RNA–Protein interactions for RNA: ENST00000553272.6

PCNX1-203, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 553 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-203ENST00000553272 RIMBP2O15034 1052 aa10.49□□□□□ -0.73
PCNX1-203ENST00000553272 ECE2O60344 883 aa10.49□□□□□ -0.73
PCNX1-203ENST00000553272 NEFMP07197 916 aa10.49□□□□□ -0.73
PCNX1-203ENST00000553272 VIL1P09327 827 aaKnown RBP10.49□□□□□ -0.73
PCNX1-203ENST00000553272 SF3B3Q15393 1217 aaKnown RBP10.49□□□□□ -0.73
PCNX1-203ENST00000553272 PKN2Q16513 984 aaKnown RBP10.49□□□□□ -0.73
PCNX1-203ENST00000553272 KIF4BQ2VIQ3 1234 aa10.49□□□□□ -0.73
PCNX1-203ENST00000553272 RASAL3Q86YV0 1011 aa10.49□□□□□ -0.73
PCNX1-203ENST00000553272 CELF1Q92879 486 aaKnown RBP10.49□□□□□ -0.73
PCNX1-203ENST00000553272 COL4A1P02462 1669 aa10.49□□□□□ -0.73
PCNX1-203ENST00000553272 ASTN2O75129 1339 aaPredicted RBP10.49□□□□□ -0.73
PCNX1-203ENST00000553272 TBC1D8O95759 1140 aa10.48□□□□□ -0.73
PCNX1-203ENST00000553272 GPSM2P81274 684 aa10.48□□□□□ -0.73
PCNX1-203ENST00000553272 AIMP1Q12904 312 aaKnown RBP10.48□□□□□ -0.73
PCNX1-203ENST00000553272 DOK7Q18PE1 504 aa10.48□□□□□ -0.73
PCNX1-203ENST00000553272 SULF1Q8IWU6 871 aa10.48□□□□□ -0.73
PCNX1-203ENST00000553272 XAGE3Q8WTP9 111 aa10.48□□□□□ -0.73
PCNX1-203ENST00000553272 ZNF296Q8WUU4 475 aaPredicted RBP10.48□□□□□ -0.73
PCNX1-203ENST00000553272 CDCA5Q96FF9 252 aa10.48□□□□□ -0.73
PCNX1-203ENST00000553272 GGA3Q9NZ52 723 aa10.48□□□□□ -0.73
PCNX1-203ENST00000553272 TSPYL4Q9UJ04 414 aa10.48□□□□□ -0.73
PCNX1-203ENST00000553272 C6orf229H3BNL8 230 aa10.47□□□□□ -0.73
PCNX1-203ENST00000553272 ZNF280AP59817 542 aaPredicted RBP10.47□□□□□ -0.73
PCNX1-203ENST00000553272 FKBP1BP68106 108 aa10.47□□□□□ -0.73
PCNX1-203ENST00000553272 TBC1D16Q8TBP0 767 aa10.47□□□□□ -0.73
PCNX1-203ENST00000553272 BABAM1Q9NWV8 329 aa10.47□□□□□ -0.73
PCNX1-203ENST00000553272 POTEFA5A3E0 1075 aa10.46□□□□□ -0.73
PCNX1-203ENST00000553272 DLL1O00548 723 aa10.46□□□□□ -0.73
PCNX1-203ENST00000553272 SCARF1Q14162 830 aa10.46□□□□□ -0.73
PCNX1-203ENST00000553272 ANGEL2Q5VTE6 544 aaKnown RBP10.46□□□□□ -0.73
PCNX1-203ENST00000553272 NECTIN2Q92692 538 aa10.46□□□□□ -0.73
PCNX1-203ENST00000553272 ZNF428Q96B54 188 aa10.46□□□□□ -0.73
PCNX1-203ENST00000553272 FAM89AQ96GI7 184 aa10.46□□□□□ -0.73
PCNX1-203ENST00000553272 EYA3Q99504 573 aa10.46□□□□□ -0.73
PCNX1-203ENST00000553272 ZNF609O15014 1411 aa10.46□□□□□ -0.74
PCNX1-203ENST00000553272 CUL9Q8IWT3 2517 aa10.46□□□□□ -0.74
PCNX1-203ENST00000553272 TM4SF4P48230 202 aa10.45□□□□□ -0.74
PCNX1-203ENST00000553272 RPS8P62241 208 aaKnown RBP10.45□□□□□ -0.74
PCNX1-203ENST00000553272 MKRN3Q13064 507 aaKnown RBP10.45□□□□□ -0.74
PCNX1-203ENST00000553272 NOM1Q5C9Z4 860 aaKnown RBP10.45□□□□□ -0.74
PCNX1-203ENST00000553272 AGBL3Q8NEM8 1001 aa10.45□□□□□ -0.74
PCNX1-203ENST00000553272 GMLQ99445 158 aa10.45□□□□□ -0.74
PCNX1-203ENST00000553272 ISCA1Q9BUE6 129 aa10.45□□□□□ -0.74
PCNX1-203ENST00000553272 ZC3H12CQ9C0D7 883 aaKnown RBP10.45□□□□□ -0.74
PCNX1-203ENST00000553272 PODXL2Q9NZ53 605 aa10.45□□□□□ -0.74
PCNX1-203ENST00000553272 COL6A3P12111 3177 aa10.45□□□□□ -0.74
PCNX1-203ENST00000553272 ZSWIM8A7E2V4 1837 aa10.44□□□□□ -0.74
PCNX1-203ENST00000553272 PITPNM2Q9BZ72 1349 aa10.44□□□□□ -0.74
PCNX1-203ENST00000553272 RSBN1LQ6PCB5 846 aaPredicted RBP10.44□□□□□ -0.74
PCNX1-203ENST00000553272 FBXO46Q6PJ61 603 aaPredicted RBP10.44□□□□□ -0.74
PCNX1-203ENST00000553272 MOB2Q70IA6 237 aa10.44□□□□□ -0.74
PCNX1-203ENST00000553272 PLBD2Q8NHP8 589 aa10.44□□□□□ -0.74
PCNX1-203ENST00000553272 PNNQ9H307 717 aaKnown RBP10.44□□□□□ -0.74
PCNX1-203ENST00000553272 SCAF8Q9UPN6 1271 aaKnown RBP10.44□□□□□ -0.74
PCNX1-203ENST00000553272 COLQQ9Y215 455 aaPredicted RBP10.44□□□□□ -0.74
PCNX1-203ENST00000553272 SPEF2Q9C093 1822 aa10.44□□□□□ -0.74
PCNX1-203ENST00000553272 UBE2Q2LH0YL09 131 aa10.43□□□□□ -0.74
PCNX1-203ENST00000553272 GPR25O00155 361 aa10.43□□□□□ -0.74
PCNX1-203ENST00000553272 TRIM28Q13263 835 aaKnown RBP10.43□□□□□ -0.74
PCNX1-203ENST00000553272 KRT24Q2M2I5 525 aa10.43□□□□□ -0.74
PCNX1-203ENST00000553272 ANKRD13DQ6ZTN6 518 aa10.43□□□□□ -0.74
PCNX1-203ENST00000553272 CFHR5Q9BXR6 569 aa10.43□□□□□ -0.74
PCNX1-203ENST00000553272 LAMB1P07942 1786 aa10.43□□□□□ -0.74
PCNX1-203ENST00000553272 ZNF646O15015 1829 aaPredicted RBP10.42□□□□□ -0.74
PCNX1-203ENST00000553272 MAPK8IP3Q9UPT6 1336 aa10.42□□□□□ -0.74
PCNX1-203ENST00000553272 ATP5J2-PTCD1G3V325 749 aa10.42□□□□□ -0.74
PCNX1-203ENST00000553272 USP17L8P0C7I0 530 aa10.42□□□□□ -0.74
PCNX1-203ENST00000553272 RIPK4P57078 832 aa10.42□□□□□ -0.74
PCNX1-203ENST00000553272 PRAMEF18Q5VWM3 479 aa10.42□□□□□ -0.74
PCNX1-203ENST00000553272 R3HDMLQ9H3Y0 253 aa10.42□□□□□ -0.74
PCNX1-203ENST00000553272 MYOZ2Q9NPC6 264 aa10.42□□□□□ -0.74
PCNX1-203ENST00000553272 CHPF2Q9P2E5 772 aa10.42□□□□□ -0.74
PCNX1-203ENST00000553272 CHL1O00533 1208 aa10.41□□□□□ -0.74
PCNX1-203ENST00000553272 IRS4O14654 1257 aaPredicted RBP10.41□□□□□ -0.74
PCNX1-203ENST00000553272 UFL1O94874 794 aa10.41□□□□□ -0.74
PCNX1-203ENST00000553272 RTL5Q5HYW3 569 aaPredicted RBP10.41□□□□□ -0.74
PCNX1-203ENST00000553272 SEC31BQ9NQW1 1179 aa10.41□□□□□ -0.74
PCNX1-203ENST00000553272 ANKIB1Q9P2G1 1089 aa10.41□□□□□ -0.74
PCNX1-203ENST00000553272 GGA1Q9UJY5 639 aa10.41□□□□□ -0.74
PCNX1-203ENST00000553272 USP17L3A6NCW0 530 aa10.4□□□□□ -0.74
PCNX1-203ENST00000553272 USP17L4A6NCW7 530 aa10.4□□□□□ -0.74
PCNX1-203ENST00000553272 G3V3G9 751 aa10.4□□□□□ -0.74
PCNX1-203ENST00000553272 FKTNO75072 461 aa10.4□□□□□ -0.74
PCNX1-203ENST00000553272 TMPOP42166 694 aaKnown RBP10.4□□□□□ -0.74
PCNX1-203ENST00000553272 MAPK8IP2Q13387 824 aaPredicted RBP10.4□□□□□ -0.74
PCNX1-203ENST00000553272 NBPF9Q3BBW0 867 aa10.4□□□□□ -0.74
PCNX1-203ENST00000553272 DCAF8Q5TAQ9 597 aa10.4□□□□□ -0.74
PCNX1-203ENST00000553272 USP17L1Q7RTZ2 530 aa10.4□□□□□ -0.74
PCNX1-203ENST00000553272 EN2P19622 333 aaPredicted RBP10.39□□□□□ -0.75
PCNX1-203ENST00000553272 PODNQ7Z5L7 613 aa10.39□□□□□ -0.75
PCNX1-203ENST00000553272 ZBTB38Q8NAP3 1195 aaPredicted RBP10.39□□□□□ -0.75
PCNX1-203ENST00000553272 SLC17A8Q8NDX2 589 aa10.39□□□□□ -0.75
PCNX1-203ENST00000553272 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.39□□□□□ -0.75
PCNX1-203ENST00000553272 DBF4Q9UBU7 674 aaPredicted RBP10.39□□□□□ -0.75
PCNX1-203ENST00000553272 TRIM17Q9Y577 477 aa10.39□□□□□ -0.75
PCNX1-203ENST00000553272 RANBP2P49792 3224 aaKnown RBP10.39□□□□□ -0.75
PCNX1-203ENST00000553272 OTOFQ9HC10 1997 aa10.39□□□□□ -0.75
PCNX1-203ENST00000553272 WTIPA6NIX2 430 aaPredicted RBP10.38□□□□□ -0.75
PCNX1-203ENST00000553272 WNT10BO00744 389 aa10.38□□□□□ -0.75
PCNX1-203ENST00000553272 HOXB7P09629 217 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms