RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 KCNMB2Q9Y691 235 aa8.02□□□□□ -1.13
CPSF6-206ENST00000550987 KIAA0556O60303 1618 aa8.02□□□□□ -1.13
CPSF6-206ENST00000550987 CTSHP09668 335 aa8.01□□□□□ -1.13
CPSF6-206ENST00000550987 TRIP4Q15650 581 aaPredicted RBP8.01□□□□□ -1.13
CPSF6-206ENST00000550987 OSBPL7Q9BZF2 842 aa8.01□□□□□ -1.13
CPSF6-206ENST00000550987 RUBCNLQ9H714 662 aa8.01□□□□□ -1.13
CPSF6-206ENST00000550987 FAM8A1Q9UBU6 413 aa8.01□□□□□ -1.13
CPSF6-206ENST00000550987 INPP5FQ9Y2H2 1132 aa8.01□□□□□ -1.13
CPSF6-206ENST00000550987 DNMBPQ6XZF7 1577 aa8.01□□□□□ -1.13
CPSF6-206ENST00000550987 ZNF335Q9H4Z2 1342 aaPredicted RBP8.01□□□□□ -1.13
CPSF6-206ENST00000550987 ATP2B1P20020 1258 aa8□□□□□ -1.13
CPSF6-206ENST00000550987 CES1P23141 567 aa8□□□□□ -1.13
CPSF6-206ENST00000550987 TAF1CQ15572 869 aaPredicted RBP8□□□□□ -1.13
CPSF6-206ENST00000550987 TRIM67Q6ZTA4 783 aa8□□□□□ -1.13
CPSF6-206ENST00000550987 USP48Q86UV5 1035 aa8□□□□□ -1.13
CPSF6-206ENST00000550987 VPS37DQ86XT2 251 aa8□□□□□ -1.13
CPSF6-206ENST00000550987 NPHS2Q9NP85 383 aa8□□□□□ -1.13
CPSF6-206ENST00000550987 BRD7Q9NPI1 651 aa8□□□□□ -1.13
CPSF6-206ENST00000550987 ABI2Q9NYB9 513 aaPredicted RBP8□□□□□ -1.13
CPSF6-206ENST00000550987 PRKAG2Q9UGJ0 569 aa8□□□□□ -1.13
CPSF6-206ENST00000550987 MROH2BQ7Z745 1585 aa8□□□□□ -1.13
CPSF6-206ENST00000550987 GRIN2BQ13224 1484 aa8□□□□□ -1.13
CPSF6-206ENST00000550987 TOM1O60784 492 aa7.99□□□□□ -1.13
CPSF6-206ENST00000550987 F11P03951 625 aa7.99□□□□□ -1.13
CPSF6-206ENST00000550987 USP17L7P0C7H9 530 aa7.99□□□□□ -1.13
CPSF6-206ENST00000550987 EFHC2Q5JST6 749 aa7.99□□□□□ -1.13
CPSF6-206ENST00000550987 NXPE4Q6UWF7 544 aa7.99□□□□□ -1.13
CPSF6-206ENST00000550987 NLRP13Q86W25 1043 aa7.99□□□□□ -1.13
CPSF6-206ENST00000550987 C1orf127Q8N9H9 656 aa7.99□□□□□ -1.13
CPSF6-206ENST00000550987 SLC43A3Q8NBI5 491 aa7.99□□□□□ -1.13
CPSF6-206ENST00000550987 BCO2Q9BYV7 579 aa7.99□□□□□ -1.13
CPSF6-206ENST00000550987 SRCIN1Q9C0H9 1055 aa7.99□□□□□ -1.13
CPSF6-206ENST00000550987 ALKQ9UM73 1620 aa7.99□□□□□ -1.13
CPSF6-206ENST00000550987 ASXL2Q76L83 1435 aa7.98□□□□□ -1.13
CPSF6-206ENST00000550987 PRG4Q92954 1404 aaPredicted RBP7.98□□□□□ -1.13
CPSF6-206ENST00000550987 EREGO14944 169 aa7.98□□□□□ -1.13
CPSF6-206ENST00000550987 DNAJA1P31689 397 aaKnown RBP7.98□□□□□ -1.13
CPSF6-206ENST00000550987 GTF2F1P35269 517 aaKnown RBP eCLIP7.98□□□□□ -1.13
CPSF6-206ENST00000550987 TNNI2P48788 182 aa7.98□□□□□ -1.13
CPSF6-206ENST00000550987 TYRO3Q06418 890 aa7.98□□□□□ -1.13
CPSF6-206ENST00000550987 ZNF394Q53GI3 561 aa7.98□□□□□ -1.13
CPSF6-206ENST00000550987 NLRP8Q86W28 1048 aa7.98□□□□□ -1.13
CPSF6-206ENST00000550987 CNTN3Q9P232 1028 aa7.98□□□□□ -1.13
CPSF6-206ENST00000550987 PDZRN3Q9UPQ7 1066 aa7.98□□□□□ -1.13
CPSF6-206ENST00000550987 PCDHGB7Q9Y5F8 929 aa7.98□□□□□ -1.13
CPSF6-206ENST00000550987 POLA1P09884 1462 aaPredicted RBP7.98□□□□□ -1.13
CPSF6-206ENST00000550987 PBRM1Q86U86 1689 aa7.98□□□□□ -1.13
CPSF6-206ENST00000550987 USP31Q70CQ4 1352 aa7.97□□□□□ -1.13
CPSF6-206ENST00000550987 ABCC8Q09428 1581 aa7.97□□□□□ -1.13
CPSF6-206ENST00000550987 TTC37Q6PGP7 1564 aa7.97□□□□□ -1.13
CPSF6-206ENST00000550987 FAM187AA6NFU0 413 aa7.97□□□□□ -1.13
CPSF6-206ENST00000550987 MEI1Q5TIA1 1274 aa7.97□□□□□ -1.13
CPSF6-206ENST00000550987 GALNT12Q8IXK2 581 aa7.97□□□□□ -1.13
CPSF6-206ENST00000550987 TINF2Q9BSI4 451 aa7.97□□□□□ -1.13
CPSF6-206ENST00000550987 ZCCHC2Q9C0B9 1178 aaKnown RBP7.97□□□□□ -1.13
CPSF6-206ENST00000550987 EHD4Q9H223 541 aa7.97□□□□□ -1.13
CPSF6-206ENST00000550987 C11orf16Q9NQ32 467 aa7.97□□□□□ -1.13
CPSF6-206ENST00000550987 DDX41Q9UJV9 622 aaKnown RBP7.97□□□□□ -1.13
CPSF6-206ENST00000550987 KCNH4Q9UQ05 1017 aa7.97□□□□□ -1.13
CPSF6-206ENST00000550987 DYRK1BQ9Y463 629 aa7.97□□□□□ -1.13
CPSF6-206ENST00000550987 NUP160Q12769 1436 aa7.96□□□□□ -1.13
CPSF6-206ENST00000550987 RAD54L2Q9Y4B4 1467 aa7.96□□□□□ -1.13
CPSF6-206ENST00000550987 PHF20L1A8MW92 1017 aa7.96□□□□□ -1.14
CPSF6-206ENST00000550987 SASH3O75995 380 aa7.96□□□□□ -1.14
CPSF6-206ENST00000550987 EGFRP00533 1210 aa7.96□□□□□ -1.14
CPSF6-206ENST00000550987 PRELPP51888 382 aa7.96□□□□□ -1.14
CPSF6-206ENST00000550987 ARID5AQ03989 594 aa7.96□□□□□ -1.14
CPSF6-206ENST00000550987 RIPOR1Q6ZS17 1223 aa7.96□□□□□ -1.14
CPSF6-206ENST00000550987 KRT25Q7Z3Z0 450 aa7.96□□□□□ -1.14
CPSF6-206ENST00000550987 PNMA5Q96PV4 448 aa7.96□□□□□ -1.14
CPSF6-206ENST00000550987 CRISPLD1Q9H336 500 aa7.96□□□□□ -1.14
CPSF6-206ENST00000550987 SOS2Q07890 1332 aaPredicted RBP7.96□□□□□ -1.14
CPSF6-206ENST00000550987 EDN3P14138 238 aa7.95□□□□□ -1.14
CPSF6-206ENST00000550987 GSTT1P30711 240 aa7.95□□□□□ -1.14
CPSF6-206ENST00000550987 FIGNL1Q6PIW4 674 aa7.95□□□□□ -1.14
CPSF6-206ENST00000550987 SUV39H2Q9H5I1 410 aa7.95□□□□□ -1.14
CPSF6-206ENST00000550987 TTF2Q9UNY4 1162 aaKnown RBP7.95□□□□□ -1.14
CPSF6-206ENST00000550987 TRAK1Q9UPV9 953 aa7.95□□□□□ -1.14
CPSF6-206ENST00000550987 EPRSP07814 1512 aaKnown RBP7.94□□□□□ -1.14
CPSF6-206ENST00000550987 BMP1P13497 986 aa7.94□□□□□ -1.14
CPSF6-206ENST00000550987 ST13P50502 369 aaKnown RBP7.94□□□□□ -1.14
CPSF6-206ENST00000550987 RACK1P63244 317 aaKnown RBP7.94□□□□□ -1.14
CPSF6-206ENST00000550987 PTPN12Q05209 780 aaKnown RBP7.94□□□□□ -1.14
CPSF6-206ENST00000550987 CCINQ13939 588 aa7.94□□□□□ -1.14
CPSF6-206ENST00000550987 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.94□□□□□ -1.142e-8■■■■■ 31.8
CPSF6-206ENST00000550987 DHX38Q92620 1227 aaKnown RBP7.94□□□□□ -1.14
CPSF6-206ENST00000550987 DNAJC2Q99543 621 aaKnown RBP7.94□□□□□ -1.14
CPSF6-206ENST00000550987 CHRDQ9H2X0 955 aa7.94□□□□□ -1.14
CPSF6-206ENST00000550987 ARID4BQ4LE39 1312 aaPredicted RBP7.94□□□□□ -1.14
CPSF6-206ENST00000550987 FER1L4A9Z1Z3 1794 aa7.93□□□□□ -1.14
CPSF6-206ENST00000550987 ATXN7O15265 892 aaPredicted RBP7.93□□□□□ -1.14
CPSF6-206ENST00000550987 MAN1A2O60476 641 aa7.93□□□□□ -1.14
CPSF6-206ENST00000550987 HMGB1P09429 215 aaKnown RBP7.93□□□□□ -1.14
CPSF6-206ENST00000550987 TARSP26639 723 aaKnown RBP7.93□□□□□ -1.14
CPSF6-206ENST00000550987 GRNP28799 593 aaKnown RBP7.93□□□□□ -1.14
CPSF6-206ENST00000550987 GRM2Q14416 872 aa7.93□□□□□ -1.14
CPSF6-206ENST00000550987 SAMD5Q5TGI4 173 aa7.93□□□□□ -1.14
CPSF6-206ENST00000550987 FAM177A1Q8N128 213 aaPredicted RBP7.93□□□□□ -1.14
CPSF6-206ENST00000550987 ZFP42Q96MM3 310 aa7.93□□□□□ -1.14
CPSF6-206ENST00000550987 GRIN2AQ12879 1464 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms