RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 SYAP1Q96A49 352 aaPredicted RBP22.07■■□□□ 1.12
PRPF40B-208ENST00000548436 CEP126Q9P2H0 1117 aa22.07■■□□□ 1.12
PRPF40B-208ENST00000548436 BCL9O00512 1426 aa22.07■■□□□ 1.12
PRPF40B-208ENST00000548436 MAP3K15Q6ZN16 1313 aa22.07■■□□□ 1.12
PRPF40B-208ENST00000548436 VPS37CA5D8V6 355 aaPredicted RBP22.07■■□□□ 1.12
PRPF40B-208ENST00000548436 HLFQ16534 295 aa22.07■■□□□ 1.12
PRPF40B-208ENST00000548436 ZBTB38Q8NAP3 1195 aaPredicted RBP22.07■■□□□ 1.12
PRPF40B-208ENST00000548436 PLA2G12BQ9BX93 195 aa22.07■■□□□ 1.12
PRPF40B-208ENST00000548436 HELLSQ9NRZ9 838 aa22.07■■□□□ 1.12
PRPF40B-208ENST00000548436 ANKRD36CQ5JPF3 1778 aa22.06■■□□□ 1.12
PRPF40B-208ENST00000548436 DNM1Q05193 864 aaKnown RBP22.06■■□□□ 1.12
PRPF40B-208ENST00000548436 ZMYM1Q5SVZ6 1142 aa22.06■■□□□ 1.12
PRPF40B-208ENST00000548436 LARP1BQ659C4 914 aaKnown RBP22.06■■□□□ 1.12
PRPF40B-208ENST00000548436 SYNE4Q8N205 404 aa22.06■■□□□ 1.12
PRPF40B-208ENST00000548436 CERKQ8TCT0 537 aa22.06■■□□□ 1.12
PRPF40B-208ENST00000548436 ESPNB1AK53 854 aa22.05■■□□□ 1.12
PRPF40B-208ENST00000548436 FIBPO43427 364 aa22.05■■□□□ 1.12
PRPF40B-208ENST00000548436 CSF1RP07333 972 aa22.05■■□□□ 1.12
PRPF40B-208ENST00000548436 STK3Q13188 491 aa22.05■■□□□ 1.12
PRPF40B-208ENST00000548436 GIGYF2Q6Y7W6 1299 aaKnown RBP22.05■■□□□ 1.12
PRPF40B-208ENST00000548436 COL16A1Q07092 1604 aaPredicted RBP22.05■■□□□ 1.12
PRPF40B-208ENST00000548436 PLCH1Q4KWH8 1693 aa22.05■■□□□ 1.12
PRPF40B-208ENST00000548436 LRP6O75581 1613 aa22.05■■□□□ 1.12
PRPF40B-208ENST00000548436 MYH3P11055 1940 aa22.05■■□□□ 1.12
PRPF40B-208ENST00000548436 NUP98P52948 1817 aa22.04■■□□□ 1.12
PRPF40B-208ENST00000548436 CYP19A1P11511 503 aaPredicted RBP22.04■■□□□ 1.12
PRPF40B-208ENST00000548436 ADORA1P30542 326 aa22.04■■□□□ 1.12
PRPF40B-208ENST00000548436 CLCN1P35523 988 aa22.04■■□□□ 1.12
PRPF40B-208ENST00000548436 UBE2HP62256 183 aa22.04■■□□□ 1.12
PRPF40B-208ENST00000548436 STOX1Q6ZVD7 989 aa22.04■■□□□ 1.12
PRPF40B-208ENST00000548436 TICAM2Q86XR7 235 aa22.04■■□□□ 1.12
PRPF40B-208ENST00000548436 WNK3Q9BYP7 1800 aa22.03■■□□□ 1.12
PRPF40B-208ENST00000548436 Q6ZUG5 572 aa22.03■■□□□ 1.12
PRPF40B-208ENST00000548436 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.03■■□□□ 1.12
PRPF40B-208ENST00000548436 FBXO3Q9UK99 471 aa22.03■■□□□ 1.12
PRPF40B-208ENST00000548436 ROBO1Q9Y6N7 1651 aa22.03■■□□□ 1.12
PRPF40B-208ENST00000548436 GPTP24298 496 aa22.03■■□□□ 1.12
PRPF40B-208ENST00000548436 TPRNQ4KMQ1 711 aa22.03■■□□□ 1.12
PRPF40B-208ENST00000548436 CDC37L1Q7L3B6 337 aa22.03■■□□□ 1.12
PRPF40B-208ENST00000548436 DSCC1Q9BVC3 393 aa22.03■■□□□ 1.12
PRPF40B-208ENST00000548436 RNF113AO15541 343 aaKnown RBP22.02■■□□□ 1.12
PRPF40B-208ENST00000548436 NLRP10Q86W26 655 aa22.02■■□□□ 1.12
PRPF40B-208ENST00000548436 XAGE2Q96GT9 111 aa22.02■■□□□ 1.12
PRPF40B-208ENST00000548436 MAST3O60307 1309 aa22.02■■□□□ 1.12
PRPF40B-208ENST00000548436 IFIT5Q13325 482 aaKnown RBP22.02■■□□□ 1.11
PRPF40B-208ENST00000548436 TSPY26PQ9H489 355 aa22.02■■□□□ 1.11
PRPF40B-208ENST00000548436 AKAP2Q9Y2D5 859 aa22.02■■□□□ 1.11
PRPF40B-208ENST00000548436 HSPD1P10809 573 aaKnown RBP22.01■■□□□ 1.11
PRPF40B-208ENST00000548436 TAF7LQ5H9L4 462 aa22.01■■□□□ 1.11
PRPF40B-208ENST00000548436 GTF3C6Q969F1 213 aa22.01■■□□□ 1.11
PRPF40B-208ENST00000548436 PDLIM2Q96JY6 352 aa22.01■■□□□ 1.11
PRPF40B-208ENST00000548436 ZBTB1Q9Y2K1 713 aa22.01■■□□□ 1.11
PRPF40B-208ENST00000548436 CDHR2Q9BYE9 1310 aa22.01■■□□□ 1.11
PRPF40B-208ENST00000548436 A0A0G2JLW4 131 aa22■■□□□ 1.11
PRPF40B-208ENST00000548436 EXOC5O00471 708 aa22■■□□□ 1.11
PRPF40B-208ENST00000548436 PHF14O94880 888 aa22■■□□□ 1.11
PRPF40B-208ENST00000548436 PDCP20941 246 aa22■■□□□ 1.11
PRPF40B-208ENST00000548436 FKBP4Q02790 459 aaKnown RBP eCLIP22■■□□□ 1.11
PRPF40B-208ENST00000548436 CCDC158Q5M9N0 1113 aa22■■□□□ 1.11
PRPF40B-208ENST00000548436 RNF214Q8ND24 703 aa22■■□□□ 1.11
PRPF40B-208ENST00000548436 SYTL4Q96C24 671 aaPredicted RBP22■■□□□ 1.11
PRPF40B-208ENST00000548436 LRRC2Q9BYS8 371 aa22■■□□□ 1.11
PRPF40B-208ENST00000548436 COL22A1Q8NFW1 1626 aaPredicted RBP22■■□□□ 1.11
PRPF40B-208ENST00000548436 M0R2C6 588 aa22■■□□□ 1.11
PRPF40B-208ENST00000548436 PDIA4P13667 645 aaKnown RBP22■■□□□ 1.11
PRPF40B-208ENST00000548436 TTC39AQ5SRH9 613 aa22■■□□□ 1.11
PRPF40B-208ENST00000548436 CCDC183Q5T5S1 534 aa22■■□□□ 1.11
PRPF40B-208ENST00000548436 FERMT3Q86UX7 667 aa22■■□□□ 1.11
PRPF40B-208ENST00000548436 MYH7P12883 1935 aa22■■□□□ 1.11
PRPF40B-208ENST00000548436 SCARF1Q14162 830 aa21.99■■□□□ 1.11
PRPF40B-208ENST00000548436 GORABQ5T7V8 394 aa21.99■■□□□ 1.11
PRPF40B-208ENST00000548436 TTLL11Q8NHH1 800 aa21.99■■□□□ 1.11
PRPF40B-208ENST00000548436 RIC1Q4ADV7 1423 aa21.99■■□□□ 1.11
PRPF40B-208ENST00000548436 DOT1LQ8TEK3 1739 aa21.99■■□□□ 1.11
PRPF40B-208ENST00000548436 TOM1O60784 492 aa21.99■■□□□ 1.11
PRPF40B-208ENST00000548436 CSPP1Q1MSJ5 1256 aa21.99■■□□□ 1.11
PRPF40B-208ENST00000548436 OSBP2Q969R2 916 aa21.99■■□□□ 1.11
PRPF40B-208ENST00000548436 GREM2Q9H772 168 aa21.99■■□□□ 1.11
PRPF40B-208ENST00000548436 JAK2O60674 1132 aa21.98■■□□□ 1.11
PRPF40B-208ENST00000548436 BRF1Q92994 677 aa21.98■■□□□ 1.11
PRPF40B-208ENST00000548436 RIPOR2Q9Y4F9 1068 aa21.98■■□□□ 1.11
PRPF40B-208ENST00000548436 AKAP11Q9UKA4 1901 aa21.98■■□□□ 1.11
PRPF40B-208ENST00000548436 HSP90B1P14625 803 aaKnown RBP21.97■■□□□ 1.11
PRPF40B-208ENST00000548436 ITGA6P23229 1130 aa21.97■■□□□ 1.11
PRPF40B-208ENST00000548436 HSP90AB3PQ58FF7 597 aa21.97■■□□□ 1.11
PRPF40B-208ENST00000548436 FAM173BQ6P4H8 233 aa21.97■■□□□ 1.11
PRPF40B-208ENST00000548436 DHX32Q7L7V1 743 aaKnown RBP21.97■■□□□ 1.11
PRPF40B-208ENST00000548436 NWD2Q9ULI1 1742 aa21.97■■□□□ 1.11
PRPF40B-208ENST00000548436 HMGB1P09429 215 aaKnown RBP21.97■■□□□ 1.11
PRPF40B-208ENST00000548436 AHDC1Q5TGY3 1603 aaPredicted RBP21.97■■□□□ 1.11
PRPF40B-208ENST00000548436 UBAP1LF5GYI3 381 aa21.96■■□□□ 1.11
PRPF40B-208ENST00000548436 CTSWP56202 376 aa21.96■■□□□ 1.11
PRPF40B-208ENST00000548436 E7EWF7 191 aa21.95■■□□□ 1.11
PRPF40B-208ENST00000548436 EXOSC10Q01780 885 aaKnown RBP21.95■■□□□ 1.11
PRPF40B-208ENST00000548436 SCRN1Q12765 414 aa21.95■■□□□ 1.11
PRPF40B-208ENST00000548436 IRS4O14654 1257 aaPredicted RBP21.95■■□□□ 1.1
PRPF40B-208ENST00000548436 ZAP70P43403 619 aa21.95■■□□□ 1.1
PRPF40B-208ENST00000548436 METTL24Q5JXM2 366 aa21.95■■□□□ 1.1
PRPF40B-208ENST00000548436 PI16Q6UXB8 463 aa21.95■■□□□ 1.1
PRPF40B-208ENST00000548436 LDHAL6AQ6ZMR3 332 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms