RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 LINS1Q8NG48 757 aa20.03■□□□□ 0.8
PPP4R3A-208ENST00000555462 DDX19AQ9NUU7 478 aaKnown RBP20.03■□□□□ 0.8
PPP4R3A-208ENST00000555462 RESTQ13127 1097 aa20.02■□□□□ 0.8
PPP4R3A-208ENST00000555462 PTPN14Q15678 1187 aa20.02■□□□□ 0.8
PPP4R3A-208ENST00000555462 LRRC8AQ8IWT6 810 aa20.02■□□□□ 0.8
PPP4R3A-208ENST00000555462 MON2Q7Z3U7 1717 aa20.02■□□□□ 0.79
PPP4R3A-208ENST00000555462 A0A087WZG4 1122 aa20.02■□□□□ 0.79
PPP4R3A-208ENST00000555462 MARCKSP29966 332 aaPredicted RBP20.02■□□□□ 0.79
PPP4R3A-208ENST00000555462 CABLES1Q8TDN4 633 aa20.02■□□□□ 0.79
PPP4R3A-208ENST00000555462 ANKRD24Q8TF21 1146 aa20.02■□□□□ 0.79
PPP4R3A-208ENST00000555462 IP6K1Q92551 441 aa20.02■□□□□ 0.79
PPP4R3A-208ENST00000555462 PLA2G4DQ86XP0 818 aa20.01■□□□□ 0.79
PPP4R3A-208ENST00000555462 EPC1Q9H2F5 836 aa20.01■□□□□ 0.79
PPP4R3A-208ENST00000555462 LMOD1P29536 600 aaPredicted RBP20.01■□□□□ 0.79
PPP4R3A-208ENST00000555462 ZRSR1Q15695 479 aaKnown RBP20.01■□□□□ 0.79
PPP4R3A-208ENST00000555462 LMBR1LQ6UX01 489 aa20.01■□□□□ 0.79
PPP4R3A-208ENST00000555462 RGPD8O14715 1765 aaPredicted RBP20■□□□□ 0.79
PPP4R3A-208ENST00000555462 TMC6Q7Z403 805 aa20■□□□□ 0.79
PPP4R3A-208ENST00000555462 ZNF496Q96IT1 587 aaPredicted RBP20■□□□□ 0.79
PPP4R3A-208ENST00000555462 AKAP4Q5JQC9 854 aa20■□□□□ 0.79
PPP4R3A-208ENST00000555462 CSB-PGBD3P0DP91 1061 aa19.99■□□□□ 0.79
PPP4R3A-208ENST00000555462 ANKRD1Q15327 319 aa19.99■□□□□ 0.79
PPP4R3A-208ENST00000555462 TNNI3KQ59H18 835 aa19.99■□□□□ 0.79
PPP4R3A-208ENST00000555462 SIRT1Q96EB6 747 aa19.99■□□□□ 0.79
PPP4R3A-208ENST00000555462 FPGT-TNNI3KV9GXZ4 949 aa19.99■□□□□ 0.79
PPP4R3A-208ENST00000555462 CTDNEP1O95476 244 aa19.99■□□□□ 0.79
PPP4R3A-208ENST00000555462 DDX58O95786 925 aaKnown RBP19.99■□□□□ 0.79
PPP4R3A-208ENST00000555462 DPCR1Q3MIW9 517 aa19.99■□□□□ 0.79
PPP4R3A-208ENST00000555462 ANKRD7Q92527 254 aa19.99■□□□□ 0.79
PPP4R3A-208ENST00000555462 DENND2AQ9ULE3 1009 aa19.99■□□□□ 0.79
PPP4R3A-208ENST00000555462 NEURL1BA8MQ27 555 aa19.98■□□□□ 0.79
PPP4R3A-208ENST00000555462 CHRNA2Q15822 529 aa19.98■□□□□ 0.79
PPP4R3A-208ENST00000555462 WASHC4Q2M389 1173 aa19.98■□□□□ 0.79
PPP4R3A-208ENST00000555462 SYT10Q6XYQ8 523 aa19.98■□□□□ 0.79
PPP4R3A-208ENST00000555462 AIFM3Q96NN9 605 aa19.98■□□□□ 0.79
PPP4R3A-208ENST00000555462 GCKRQ14397 625 aa19.98■□□□□ 0.79
PPP4R3A-208ENST00000555462 ERCC6LQ2NKX8 1250 aa19.98■□□□□ 0.79
PPP4R3A-208ENST00000555462 KMT5BQ4FZB7 885 aa19.98■□□□□ 0.79
PPP4R3A-208ENST00000555462 IFNKQ9P0W0 207 aa19.98■□□□□ 0.79
PPP4R3A-208ENST00000555462 NPHP4O75161 1426 aaPredicted RBP19.98■□□□□ 0.79
PPP4R3A-208ENST00000555462 IQCB1Q15051 598 aa19.98■□□□□ 0.79
PPP4R3A-208ENST00000555462 PI16Q6UXB8 463 aa19.98■□□□□ 0.79
PPP4R3A-208ENST00000555462 HOMER1Q86YM7 354 aa19.98■□□□□ 0.79
PPP4R3A-208ENST00000555462 TDRD7Q8NHU6 1098 aaKnown RBP19.98■□□□□ 0.79
PPP4R3A-208ENST00000555462 SMTNL1A8MU46 457 aa19.97■□□□□ 0.79
PPP4R3A-208ENST00000555462 GCP02774 474 aa19.97■□□□□ 0.79
PPP4R3A-208ENST00000555462 IL17RAQ96F46 866 aa19.97■□□□□ 0.79
PPP4R3A-208ENST00000555462 CTNNA3Q9UI47 895 aa19.97■□□□□ 0.79
PPP4R3A-208ENST00000555462 CLIC4Q9Y696 253 aa19.97■□□□□ 0.79
PPP4R3A-208ENST00000555462 NDUFA8P51970 172 aa19.97■□□□□ 0.79
PPP4R3A-208ENST00000555462 SPECC1Q5M775 1068 aa19.97■□□□□ 0.79
PPP4R3A-208ENST00000555462 XRN1Q8IZH2 1706 aaKnown RBP19.97■□□□□ 0.79
PPP4R3A-208ENST00000555462 NSUN7Q8NE18 718 aaKnown RBP19.97■□□□□ 0.79
PPP4R3A-208ENST00000555462 ZBTB3Q9H5J0 574 aa19.97■□□□□ 0.79
PPP4R3A-208ENST00000555462 ALDH1L1O75891 902 aa19.96■□□□□ 0.79
PPP4R3A-208ENST00000555462 TPM3P06753 285 aa19.96■□□□□ 0.79
PPP4R3A-208ENST00000555462 PDIA6Q15084 440 aa19.96■□□□□ 0.79
PPP4R3A-208ENST00000555462 ANKRD13DQ6ZTN6 518 aa19.96■□□□□ 0.79
PPP4R3A-208ENST00000555462 CCDC82Q8N4S0 544 aa19.96■□□□□ 0.79
PPP4R3A-208ENST00000555462 CTIFO43310 598 aaKnown RBP19.96■□□□□ 0.79
PPP4R3A-208ENST00000555462 PTPN12Q05209 780 aaKnown RBP19.96■□□□□ 0.79
PPP4R3A-208ENST00000555462 FBXO38Q6PIJ6 1188 aa19.96■□□□□ 0.79
PPP4R3A-208ENST00000555462 CFAP45Q9UL16 551 aa19.96■□□□□ 0.79
PPP4R3A-208ENST00000555462 ATP1A3P13637 1013 aa19.95■□□□□ 0.78
PPP4R3A-208ENST00000555462 ATP2B1P20020 1258 aa19.95■□□□□ 0.78
PPP4R3A-208ENST00000555462 LRRC24Q50LG9 513 aa19.95■□□□□ 0.78
PPP4R3A-208ENST00000555462 PODXL2Q9NZ53 605 aa19.95■□□□□ 0.78
PPP4R3A-208ENST00000555462 SETD1AO15047 1707 aaKnown RBP19.95■□□□□ 0.78
PPP4R3A-208ENST00000555462 STK38Q15208 465 aa19.95■□□□□ 0.78
PPP4R3A-208ENST00000555462 MCMDC2Q4G0Z9 681 aa19.95■□□□□ 0.78
PPP4R3A-208ENST00000555462 ZFP91Q96JP5 570 aaPredicted RBP19.95■□□□□ 0.78
PPP4R3A-208ENST00000555462 PCDHA7Q9UN72 937 aa19.95■□□□□ 0.78
PPP4R3A-208ENST00000555462 UBE2Q2LH0YL09 131 aa19.95■□□□□ 0.78
PPP4R3A-208ENST00000555462 HIP1O00291 1037 aa19.95■□□□□ 0.78
PPP4R3A-208ENST00000555462 MTX1Q13505 466 aa19.95■□□□□ 0.78
PPP4R3A-208ENST00000555462 PUS3Q9BZE2 481 aaKnown RBP19.95■□□□□ 0.78
PPP4R3A-208ENST00000555462 XPO4Q9C0E2 1151 aaKnown RBP19.95■□□□□ 0.78
PPP4R3A-208ENST00000555462 DDX21Q9NR30 783 aaKnown RBP eCLIP19.95■□□□□ 0.78
PPP4R3A-208ENST00000555462 PXDNQ92626 1479 aa19.94■□□□□ 0.78
PPP4R3A-208ENST00000555462 ZNF609O15014 1411 aa19.94■□□□□ 0.78
PPP4R3A-208ENST00000555462 DHX40Q8IX18 779 aaKnown RBP19.94■□□□□ 0.78
PPP4R3A-208ENST00000555462 ELP1O95163 1332 aa19.94■□□□□ 0.78
PPP4R3A-208ENST00000555462 STX1AQ16623 288 aa19.94■□□□□ 0.78
PPP4R3A-208ENST00000555462 ZNF790Q6PG37 636 aa19.94■□□□□ 0.78
PPP4R3A-208ENST00000555462 USP42Q9H9J4 1324 aaKnown RBP19.93■□□□□ 0.78
PPP4R3A-208ENST00000555462 ADD1P35611 737 aaKnown RBP19.93■□□□□ 0.78
PPP4R3A-208ENST00000555462 SNW1Q13573 536 aaKnown RBP19.93■□□□□ 0.78
PPP4R3A-208ENST00000555462 POLR3GO15318 223 aaPredicted RBP19.93■□□□□ 0.78
PPP4R3A-208ENST00000555462 CEMIPQ8WUJ3 1361 aa19.93■□□□□ 0.78
PPP4R3A-208ENST00000555462 AKAP12Q02952 1782 aa19.93■□□□□ 0.78
PPP4R3A-208ENST00000555462 CCAR2Q8N163 923 aaKnown RBP19.92■□□□□ 0.78
PPP4R3A-208ENST00000555462 ZSWIM4Q9H7M6 989 aa19.92■□□□□ 0.78
PPP4R3A-208ENST00000555462 INCENPQ9NQS7 918 aa19.92■□□□□ 0.78
PPP4R3A-208ENST00000555462 TECPR2O15040 1411 aa19.92■□□□□ 0.78
PPP4R3A-208ENST00000555462 ILDR1Q86SU0 546 aaPredicted RBP19.92■□□□□ 0.78
PPP4R3A-208ENST00000555462 KCNB2Q92953 911 aa19.92■□□□□ 0.78
PPP4R3A-208ENST00000555462 SRCAPQ6ZRS2 3230 aa19.91■□□□□ 0.78
PPP4R3A-208ENST00000555462 E7EWF7 191 aa19.91■□□□□ 0.78
PPP4R3A-208ENST00000555462 CEP57L1Q8IYX8 460 aa19.91■□□□□ 0.78
PPP4R3A-208ENST00000555462 EPB41L2O43491 1005 aaKnown RBP19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms