RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 FCHSD1Q86WN1 690 aa5.72□□□□□ -1.49
SRP54-209ENST00000555746 GOLGA6L1Q8N7Z2 621 aa5.72□□□□□ -1.49
SRP54-209ENST00000555746 SETDB2Q96T68 719 aa5.72□□□□□ -1.49
SRP54-209ENST00000555746 DNAJB12Q9NXW2 375 aaKnown RBP5.72□□□□□ -1.49
SRP54-209ENST00000555746 GDF2Q9UK05 429 aaPredicted RBP5.72□□□□□ -1.49
SRP54-209ENST00000555746 LOC102724428A0A0B4J2F2 783 aa5.71□□□□□ -1.5
SRP54-209ENST00000555746 UNCXA6NJT0 531 aa5.71□□□□□ -1.5
SRP54-209ENST00000555746 WFS1O76024 890 aa5.71□□□□□ -1.5
SRP54-209ENST00000555746 SLURP2P0DP57 97 aa5.71□□□□□ -1.5
SRP54-209ENST00000555746 VAMP1P23763 118 aa5.71□□□□□ -1.5
SRP54-209ENST00000555746 SIK1P57059 783 aa5.71□□□□□ -1.5
SRP54-209ENST00000555746 DAB2P98082 770 aa5.71□□□□□ -1.5
SRP54-209ENST00000555746 LCE2AQ5TA79 106 aaPredicted RBP5.71□□□□□ -1.5
SRP54-209ENST00000555746 KIAA0319Q5VV43 1072 aa5.71□□□□□ -1.5
SRP54-209ENST00000555746 PEAR1Q5VY43 1037 aaPredicted RBP5.71□□□□□ -1.5
SRP54-209ENST00000555746 TMC4Q7Z404 712 aa5.71□□□□□ -1.5
SRP54-209ENST00000555746 CEP120Q8N960 986 aa5.71□□□□□ -1.5
SRP54-209ENST00000555746 ZNF775Q96BV0 537 aaPredicted RBP5.71□□□□□ -1.5
SRP54-209ENST00000555746 CNTNAP3BQ96NU0 1288 aa5.71□□□□□ -1.5
SRP54-209ENST00000555746 DUSP9Q99956 384 aaKnown RBP5.71□□□□□ -1.5
SRP54-209ENST00000555746 OXCT2Q9BYC2 517 aaPredicted RBP5.71□□□□□ -1.5
SRP54-209ENST00000555746 CNTNAP3Q9BZ76 1288 aa5.71□□□□□ -1.5
SRP54-209ENST00000555746 NPHS2Q9NP85 383 aa5.71□□□□□ -1.5
SRP54-209ENST00000555746 KANSL3Q9P2N6 904 aa5.71□□□□□ -1.5
SRP54-209ENST00000555746 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.71□□□□□ -1.5
SRP54-209ENST00000555746 ELOA3CA0A087WX78 387 aaPredicted RBP5.7□□□□□ -1.5
SRP54-209ENST00000555746 ELOA3DA6NLF2 546 aaPredicted RBP5.7□□□□□ -1.5
SRP54-209ENST00000555746 NEURL1BA8MQ27 555 aa5.7□□□□□ -1.5
SRP54-209ENST00000555746 GIPC1O14908 333 aa5.7□□□□□ -1.5
SRP54-209ENST00000555746 ADAMTS2O95450 1211 aa5.7□□□□□ -1.5
SRP54-209ENST00000555746 POLR3DP05423 398 aaPredicted RBP5.7□□□□□ -1.5
SRP54-209ENST00000555746 GNA15P30679 374 aa5.7□□□□□ -1.5
SRP54-209ENST00000555746 MRPL58Q14197 206 aaKnown RBP5.7□□□□□ -1.5
SRP54-209ENST00000555746 ELOA3BQ3SY89 546 aa5.7□□□□□ -1.5
SRP54-209ENST00000555746 ELOA3Q8NG57 546 aa5.7□□□□□ -1.5
SRP54-209ENST00000555746 ACDQ96AP0 544 aa5.7□□□□□ -1.5
SRP54-209ENST00000555746 ZNF428Q96B54 188 aa5.7□□□□□ -1.5
SRP54-209ENST00000555746 UBE2OQ9C0C9 1292 aaKnown RBP5.7□□□□□ -1.5
SRP54-209ENST00000555746 LRRC4BQ9NT99 713 aa5.7□□□□□ -1.5
SRP54-209ENST00000555746 PARP2Q9UGN5 583 aa5.7□□□□□ -1.5
SRP54-209ENST00000555746 GGA1Q9UJY5 639 aa5.7□□□□□ -1.5
SRP54-209ENST00000555746 A0A1W2PP55 124 aa5.69□□□□□ -1.5
SRP54-209ENST00000555746 NFKBIEO00221 500 aa5.69□□□□□ -1.5
SRP54-209ENST00000555746 EPXP11678 715 aa5.69□□□□□ -1.5
SRP54-209ENST00000555746 IRS1P35568 1242 aa5.69□□□□□ -1.5
SRP54-209ENST00000555746 GMPRP36959 345 aa5.69□□□□□ -1.5
SRP54-209ENST00000555746 ITGAEP38570 1179 aa5.69□□□□□ -1.5
SRP54-209ENST00000555746 ADH7P40394 386 aa5.69□□□□□ -1.5
SRP54-209ENST00000555746 RBM25P49756 843 aaKnown RBP5.69□□□□□ -1.5
SRP54-209ENST00000555746 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.69□□□□□ -1.5
SRP54-209ENST00000555746 TREML4Q6UXN2 200 aa5.69□□□□□ -1.5
SRP54-209ENST00000555746 NCAPG2Q86XI2 1143 aa5.69□□□□□ -1.5
SRP54-209ENST00000555746 EPS8L3Q8TE67 593 aaKnown RBP5.69□□□□□ -1.5
SRP54-209ENST00000555746 NSUN5Q96P11 429 aaKnown RBP5.69□□□□□ -1.5
SRP54-209ENST00000555746 SRCIN1Q9C0H9 1055 aa5.69□□□□□ -1.5
SRP54-209ENST00000555746 SUV39H2Q9H5I1 410 aa5.69□□□□□ -1.5
SRP54-209ENST00000555746 DZANK1Q9NVP4 752 aa5.69□□□□□ -1.5
SRP54-209ENST00000555746 NLRP2Q9NX02 1062 aa5.69□□□□□ -1.5
SRP54-209ENST00000555746 SLC6A14Q9UN76 642 aa5.69□□□□□ -1.5
SRP54-209ENST00000555746 SPG7Q9UQ90 795 aa5.69□□□□□ -1.5
SRP54-209ENST00000555746 CCDC180Q9P1Z9 1646 aa5.69□□□□□ -1.5
SRP54-209ENST00000555746 XPCQ01831 940 aaPredicted RBP5.68□□□□□ -1.5
SRP54-209ENST00000555746 PRPF40BQ6NWY9 871 aaKnown RBP5.68□□□□□ -1.5
SRP54-209ENST00000555746 PI16Q6UXB8 463 aa5.68□□□□□ -1.5
SRP54-209ENST00000555746 NPM2Q86SE8 214 aaKnown RBP5.68□□□□□ -1.5
SRP54-209ENST00000555746 MRRFQ96E11 262 aaKnown RBP5.68□□□□□ -1.5
SRP54-209ENST00000555746 SPACA7Q96KW9 195 aa5.68□□□□□ -1.5
SRP54-209ENST00000555746 BCL11AQ9H165 835 aa5.68□□□□□ -1.5
SRP54-209ENST00000555746 LATS2Q9NRM7 1088 aa5.68□□□□□ -1.5
SRP54-209ENST00000555746 RNF19AQ9NV58 838 aa5.68□□□□□ -1.5
SRP54-209ENST00000555746 FRRS1LQ9P0K9 344 aa5.68□□□□□ -1.5
SRP54-209ENST00000555746 KIAA1522Q9P206 1035 aaPredicted RBP5.68□□□□□ -1.5
SRP54-209ENST00000555746 NAGPAQ9UK23 515 aa5.68□□□□□ -1.5
SRP54-209ENST00000555746 AK5Q9Y6K8 562 aa5.68□□□□□ -1.5
SRP54-209ENST00000555746 J3QW42 95 aa5.67□□□□□ -1.5
SRP54-209ENST00000555746 OIP5O43482 229 aa5.67□□□□□ -1.5
SRP54-209ENST00000555746 GHRHP01286 108 aa5.67□□□□□ -1.5
SRP54-209ENST00000555746 MLLT1Q03111 559 aaPredicted RBP5.67□□□□□ -1.5
SRP54-209ENST00000555746 PSMD2Q13200 908 aa5.67□□□□□ -1.5
SRP54-209ENST00000555746 GRM2Q14416 872 aa5.67□□□□□ -1.5
SRP54-209ENST00000555746 C1orf229Q6ZS94 237 aaPredicted RBP5.67□□□□□ -1.5
SRP54-209ENST00000555746 FAM35AQ86V20 835 aa5.67□□□□□ -1.5
SRP54-209ENST00000555746 TMEM102Q8N9M5 508 aaPredicted RBP5.67□□□□□ -1.5
SRP54-209ENST00000555746 GLIS3Q8NEA6 775 aa5.67□□□□□ -1.5
SRP54-209ENST00000555746 TTC9Q92623 222 aa5.67□□□□□ -1.5
SRP54-209ENST00000555746 LPIN3Q9BQK8 851 aa5.67□□□□□ -1.5
SRP54-209ENST00000555746 ZKSCAN3Q9BRR0 538 aa5.67□□□□□ -1.5
SRP54-209ENST00000555746 OSBPL7Q9BZF2 842 aa5.67□□□□□ -1.5
SRP54-209ENST00000555746 BHLHE41Q9C0J9 482 aaPredicted RBP5.67□□□□□ -1.5
SRP54-209ENST00000555746 IGFLR1Q9H665 355 aa5.67□□□□□ -1.5
SRP54-209ENST00000555746 C12orf49Q9H741 205 aa5.67□□□□□ -1.5
SRP54-209ENST00000555746 TRAK1Q9UPV9 953 aa5.67□□□□□ -1.5
SRP54-209ENST00000555746 UNC13AQ9UPW8 1703 aa5.67□□□□□ -1.5
SRP54-209ENST00000555746 SORBS3O60504 671 aa5.66□□□□□ -1.5
SRP54-209ENST00000555746 ACPPP15309 386 aa5.66□□□□□ -1.5
SRP54-209ENST00000555746 ALAS2P22557 587 aa5.66□□□□□ -1.5
SRP54-209ENST00000555746 TBC1D8BQ0IIM8 1120 aa5.66□□□□□ -1.5
SRP54-209ENST00000555746 PERM1Q5SV97 790 aa5.66□□□□□ -1.5
SRP54-209ENST00000555746 KANK3Q6NY19 840 aa5.66□□□□□ -1.5
SRP54-209ENST00000555746 C20orf204Q6ZNR8 217 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms