RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-223ENST00000556142 CCNL1Q9UK58 526 aaPredicted RBP11.54□□□□□ -0.56
HNRNPC-223ENST00000556142 RIPOR2Q9Y4F9 1068 aa11.54□□□□□ -0.56
HNRNPC-223ENST00000556142 PNPLA7Q6ZV29 1317 aa11.54□□□□□ -0.56
HNRNPC-223ENST00000556142 SH3TC1Q8TE82 1336 aa11.54□□□□□ -0.56
HNRNPC-223ENST00000556142 COL24A1Q17RW2 1714 aa11.54□□□□□ -0.56
HNRNPC-223ENST00000556142 SGSM2O43147 1006 aa11.54□□□□□ -0.56
HNRNPC-223ENST00000556142 ITGA6P23229 1130 aa11.54□□□□□ -0.56
HNRNPC-223ENST00000556142 IFIT5Q13325 482 aaKnown RBP11.54□□□□□ -0.56
HNRNPC-223ENST00000556142 BECN1Q14457 450 aa11.54□□□□□ -0.56
HNRNPC-223ENST00000556142 SMIM5Q71RC9 77 aa11.54□□□□□ -0.56
HNRNPC-223ENST00000556142 AMIGO3Q86WK7 504 aa11.54□□□□□ -0.56
HNRNPC-223ENST00000556142 BOLA2Q9H3K6 86 aa11.54□□□□□ -0.56
HNRNPC-223ENST00000556142 GPBP1L1Q9HC44 474 aaPredicted RBP11.54□□□□□ -0.56
HNRNPC-223ENST00000556142 NARFQ9UHQ1 456 aa11.54□□□□□ -0.56
HNRNPC-223ENST00000556142 ZNF609O15014 1411 aa11.53□□□□□ -0.56
HNRNPC-223ENST00000556142 QSER1Q2KHR3 1735 aa11.53□□□□□ -0.56
HNRNPC-223ENST00000556142 TIMM10P62072 90 aa11.53□□□□□ -0.56
HNRNPC-223ENST00000556142 CCDC85AQ96PX6 553 aaPredicted RBP11.53□□□□□ -0.56
HNRNPC-223ENST00000556142 SNRKQ9NRH2 765 aa11.53□□□□□ -0.56
HNRNPC-223ENST00000556142 TFCP2L1Q9NZI6 479 aa11.53□□□□□ -0.56
HNRNPC-223ENST00000556142 NIP7Q9Y221 180 aaKnown RBP eCLIP11.53□□□□□ -0.56
HNRNPC-223ENST00000556142 ANKRD18BA2A2Z9 1011 aa11.52□□□□□ -0.57
HNRNPC-223ENST00000556142 SLC27A3Q5K4L6 730 aa11.52□□□□□ -0.57
HNRNPC-223ENST00000556142 VGLL2Q8N8G2 317 aa11.52□□□□□ -0.57
HNRNPC-223ENST00000556142 HAUS7Q99871 368 aa11.52□□□□□ -0.57
HNRNPC-223ENST00000556142 ZNF652Q9Y2D9 606 aa11.52□□□□□ -0.57
HNRNPC-223ENST00000556142 RIC1Q4ADV7 1423 aa11.52□□□□□ -0.57
HNRNPC-223ENST00000556142 RTL9Q8NET4 1388 aa11.52□□□□□ -0.57
HNRNPC-223ENST00000556142 HCLS1P14317 486 aaPredicted RBP11.51□□□□□ -0.57
HNRNPC-223ENST00000556142 SLC10A5Q5PT55 438 aa11.51□□□□□ -0.57
HNRNPC-223ENST00000556142 TBC1D9BQ66K14 1250 aa11.51□□□□□ -0.57
HNRNPC-223ENST00000556142 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.51□□□□□ -0.57
HNRNPC-223ENST00000556142 ARHGEF1Q92888 912 aaKnown RBP11.51□□□□□ -0.57
HNRNPC-223ENST00000556142 LSG1Q9H089 658 aaKnown RBP11.51□□□□□ -0.57
HNRNPC-223ENST00000556142 CEP126Q9P2H0 1117 aa11.51□□□□□ -0.57
HNRNPC-223ENST00000556142 SCN7AQ01118 1682 aa11.5□□□□□ -0.57
HNRNPC-223ENST00000556142 TAF1LQ8IZX4 1826 aa11.5□□□□□ -0.57
HNRNPC-223ENST00000556142 A0A1B0GUL7 405 aa11.5□□□□□ -0.57
HNRNPC-223ENST00000556142 CD2BP2O95400 341 aaKnown RBP11.5□□□□□ -0.57
HNRNPC-223ENST00000556142 USPL1Q5W0Q7 1092 aa11.5□□□□□ -0.57
HNRNPC-223ENST00000556142 SRP68Q9UHB9 627 aaKnown RBP11.5□□□□□ -0.57
HNRNPC-223ENST00000556142 RTCBQ9Y3I0 505 aaKnown RBP11.5□□□□□ -0.57
HNRNPC-223ENST00000556142 DDX60Q8IY21 1712 aaKnown RBP11.5□□□□□ -0.57
HNRNPC-223ENST00000556142 GNPATO15228 680 aa11.5□□□□□ -0.57
HNRNPC-223ENST00000556142 RABEP1Q15276 862 aa11.5□□□□□ -0.57
HNRNPC-223ENST00000556142 ERICH6Q7L0X2 663 aa11.5□□□□□ -0.57
HNRNPC-223ENST00000556142 EDC3Q96F86 508 aaKnown RBP11.5□□□□□ -0.57
HNRNPC-223ENST00000556142 ANTXR1Q9H6X2 564 aa11.5□□□□□ -0.57
HNRNPC-223ENST00000556142 AKAP2Q9Y2D5 859 aa11.5□□□□□ -0.57
HNRNPC-223ENST00000556142 C4BP0C0L5 1744 aa11.49□□□□□ -0.57
HNRNPC-223ENST00000556142 FAM177BA6PVY3 158 aa11.49□□□□□ -0.57
HNRNPC-223ENST00000556142 HIP1O00291 1037 aa11.49□□□□□ -0.57
HNRNPC-223ENST00000556142 ADORA1P30542 326 aa11.49□□□□□ -0.57
HNRNPC-223ENST00000556142 HSPA4P34932 840 aa11.49□□□□□ -0.57
HNRNPC-223ENST00000556142 SF3B3Q15393 1217 aaKnown RBP11.49□□□□□ -0.57
HNRNPC-223ENST00000556142 ERFEQ4G0M1 354 aa11.49□□□□□ -0.57
HNRNPC-223ENST00000556142 TAF7LQ5H9L4 462 aa11.49□□□□□ -0.57
HNRNPC-223ENST00000556142 CWC27Q6UX04 472 aaKnown RBP11.49□□□□□ -0.57
HNRNPC-223ENST00000556142 LDHAL6AQ6ZMR3 332 aa11.49□□□□□ -0.57
HNRNPC-223ENST00000556142 ZNF526Q8TF50 670 aaPredicted RBP11.49□□□□□ -0.57
HNRNPC-223ENST00000556142 NEUROD6Q96NK8 337 aa11.49□□□□□ -0.57
HNRNPC-223ENST00000556142 DAXXQ9UER7 740 aaPredicted RBP11.49□□□□□ -0.57
HNRNPC-223ENST00000556142 PALD1Q9ULE6 856 aa11.49□□□□□ -0.57
HNRNPC-223ENST00000556142 RFX7Q2KHR2 1363 aa11.48□□□□□ -0.57
HNRNPC-223ENST00000556142 HSP90B1P14625 803 aaKnown RBP11.48□□□□□ -0.57
HNRNPC-223ENST00000556142 FGFR2P21802 821 aa11.48□□□□□ -0.57
HNRNPC-223ENST00000556142 ANAPC15P60006 121 aa11.48□□□□□ -0.57
HNRNPC-223ENST00000556142 NMIQ13287 307 aaPredicted RBP11.48□□□□□ -0.57
HNRNPC-223ENST00000556142 C3orf67Q6ZVT6 689 aa11.48□□□□□ -0.57
HNRNPC-223ENST00000556142 TICAM2Q86XR7 235 aa11.48□□□□□ -0.57
HNRNPC-223ENST00000556142 RUFY2Q8WXA3 655 aa11.48□□□□□ -0.57
HNRNPC-223ENST00000556142 KCNB2Q92953 911 aa11.48□□□□□ -0.57
HNRNPC-223ENST00000556142 XAGE2Q96GT9 111 aa11.48□□□□□ -0.57
HNRNPC-223ENST00000556142 FAM227BQ96M60 508 aa11.48□□□□□ -0.57
HNRNPC-223ENST00000556142 ANP32EQ9BTT0 268 aa11.48□□□□□ -0.57
HNRNPC-223ENST00000556142 ANO2Q9NQ90 1003 aa11.48□□□□□ -0.57
HNRNPC-223ENST00000556142 SEC31BQ9NQW1 1179 aa11.48□□□□□ -0.57
HNRNPC-223ENST00000556142 ZBTB12Q9Y330 459 aaPredicted RBP11.48□□□□□ -0.57
HNRNPC-223ENST00000556142 LAMB2P55268 1798 aa11.48□□□□□ -0.57
HNRNPC-223ENST00000556142 RAD50Q92878 1312 aa11.47□□□□□ -0.57
HNRNPC-223ENST00000556142 MYH3P11055 1940 aa11.47□□□□□ -0.57
HNRNPC-223ENST00000556142 PDE8BO95263 885 aa11.47□□□□□ -0.57
HNRNPC-223ENST00000556142 CCDC152Q4G0S7 254 aa11.47□□□□□ -0.57
HNRNPC-223ENST00000556142 METTL24Q5JXM2 366 aa11.47□□□□□ -0.57
HNRNPC-223ENST00000556142 TRAPPC3LQ5T215 181 aa11.47□□□□□ -0.57
HNRNPC-223ENST00000556142 DIAPH3Q9NSV4 1193 aa11.47□□□□□ -0.57
HNRNPC-223ENST00000556142 NDUFB9Q9Y6M9 179 aa11.47□□□□□ -0.57
HNRNPC-223ENST00000556142 A0A0D9SFI3 127 aa11.46□□□□□ -0.57
HNRNPC-223ENST00000556142 ZPR1O75312 459 aa11.46□□□□□ -0.57
HNRNPC-223ENST00000556142 DDIT3P35638 169 aa11.46□□□□□ -0.57
HNRNPC-223ENST00000556142 PTH1RQ03431 593 aa11.46□□□□□ -0.57
HNRNPC-223ENST00000556142 HSCBQ8IWL3 235 aa11.46□□□□□ -0.57
HNRNPC-223ENST00000556142 KBTBD3Q8NAB2 608 aa11.46□□□□□ -0.57
HNRNPC-223ENST00000556142 ZNF512BQ96KM6 892 aaPredicted RBP11.46□□□□□ -0.57
HNRNPC-223ENST00000556142 FSD1Q9BTV5 496 aa11.46□□□□□ -0.57
HNRNPC-223ENST00000556142 CNNM1Q9NRU3 951 aa11.46□□□□□ -0.57
HNRNPC-223ENST00000556142 MED23Q9ULK4 1368 aa11.46□□□□□ -0.57
HNRNPC-223ENST00000556142 COL4A1P02462 1669 aa11.46□□□□□ -0.57
HNRNPC-223ENST00000556142 MROH5Q6ZUA9 1318 aa11.46□□□□□ -0.58
HNRNPC-223ENST00000556142 AK9Q5TCS8 1911 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms