RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 FAM161AQ3B820 660 aa18.02■□□□□ 0.48
SPTLC2-202ENST00000554365 WDR63Q8IWG1 891 aa18.02■□□□□ 0.48
SPTLC2-202ENST00000554365 DPF2Q92785 391 aa18.02■□□□□ 0.48
SPTLC2-202ENST00000554365 CDCA7LQ96GN5 454 aa18.02■□□□□ 0.48
SPTLC2-202ENST00000554365 POLLQ9UGP5 575 aa18.02■□□□□ 0.48
SPTLC2-202ENST00000554365 IRS4O14654 1257 aaPredicted RBP18.01■□□□□ 0.47
SPTLC2-202ENST00000554365 ECE2O60344 883 aa18.01■□□□□ 0.47
SPTLC2-202ENST00000554365 HUNKP57058 714 aa18.01■□□□□ 0.47
SPTLC2-202ENST00000554365 RBM26Q5T8P6 1007 aaKnown RBP18.01■□□□□ 0.47
SPTLC2-202ENST00000554365 DUSP27Q5VZP5 1158 aa18.01■□□□□ 0.47
SPTLC2-202ENST00000554365 EYA3Q99504 573 aa18.01■□□□□ 0.47
SPTLC2-202ENST00000554365 KCNQ5Q9NR82 932 aa18.01■□□□□ 0.47
SPTLC2-202ENST00000554365 COL4A1P02462 1669 aa18.01■□□□□ 0.47
SPTLC2-202ENST00000554365 KRT26Q7Z3Y9 468 aa18■□□□□ 0.47
SPTLC2-202ENST00000554365 RIC3Q7Z5B4 369 aa18■□□□□ 0.47
SPTLC2-202ENST00000554365 CFAP44Q96MT7 982 aa18■□□□□ 0.47
SPTLC2-202ENST00000554365 IL16Q14005 1332 aa17.99■□□□□ 0.47
SPTLC2-202ENST00000554365 EGFRP00533 1210 aa17.99■□□□□ 0.47
SPTLC2-202ENST00000554365 RPS12P25398 132 aaKnown RBP17.99■□□□□ 0.47
SPTLC2-202ENST00000554365 RPS8P62241 208 aaKnown RBP17.99■□□□□ 0.47
SPTLC2-202ENST00000554365 GOLGA2Q08379 1002 aa17.99■□□□□ 0.47
SPTLC2-202ENST00000554365 SLFN5Q08AF3 891 aa17.99■□□□□ 0.47
SPTLC2-202ENST00000554365 NOGQ13253 232 aa17.99■□□□□ 0.47
SPTLC2-202ENST00000554365 TRMT2AQ8IZ69 625 aaKnown RBP17.99■□□□□ 0.47
SPTLC2-202ENST00000554365 TBC1D16Q8TBP0 767 aa17.99■□□□□ 0.47
SPTLC2-202ENST00000554365 DCPSQ96C86 337 aaKnown RBP17.99■□□□□ 0.47
SPTLC2-202ENST00000554365 MBIPQ9NS73 344 aa17.99■□□□□ 0.47
SPTLC2-202ENST00000554365 ADM5C9JUS6 153 aa17.98■□□□□ 0.47
SPTLC2-202ENST00000554365 G3V3G9 751 aa17.98■□□□□ 0.47
SPTLC2-202ENST00000554365 ZNF853P0CG23 659 aa17.98■□□□□ 0.47
SPTLC2-202ENST00000554365 TRIM28Q13263 835 aaKnown RBP17.98■□□□□ 0.47
SPTLC2-202ENST00000554365 DCAF8Q5TAQ9 597 aa17.98■□□□□ 0.47
SPTLC2-202ENST00000554365 ZIC5Q96T25 663 aa17.98■□□□□ 0.47
SPTLC2-202ENST00000554365 ZC3H12CQ9C0D7 883 aaKnown RBP17.98■□□□□ 0.47
SPTLC2-202ENST00000554365 RTL9Q8NET4 1388 aa17.98■□□□□ 0.47
SPTLC2-202ENST00000554365 C2orf69Q8N8R5 385 aa17.97■□□□□ 0.47
SPTLC2-202ENST00000554365 MCOLN1Q9GZU1 580 aa17.97■□□□□ 0.47
SPTLC2-202ENST00000554365 PHAXQ9H814 394 aaKnown RBP17.97■□□□□ 0.47
SPTLC2-202ENST00000554365 GBA2Q9HCG7 927 aaPredicted RBP17.97■□□□□ 0.47
SPTLC2-202ENST00000554365 SEC31BQ9NQW1 1179 aa17.97■□□□□ 0.47
SPTLC2-202ENST00000554365 ANKIB1Q9P2G1 1089 aa17.97■□□□□ 0.47
SPTLC2-202ENST00000554365 ELL2O00472 640 aaPredicted RBP17.96■□□□□ 0.47
SPTLC2-202ENST00000554365 UFL1O94874 794 aa17.96■□□□□ 0.47
SPTLC2-202ENST00000554365 KIF4BQ2VIQ3 1234 aa17.96■□□□□ 0.47
SPTLC2-202ENST00000554365 RGMBQ6NW40 437 aa17.96■□□□□ 0.47
SPTLC2-202ENST00000554365 ZBTB38Q8NAP3 1195 aaPredicted RBP17.96■□□□□ 0.47
SPTLC2-202ENST00000554365 MYD88Q99836 296 aa17.96■□□□□ 0.47
SPTLC2-202ENST00000554365 E9PSI1 815 aa17.95■□□□□ 0.46
SPTLC2-202ENST00000554365 HSP90B1P14625 803 aaKnown RBP17.95■□□□□ 0.46
SPTLC2-202ENST00000554365 MLLT1Q03111 559 aaPredicted RBP17.95■□□□□ 0.46
SPTLC2-202ENST00000554365 DGKZQ13574 1117 aa17.95■□□□□ 0.46
SPTLC2-202ENST00000554365 IFT57Q9NWB7 429 aa17.95■□□□□ 0.46
SPTLC2-202ENST00000554365 VIL1P09327 827 aaKnown RBP17.94■□□□□ 0.46
SPTLC2-202ENST00000554365 CALD1Q05682 793 aaKnown RBP17.94■□□□□ 0.46
SPTLC2-202ENST00000554365 SULF1Q8IWU6 871 aa17.94■□□□□ 0.46
SPTLC2-202ENST00000554365 JARID2Q92833 1246 aaPredicted RBP17.94■□□□□ 0.46
SPTLC2-202ENST00000554365 CCDC85AQ96PX6 553 aaPredicted RBP17.94■□□□□ 0.46
SPTLC2-202ENST00000554365 GGA3Q9NZ52 723 aa17.94■□□□□ 0.46
SPTLC2-202ENST00000554365 PODXL2Q9NZ53 605 aa17.94■□□□□ 0.46
SPTLC2-202ENST00000554365 GGA1Q9UJY5 639 aa17.94■□□□□ 0.46
SPTLC2-202ENST00000554365 FAM155AB1AL88 458 aaPredicted RBP17.93■□□□□ 0.46
SPTLC2-202ENST00000554365 ZNF157P51786 506 aaPredicted RBP17.93■□□□□ 0.46
SPTLC2-202ENST00000554365 CCDC152Q4G0S7 254 aa17.93■□□□□ 0.46
SPTLC2-202ENST00000554365 ASTN2O75129 1339 aaPredicted RBP17.93■□□□□ 0.46
SPTLC2-202ENST00000554365 CASP8AP2Q9UKL3 1982 aa17.92■□□□□ 0.46
SPTLC2-202ENST00000554365 PDE8AO60658 829 aa17.92■□□□□ 0.46
SPTLC2-202ENST00000554365 PCCAP05165 728 aaPredicted RBP17.92■□□□□ 0.46
SPTLC2-202ENST00000554365 GNAI1P63096 354 aa17.92■□□□□ 0.46
SPTLC2-202ENST00000554365 KIF23Q02241 960 aaPredicted RBP17.92■□□□□ 0.46
SPTLC2-202ENST00000554365 CCDC191Q8NCU4 936 aa17.92■□□□□ 0.46
SPTLC2-202ENST00000554365 CCDC102AQ96A19 550 aa17.92■□□□□ 0.46
SPTLC2-202ENST00000554365 CWC25Q9NXE8 425 aaPredicted RBP17.92■□□□□ 0.46
SPTLC2-202ENST00000554365 FANCIQ9NVI1 1328 aa17.92■□□□□ 0.46
SPTLC2-202ENST00000554365 RGS19P49795 217 aa17.91■□□□□ 0.46
SPTLC2-202ENST00000554365 TSR2Q969E8 191 aaKnown RBP17.91■□□□□ 0.46
SPTLC2-202ENST00000554365 SCN9AQ15858 1988 aa17.9■□□□□ 0.46
SPTLC2-202ENST00000554365 RSBN1LQ6PCB5 846 aaPredicted RBP17.9■□□□□ 0.46
SPTLC2-202ENST00000554365 ANKRD18AQ8IVF6 992 aa17.9■□□□□ 0.46
SPTLC2-202ENST00000554365 CDCA5Q96FF9 252 aa17.9■□□□□ 0.46
SPTLC2-202ENST00000554365 POLR2AP24928 1970 aaKnown RBP17.9■□□□□ 0.46
SPTLC2-202ENST00000554365 DDX58O95786 925 aaKnown RBP17.89■□□□□ 0.45
SPTLC2-202ENST00000554365 SCARF1Q14162 830 aa17.89■□□□□ 0.45
SPTLC2-202ENST00000554365 ANGEL2Q5VTE6 544 aaKnown RBP17.89■□□□□ 0.45
SPTLC2-202ENST00000554365 C8orf58Q8NAV2 365 aa17.89■□□□□ 0.45
SPTLC2-202ENST00000554365 AGBL3Q8NEM8 1001 aa17.89■□□□□ 0.45
SPTLC2-202ENST00000554365 METTL22Q9BUU2 404 aaPredicted RBP17.89■□□□□ 0.45
SPTLC2-202ENST00000554365 MYH16Q9H6N6 1097 aa17.89■□□□□ 0.45
SPTLC2-202ENST00000554365 XDHP47989 1333 aa17.89■□□□□ 0.45
SPTLC2-202ENST00000554365 TRPA1O75762 1119 aa17.88■□□□□ 0.45
SPTLC2-202ENST00000554365 CCDC30Q5VVM6 783 aa17.88■□□□□ 0.45
SPTLC2-202ENST00000554365 SAGE1Q9NXZ1 904 aa17.88■□□□□ 0.45
SPTLC2-202ENST00000554365 SLC10A3P09131 477 aa17.87■□□□□ 0.45
SPTLC2-202ENST00000554365 ZNF280AP59817 542 aaPredicted RBP17.87■□□□□ 0.45
SPTLC2-202ENST00000554365 MYOZ2Q9NPC6 264 aa17.87■□□□□ 0.45
SPTLC2-202ENST00000554365 RNF186Q9NXI6 227 aa17.87■□□□□ 0.45
SPTLC2-202ENST00000554365 MAP3K2Q9Y2U5 619 aa17.87■□□□□ 0.45
SPTLC2-202ENST00000554365 USP17L3A6NCW0 530 aa17.86■□□□□ 0.45
SPTLC2-202ENST00000554365 USP17L4A6NCW7 530 aa17.86■□□□□ 0.45
SPTLC2-202ENST00000554365 USP17L8P0C7I0 530 aa17.86■□□□□ 0.45
SPTLC2-202ENST00000554365 ATP2B4P23634 1241 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms