RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 EYA3Q99504 573 aa17.78■□□□□ 0.44
SLIRP-207ENST00000556831 PLA2G12BQ9BX93 195 aa17.78■□□□□ 0.44
SLIRP-207ENST00000556831 RTFDC1Q9BY42 306 aaPredicted RBP17.78■□□□□ 0.44
SLIRP-207ENST00000556831 API5Q9BZZ5 524 aaKnown RBP17.78■□□□□ 0.44
SLIRP-207ENST00000556831 RTL9Q8NET4 1388 aa17.78■□□□□ 0.44
SLIRP-207ENST00000556831 C6orf229H3BNL8 230 aa17.77■□□□□ 0.44
SLIRP-207ENST00000556831 IQCA1LA6NCM1 817 aa17.76■□□□□ 0.43
SLIRP-207ENST00000556831 G3V3G9 751 aa17.76■□□□□ 0.43
SLIRP-207ENST00000556831 VEGFAP15692 232 aaPredicted RBP17.76■□□□□ 0.43
SLIRP-207ENST00000556831 RARSP54136 660 aaKnown RBP17.76■□□□□ 0.43
SLIRP-207ENST00000556831 TAF7LQ5H9L4 462 aa17.76■□□□□ 0.43
SLIRP-207ENST00000556831 EPHA10Q5JZY3 1008 aa17.76■□□□□ 0.43
SLIRP-207ENST00000556831 DCAF8Q5TAQ9 597 aa17.76■□□□□ 0.43
SLIRP-207ENST00000556831 MPHOSPH8Q99549 860 aa17.76■□□□□ 0.43
SLIRP-207ENST00000556831 POLLQ9UGP5 575 aa17.76■□□□□ 0.43
SLIRP-207ENST00000556831 ANKRD18BA2A2Z9 1011 aa17.75■□□□□ 0.43
SLIRP-207ENST00000556831 IPO8O15397 1037 aaKnown RBP17.75■□□□□ 0.43
SLIRP-207ENST00000556831 ITGA6P23229 1130 aa17.75■□□□□ 0.43
SLIRP-207ENST00000556831 CTCFP49711 727 aaPredicted RBP17.75■□□□□ 0.43
SLIRP-207ENST00000556831 CCT4P50991 539 aaKnown RBP17.75■□□□□ 0.43
SLIRP-207ENST00000556831 IFIT5Q13325 482 aaKnown RBP17.75■□□□□ 0.43
SLIRP-207ENST00000556831 WASHC4Q2M389 1173 aa17.75■□□□□ 0.43
SLIRP-207ENST00000556831 NOB1Q9ULX3 412 aaKnown RBP17.75■□□□□ 0.43
SLIRP-207ENST00000556831 PDE4DIPQ5VU43 2346 aa17.75■□□□□ 0.43
SLIRP-207ENST00000556831 XDHP47989 1333 aa17.74■□□□□ 0.43
SLIRP-207ENST00000556831 UFL1O94874 794 aa17.74■□□□□ 0.43
SLIRP-207ENST00000556831 KIAA2012Q0VF49 1180 aa17.74■□□□□ 0.43
SLIRP-207ENST00000556831 CCDC57Q2TAC2 916 aa17.74■□□□□ 0.43
SLIRP-207ENST00000556831 GGA1Q9UJY5 639 aa17.74■□□□□ 0.43
SLIRP-207ENST00000556831 GJA3Q9Y6H8 435 aa17.74■□□□□ 0.43
SLIRP-207ENST00000556831 YDJCA8MPS7 323 aa17.73■□□□□ 0.43
SLIRP-207ENST00000556831 RIMBP2O15034 1052 aa17.73■□□□□ 0.43
SLIRP-207ENST00000556831 LMOD1P29536 600 aaPredicted RBP17.73■□□□□ 0.43
SLIRP-207ENST00000556831 BRPF1P55201 1214 aaPredicted RBP17.73■□□□□ 0.43
SLIRP-207ENST00000556831 FOXO4P98177 505 aa17.73■□□□□ 0.43
SLIRP-207ENST00000556831 GPC2Q8N158 579 aa17.73■□□□□ 0.43
SLIRP-207ENST00000556831 FRAT1Q92837 279 aaPredicted RBP17.73■□□□□ 0.43
SLIRP-207ENST00000556831 ZC3H12CQ9C0D7 883 aaKnown RBP17.73■□□□□ 0.43
SLIRP-207ENST00000556831 BSDC1Q9NW68 430 aaPredicted RBP17.73■□□□□ 0.43
SLIRP-207ENST00000556831 SCN4AP35499 1836 aa17.72■□□□□ 0.43
SLIRP-207ENST00000556831 SCN9AQ15858 1988 aa17.72■□□□□ 0.43
SLIRP-207ENST00000556831 FOXN1O15353 648 aa17.72■□□□□ 0.43
SLIRP-207ENST00000556831 CSF1RP07333 972 aa17.72■□□□□ 0.43
SLIRP-207ENST00000556831 LMBR1LQ6UX01 489 aa17.72■□□□□ 0.43
SLIRP-207ENST00000556831 TBC1D16Q8TBP0 767 aa17.72■□□□□ 0.43
SLIRP-207ENST00000556831 L3MBTL3Q96JM7 780 aaPredicted RBP17.72■□□□□ 0.43
SLIRP-207ENST00000556831 KCNQ5Q9NR82 932 aa17.72■□□□□ 0.43
SLIRP-207ENST00000556831 ZNRF3Q9ULT6 936 aa17.72■□□□□ 0.43
SLIRP-207ENST00000556831 HDAC5Q9UQL6 1122 aa17.72■□□□□ 0.43
SLIRP-207ENST00000556831 A0A1B0GUL6 1792 aa17.71■□□□□ 0.43
SLIRP-207ENST00000556831 ADAMTSL1Q8N6G6 1762 aa17.71■□□□□ 0.43
SLIRP-207ENST00000556831 SHTN1A0MZ66 631 aa17.71■□□□□ 0.43
SLIRP-207ENST00000556831 KCNJ4P48050 445 aa17.71■□□□□ 0.43
SLIRP-207ENST00000556831 CXCL9Q07325 125 aa17.71■□□□□ 0.43
SLIRP-207ENST00000556831 AIDAQ96BJ3 306 aa17.71■□□□□ 0.43
SLIRP-207ENST00000556831 KAZALD1Q96I82 304 aa17.71■□□□□ 0.43
SLIRP-207ENST00000556831 ANKRD2Q9GZV1 360 aa17.71■□□□□ 0.43
SLIRP-207ENST00000556831 DBNDD1Q9H9R9 158 aa17.71■□□□□ 0.43
SLIRP-207ENST00000556831 PODXL2Q9NZ53 605 aa17.71■□□□□ 0.43
SLIRP-207ENST00000556831 RAD17O75943 681 aa17.7■□□□□ 0.42
SLIRP-207ENST00000556831 NBPF7P0C2Y1 421 aaPredicted RBP17.7■□□□□ 0.42
SLIRP-207ENST00000556831 ATP2B4P23634 1241 aa17.7■□□□□ 0.42
SLIRP-207ENST00000556831 SCNN1DP51172 638 aa17.7■□□□□ 0.42
SLIRP-207ENST00000556831 TNIP1Q15025 636 aa17.7■□□□□ 0.42
SLIRP-207ENST00000556831 DOK7Q18PE1 504 aa17.7■□□□□ 0.42
SLIRP-207ENST00000556831 ARHGAP45Q92619 1136 aa17.7■□□□□ 0.42
SLIRP-207ENST00000556831 SUCLG2Q96I99 432 aa17.7■□□□□ 0.42
SLIRP-207ENST00000556831 TAF1DQ9H5J8 278 aaPredicted RBP17.7■□□□□ 0.42
SLIRP-207ENST00000556831 HACL1Q9UJ83 578 aa17.7■□□□□ 0.42
SLIRP-207ENST00000556831 TNNQ9UQP3 1299 aa17.7■□□□□ 0.42
SLIRP-207ENST00000556831 MINPP1Q9UNW1 487 aa17.69■□□□□ 0.42
SLIRP-207ENST00000556831 UTYO14607 1347 aa17.69■□□□□ 0.42
SLIRP-207ENST00000556831 SNAP23O00161 211 aa17.68■□□□□ 0.42
SLIRP-207ENST00000556831 UBTFL1P0CB47 393 aaPredicted RBP17.68■□□□□ 0.42
SLIRP-207ENST00000556831 EPS15P42566 896 aa17.68■□□□□ 0.42
SLIRP-207ENST00000556831 CIAPIN1Q6FI81 312 aa17.68■□□□□ 0.42
SLIRP-207ENST00000556831 ZNF594Q96JF6 807 aaPredicted RBP17.68■□□□□ 0.42
SLIRP-207ENST00000556831 CNNM1Q9NRU3 951 aa17.68■□□□□ 0.42
SLIRP-207ENST00000556831 KLRK1P26718 216 aa17.67■□□□□ 0.42
SLIRP-207ENST00000556831 ZKSCAN2Q63HK3 967 aa17.67■□□□□ 0.42
SLIRP-207ENST00000556831 BICC1Q9H694 974 aaKnown RBP17.67■□□□□ 0.42
SLIRP-207ENST00000556831 ZNF646O15015 1829 aaPredicted RBP17.66■□□□□ 0.42
SLIRP-207ENST00000556831 ECE2O60344 883 aa17.66■□□□□ 0.42
SLIRP-207ENST00000556831 BCAR3O75815 825 aa17.66■□□□□ 0.42
SLIRP-207ENST00000556831 EPHX2P34913 555 aa17.66■□□□□ 0.42
SLIRP-207ENST00000556831 EAPPQ56P03 285 aaPredicted RBP17.66■□□□□ 0.42
SLIRP-207ENST00000556831 ATF7IPQ6VMQ6 1270 aa17.66■□□□□ 0.42
SLIRP-207ENST00000556831 LDHAL6AQ6ZMR3 332 aa17.66■□□□□ 0.42
SLIRP-207ENST00000556831 FTSJ3Q8IY81 847 aaKnown RBP17.66■□□□□ 0.42
SLIRP-207ENST00000556831 LEMD3Q9Y2U8 911 aa17.66■□□□□ 0.42
SLIRP-207ENST00000556831 ZBTB12Q9Y330 459 aaPredicted RBP17.66■□□□□ 0.42
SLIRP-207ENST00000556831 TNRC18O15417 2968 aaPredicted RBP17.65■□□□□ 0.42
SLIRP-207ENST00000556831 GMPSP49915 693 aaPredicted RBP17.65■□□□□ 0.42
SLIRP-207ENST00000556831 PNMA8AQ86V59 439 aaPredicted RBP17.65■□□□□ 0.42
SLIRP-207ENST00000556831 TXNRD3Q86VQ6 643 aa17.65■□□□□ 0.42
SLIRP-207ENST00000556831 USP44Q9H0E7 712 aa17.65■□□□□ 0.42
SLIRP-207ENST00000556831 CLEC11AQ9Y240 323 aa17.65■□□□□ 0.42
SLIRP-207ENST00000556831 MED23Q9ULK4 1368 aa17.65■□□□□ 0.42
SLIRP-207ENST00000556831 CCDC85CA6NKD9 419 aa17.64■□□□□ 0.41
SLIRP-207ENST00000556831 FMR1Q06787 632 aaKnown RBP eCLIP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms