□□□ 0.49
SNX6-210ENST00000557341 FMR1Q06787 632 aaKnown RBP eCLIP18.13■□□□□ 0.49
SNX6-210ENST00000557341 FKBP5Q13451 457 aaPredicted RBP18.13■□□□□ 0.49
SNX6-210ENST00000557341 DOK7Q18PE1 504 aa18.13■□□□□ 0.49
SNX6-210ENST00000557341 TRPM4Q8TD43 1214 aa18.13■□□□□ 0.49
SNX6-210ENST00000557341 ZBTB12Q9Y330 459 aaPredicted RBP18.13■□□□□ 0.49
SNX6-210ENST00000557341 ZNF609O15014 1411 aa18.13■□□□□ 0.49
SNX6-210ENST00000557341 SHTN1A0MZ66 631 aa18.12■□□□□ 0.49
SNX6-210ENST00000557341 G3V3G9 751 aa18.12■□□□□ 0.49
SNX6-210ENST00000557341 DCAF8Q5TAQ9 597 aa18.12■□□□□ 0.49
SNX6-210ENST00000557341 UBE3BQ7Z3V4 1068 aa18.12■□□□□ 0.49
SNX6-210ENST00000557341 TNS4Q8IZW8 715 aa18.12■□□□□ 0.49
SNX6-210ENST00000557341 AIDAQ96BJ3 306 aa18.12■□□□□ 0.49
SNX6-210ENST00000557341 PGAP2Q9UHJ9 254 aa18.12■□□□□ 0.49
SNX6-210ENST00000557341 HIRAP54198 1017 aaPredicted RBP18.11■□□□□ 0.49
SNX6-210ENST00000557341 TTLL11Q8NHH1 800 aa18.11■□□□□ 0.49
SNX6-210ENST00000557341 GLIS2Q9BZE0 524 aaPredicted RBP18.11■□□□□ 0.49
SNX6-210ENST00000557341 MYH16Q9H6N6 1097 aa18.11■□□□□ 0.49
SNX6-210ENST00000557341 WDR33Q9C0J8 1336 aaKnown RBP18.11■□□□□ 0.49
SNX6-210ENST00000557341 FOXN1O15353 648 aa18.1■□□□□ 0.49
SNX6-210ENST00000557341 EXOSC9Q06265 439 aaKnown RBP18.1■□□□□ 0.49
SNX6-210ENST00000557341 GCKRQ14397 625 aa18.1■□□□□ 0.49
SNX6-210ENST00000557341 CST9Q5W186 159 aa18.1■□□□□ 0.49
SNX6-210ENST00000557341 PAXIP1Q6ZW49 1069 aaPredicted RBP18.1■□□□□ 0.49
SNX6-210ENST00000557341 DNAAF4Q8WXU2 420 aa18.1■□□□□ 0.49
SNX6-210ENST00000557341 GREM2Q9H772 168 aa18.1■□□□□ 0.49
SNX6-210ENST00000557341 TLL2Q9Y6L7 1015 aa18.1■□□□□ 0.49
SNX6-210ENST00000557341 ECM29Q5VYK3 1845 aa18.09■□□□□ 0.49
SNX6-210ENST00000557341 MED23Q9ULK4 1368 aa18.09■□□□□ 0.49
SNX6-210ENST00000557341 H7C1W4 665 aa18.09■□□□□ 0.49
SNX6-210ENST00000557341 VAMP4O75379 141 aa18.09■□□□□ 0.49
SNX6-210ENST00000557341 ATP2B4P23634 1241 aa18.09■□□□□ 0.49
SNX6-210ENST00000557341 ECE1P42892 770 aa18.09■□□□□ 0.49
SNX6-210ENST00000557341 CDC37L1Q7L3B6 337 aa18.09■□□□□ 0.49
SNX6-210ENST00000557341 FAM9BQ8IZU0 186 aa18.09■□□□□ 0.49
SNX6-210ENST00000557341 KCNQ5Q9NR82 932 aa18.09■□□□□ 0.49
SNX6-210ENST00000557341 CELF2O95319 508 aaKnown RBP18.08■□□□□ 0.48
SNX6-210ENST00000557341 TBC1D10BQ4KMP7 808 aaPredicted RBP18.08■□□□□ 0.48
SNX6-210ENST00000557341 SAMD7Q7Z3H4 446 aa18.08■□□□□ 0.48
SNX6-210ENST00000557341 LINS1Q8NG48 757 aa18.08■□□□□ 0.48
SNX6-210ENST00000557341 CAPNS2Q96L46 248 aa18.08■□□□□ 0.48
SNX6-210ENST00000557341 PLA2G12BQ9BX93 195 aa18.08■□□□□ 0.48
SNX6-210ENST00000557341 BSDC1Q9NW68 430 aaPredicted RBP18.08■□□□□ 0.48
SNX6-210ENST00000557341 VIL1P09327 827 aaKnown RBP18.07■□□□□ 0.48
SNX6-210ENST00000557341 MAP2K1Q02750 393 aaPredicted RBP18.07■□□□□ 0.48
SNX6-210ENST00000557341 CYP4F22Q6NT55 531 aa18.07■□□□□ 0.48
SNX6-210ENST00000557341 ZNF408Q9H9D4 720 aa18.07■□□□□ 0.48
SNX6-210ENST00000557341 WBP1LQ9NX94 342 aa18.07■□□□□ 0.48
SNX6-210ENST00000557341 EGFRP00533 1210 aa18.06■□□□□ 0.48
SNX6-210ENST00000557341 IGHMBP2P38935 993 aaKnown RBP18.06■□□□□ 0.48
SNX6-210ENST00000557341 CTCFP49711 727 aaPredicted RBP18.06■□□□□ 0.48
SNX6-210ENST00000557341 GRM1Q13255 1194 aa18.06■□□□□ 0.48
SNX6-210ENST00000557341 KIF4BQ2VIQ3 1234 aa18.06■□□□□ 0.48
SNX6-210ENST00000557341 SAPCD2Q86UD0 394 aa18.06■□□□□ 0.48
SNX6-210ENST00000557341 SPINK5Q9NQ38 1064 aaPredicted RBP18.06■□□□□ 0.48
SNX6-210ENST00000557341 MINPP1Q9UNW1 487 aa18.06■□□□□ 0.48
SNX6-210ENST00000557341 CASP7P55210 303 aa18.05■□□□□ 0.48
SNX6-210ENST00000557341 FAM161AQ3B820 660 aa18.05■□□□□ 0.48
SNX6-210ENST00000557341 RSBN1LQ6PCB5 846 aaPredicted RBP18.05■□□□□ 0.48
SNX6-210ENST00000557341 PRDM10Q9NQV6 1147 aa18.05■□□□□ 0.48
SNX6-210ENST00000557341 AKAP11Q9UKA4 1901 aa18.05■□□□□ 0.48
SNX6-210ENST00000557341 ITGA6P23229 1130 aa18.04■□□□□ 0.48
SNX6-210ENST00000557341 CCT4P50991 539 aaKnown RBP18.04■□□□□ 0.48
SNX6-210ENST00000557341 RBM26Q5T8P6 1007 aaKnown RBP18.04■□□□□ 0.48
SNX6-210ENST00000557341 KRT26Q7Z3Y9 468 aa18.04■□□□□ 0.48
SNX6-210ENST00000557341 PODNQ7Z5L7 613 aa18.04■□□□□ 0.48
SNX6-210ENST00000557341 AGBL3Q8NEM8 1001 aa18.04■□□□□ 0.48
SNX6-210ENST00000557341 HHIPL1Q96JK4 782 aa18.04■□□□□ 0.48
SNX6-210ENST00000557341 ARAP2Q8WZ64 1704 aa18.03■□□□□ 0.48
SNX6-210ENST00000557341 USP48Q86UV5 1035 aa18.03■□□□□ 0.48
SNX6-210ENST00000557341 DCPSQ96C86 337 aaKnown RBP18.03■□□□□ 0.48
SNX6-210ENST00000557341 MPHOSPH8Q99549 860 aa18.03■□□□□ 0.48
SNX6-210ENST00000557341 GGA3Q9NZ52 723 aa18.03■□□□□ 0.48
SNX6-210ENST00000557341 PAPPA2Q9BXP8 1791 aa18.02■□□□□ 0.48
SNX6-210ENST00000557341 USP17L3A6NCW0 530 aa18.02■□□□□ 0.48
SNX6-210ENST00000557341 USP17L4A6NCW7 530 aa18.02■□□□□ 0.48
SNX6-210ENST00000557341 F6X3S4 739 aa18.02■□□□□ 0.48
SNX6-210ENST00000557341 CSF1RP07333 972 aa18.02■□□□□ 0.48
SNX6-210ENST00000557341 USP17L1Q7RTZ2 530 aa18.02■□□□□ 0.48
SNX6-210ENST00000557341 LEMD3Q9Y2U8 911 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms