RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 DNAJC25Q9H1X3 360 aa10.25□□□□□ -0.77
GTF2A1-203ENST00000553612 TPCN1Q9ULQ1 816 aa10.25□□□□□ -0.77
GTF2A1-203ENST00000553612 ME1P48163 572 aa10.24□□□□□ -0.77
GTF2A1-203ENST00000553612 PPP1R7Q15435 360 aa10.24□□□□□ -0.77
GTF2A1-203ENST00000553612 NACA2Q9H009 215 aa10.24□□□□□ -0.77
GTF2A1-203ENST00000553612 STK38LQ9Y2H1 464 aa10.24□□□□□ -0.77
GTF2A1-203ENST00000553612 WDR33Q9C0J8 1336 aaKnown RBP10.24□□□□□ -0.77
GTF2A1-203ENST00000553612 CHD1LQ86WJ1 897 aa10.24□□□□□ -0.77
GTF2A1-203ENST00000553612 RUSC2Q8N2Y8 1516 aa10.24□□□□□ -0.77
GTF2A1-203ENST00000553612 ATP6V1G1O75348 118 aa10.24□□□□□ -0.77
GTF2A1-203ENST00000553612 MYO1EQ12965 1108 aa10.24□□□□□ -0.77
GTF2A1-203ENST00000553612 NLRP2Q9NX02 1062 aa10.24□□□□□ -0.77
GTF2A1-203ENST00000553612 PKP1Q13835 747 aa10.24□□□□□ -0.77
GTF2A1-203ENST00000553612 LRRC43Q8N309 656 aa10.24□□□□□ -0.77
GTF2A1-203ENST00000553612 PHACTR1Q9C0D0 580 aa10.24□□□□□ -0.77
GTF2A1-203ENST00000553612 RB1CC1Q8TDY2 1594 aa10.24□□□□□ -0.77
GTF2A1-203ENST00000553612 ZFYP08048 801 aaPredicted RBP10.24□□□□□ -0.77
GTF2A1-203ENST00000553612 PDHA1P08559 390 aa10.24□□□□□ -0.77
GTF2A1-203ENST00000553612 CORO7P57737 925 aa10.24□□□□□ -0.77
GTF2A1-203ENST00000553612 PPFIBP1Q86W92 1011 aa10.24□□□□□ -0.77
GTF2A1-203ENST00000553612 GADD45BO75293 160 aaPredicted RBP10.23□□□□□ -0.77
GTF2A1-203ENST00000553612 STK10O94804 968 aaKnown RBP10.23□□□□□ -0.77
GTF2A1-203ENST00000553612 TUFMP49411 452 aaKnown RBP10.23□□□□□ -0.77
GTF2A1-203ENST00000553612 ZNF165P49910 485 aa10.23□□□□□ -0.77
GTF2A1-203ENST00000553612 IFT88Q13099 833 aa10.23□□□□□ -0.77
GTF2A1-203ENST00000553612 TSHZ1Q6ZSZ6 1077 aa10.23□□□□□ -0.77
GTF2A1-203ENST00000553612 CCDC26Q8TAB7 109 aa10.23□□□□□ -0.77
GTF2A1-203ENST00000553612 NAT1P18440 290 aa10.23□□□□□ -0.77
GTF2A1-203ENST00000553612 PRPHP41219 470 aa10.23□□□□□ -0.77
GTF2A1-203ENST00000553612 RPS6KA3P51812 740 aa10.23□□□□□ -0.77
GTF2A1-203ENST00000553612 DUSP27Q5VZP5 1158 aa10.23□□□□□ -0.77
GTF2A1-203ENST00000553612 OLFM4Q6UX06 510 aa10.23□□□□□ -0.77
GTF2A1-203ENST00000553612 GNAT2P19087 354 aa10.23□□□□□ -0.77
GTF2A1-203ENST00000553612 KCNB1Q14721 858 aa10.23□□□□□ -0.77
GTF2A1-203ENST00000553612 Q4G0T1 1027 aa10.23□□□□□ -0.77
GTF2A1-203ENST00000553612 HSP90AA5PQ58FG0 334 aa10.23□□□□□ -0.77
GTF2A1-203ENST00000553612 TSHZ3Q63HK5 1081 aa10.23□□□□□ -0.77
GTF2A1-203ENST00000553612 LARP1BQ659C4 914 aaKnown RBP10.23□□□□□ -0.77
GTF2A1-203ENST00000553612 ZSCAN25Q6NSZ9 544 aa10.23□□□□□ -0.77
GTF2A1-203ENST00000553612 SIL1Q9H173 461 aa10.23□□□□□ -0.77
GTF2A1-203ENST00000553612 ZNF446Q9NWS9 450 aa10.23□□□□□ -0.77
GTF2A1-203ENST00000553612 PECAM1P16284 738 aaPredicted RBP10.23□□□□□ -0.77
GTF2A1-203ENST00000553612 RFC1P35251 1148 aaPredicted RBP10.23□□□□□ -0.77
GTF2A1-203ENST00000553612 SPAG5Q96R06 1193 aa10.23□□□□□ -0.77
GTF2A1-203ENST00000553612 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.23□□□□□ -0.778e-8■□□□□ 9.6
GTF2A1-203ENST00000553612 RNF8O76064 485 aa10.23□□□□□ -0.77
GTF2A1-203ENST00000553612 TXLNAP40222 546 aa10.23□□□□□ -0.77
GTF2A1-203ENST00000553612 MAATS1Q7Z4T9 603 aa10.23□□□□□ -0.77
GTF2A1-203ENST00000553612 PARP1P09874 1014 aaKnown RBP10.22□□□□□ -0.77
GTF2A1-203ENST00000553612 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.22□□□□□ -0.771e-12■■■■□ 22.4
GTF2A1-203ENST00000553612 FBF1Q8TES7 1133 aa10.22□□□□□ -0.77
GTF2A1-203ENST00000553612 EME2A4GXA9 379 aaPredicted RBP10.22□□□□□ -0.77
GTF2A1-203ENST00000553612 POTEB2H3BUK9 544 aa10.22□□□□□ -0.77
GTF2A1-203ENST00000553612 GNAT1P11488 350 aa10.22□□□□□ -0.77
GTF2A1-203ENST00000553612 ATP1A2P50993 1020 aa10.22□□□□□ -0.77
GTF2A1-203ENST00000553612 FILIP1LQ4L180 1135 aa10.22□□□□□ -0.77
GTF2A1-203ENST00000553612 GRAMD4Q6IC98 578 aa10.22□□□□□ -0.77
GTF2A1-203ENST00000553612 DRC3Q9H069 523 aa10.22□□□□□ -0.77
GTF2A1-203ENST00000553612 PPFIA4O75335 1185 aa10.22□□□□□ -0.77
GTF2A1-203ENST00000553612 BRD1O95696 1058 aa10.22□□□□□ -0.77
GTF2A1-203ENST00000553612 CXorf38Q8TB03 319 aa10.22□□□□□ -0.77
GTF2A1-203ENST00000553612 RMDN2Q96LZ7 410 aa10.22□□□□□ -0.77
GTF2A1-203ENST00000553612 VCXQ9H320 206 aa10.22□□□□□ -0.77
GTF2A1-203ENST00000553612 NEXNQ0ZGT2 675 aa10.22□□□□□ -0.77
GTF2A1-203ENST00000553612 SUGP1Q8IWZ8 645 aaKnown RBP10.22□□□□□ -0.77
GTF2A1-203ENST00000553612 CAPZA3Q96KX2 299 aa10.22□□□□□ -0.77
GTF2A1-203ENST00000553612 CEP164Q9UPV0 1460 aa10.21□□□□□ -0.77
GTF2A1-203ENST00000553612 TMEM110-MUSTN1A8MSY1 372 aa10.21□□□□□ -0.77
GTF2A1-203ENST00000553612 ATP8B1O43520 1251 aa10.21□□□□□ -0.77
GTF2A1-203ENST00000553612 MX1P20591 662 aa10.21□□□□□ -0.77
GTF2A1-203ENST00000553612 SH2D4BQ5SQS7 431 aa10.21□□□□□ -0.77
GTF2A1-203ENST00000553612 CCDC80Q76M96 950 aa10.21□□□□□ -0.77
GTF2A1-203ENST00000553612 USHBP1Q8N6Y0 703 aa10.21□□□□□ -0.77
GTF2A1-203ENST00000553612 GFM2Q969S9 779 aaKnown RBP10.21□□□□□ -0.77
GTF2A1-203ENST00000553612 FAM170AA1A519 330 aa10.21□□□□□ -0.77
GTF2A1-203ENST00000553612 VCAM1P19320 739 aa10.21□□□□□ -0.77
GTF2A1-203ENST00000553612 HPDP32754 393 aaPredicted RBP10.21□□□□□ -0.77
GTF2A1-203ENST00000553612 KIF11P52732 1056 aa10.21□□□□□ -0.77
GTF2A1-203ENST00000553612 COG7P83436 770 aa10.21□□□□□ -0.77
GTF2A1-203ENST00000553612 CCDC38Q502W7 563 aa10.21□□□□□ -0.77
GTF2A1-203ENST00000553612 TBC1D9Q6ZT07 1266 aa10.21□□□□□ -0.77
GTF2A1-203ENST00000553612 TSPYL2Q9H2G4 693 aaPredicted RBP10.21□□□□□ -0.77
GTF2A1-203ENST00000553612 KLC4Q9NSK0 619 aa10.21□□□□□ -0.77
GTF2A1-203ENST00000553612 SAPCD2Q86UD0 394 aa10.21□□□□□ -0.78
GTF2A1-203ENST00000553612 PLEKHH1Q9ULM0 1364 aa10.21□□□□□ -0.78
GTF2A1-203ENST00000553612 DAAM2Q86T65 1068 aa10.21□□□□□ -0.78
GTF2A1-203ENST00000553612 SCRIBQ14160 1630 aa10.2□□□□□ -0.78
GTF2A1-203ENST00000553612 ZFXP17010 805 aaPredicted RBP10.2□□□□□ -0.78
GTF2A1-203ENST00000553612 SYNE3Q6ZMZ3 975 aa10.2□□□□□ -0.78
GTF2A1-203ENST00000553612 TRIM58Q8NG06 486 aa10.2□□□□□ -0.78
GTF2A1-203ENST00000553612 WDHD1O75717 1129 aaPredicted RBP10.2□□□□□ -0.78
GTF2A1-203ENST00000553612 EXOSC9Q06265 439 aaKnown RBP10.2□□□□□ -0.78
GTF2A1-203ENST00000553612 SPATA21Q7Z572 469 aa10.2□□□□□ -0.78
GTF2A1-203ENST00000553612 UBE2Q1Q7Z7E8 422 aa10.2□□□□□ -0.78
GTF2A1-203ENST00000553612 TMEM57Q8N5G2 664 aa10.2□□□□□ -0.78
GTF2A1-203ENST00000553612 MAF1Q9H063 256 aa10.2□□□□□ -0.78
GTF2A1-203ENST00000553612 PYGBP11216 843 aa10.2□□□□□ -0.78
GTF2A1-203ENST00000553612 KRT85P78386 507 aa10.2□□□□□ -0.78
GTF2A1-203ENST00000553612 ABCF3Q9NUQ8 709 aa10.2□□□□□ -0.78
GTF2A1-203ENST00000553612 ANKRD62A6NC57 917 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms