RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 INTS4Q96HW7 963 aaKnown RBP25.16■■□□□ 1.62
RITA1-201ENST00000548278 NIP7Q9Y221 180 aaKnown RBP eCLIP25.16■■□□□ 1.62
RITA1-201ENST00000548278 ZKSCAN1P17029 563 aaPredicted RBP25.15■■□□□ 1.62
RITA1-201ENST00000548278 HSPA1LP34931 641 aa25.15■■□□□ 1.62
RITA1-201ENST00000548278 MCMDC2Q4G0Z9 681 aa25.15■■□□□ 1.62
RITA1-201ENST00000548278 CCDC158Q5M9N0 1113 aa25.15■■□□□ 1.62
RITA1-201ENST00000548278 CLEC17AQ6ZS10 378 aa25.15■■□□□ 1.62
RITA1-201ENST00000548278 GBP4Q96PP9 640 aa25.15■■□□□ 1.62
RITA1-201ENST00000548278 ZSWIM6Q9HCJ5 1215 aa25.15■■□□□ 1.62
RITA1-201ENST00000548278 CNNM1Q9NRU3 951 aa25.15■■□□□ 1.62
RITA1-201ENST00000548278 DDX60Q8IY21 1712 aaKnown RBP25.15■■□□□ 1.62
RITA1-201ENST00000548278 CNTNAP4Q9C0A0 1308 aa25.15■■□□□ 1.62
RITA1-201ENST00000548278 DDX11L8A8MPP1 907 aa25.14■■□□□ 1.62
RITA1-201ENST00000548278 NTSR2O95665 410 aa25.14■■□□□ 1.62
RITA1-201ENST00000548278 KCNQ4P56696 695 aa25.14■■□□□ 1.62
RITA1-201ENST00000548278 GJD4Q96KN9 370 aaPredicted RBP25.14■■□□□ 1.62
RITA1-201ENST00000548278 JAKMIP1Q96N16 626 aaKnown RBP25.14■■□□□ 1.62
RITA1-201ENST00000548278 FAM177BA6PVY3 158 aa25.14■■□□□ 1.61
RITA1-201ENST00000548278 ATP2B3Q16720 1220 aa25.14■■□□□ 1.61
RITA1-201ENST00000548278 GORABQ5T7V8 394 aa25.14■■□□□ 1.61
RITA1-201ENST00000548278 MEX3CQ5U5Q3 659 aaKnown RBP25.14■■□□□ 1.61
RITA1-201ENST00000548278 USPL1Q5W0Q7 1092 aa25.14■■□□□ 1.61
RITA1-201ENST00000548278 AK2P54819 239 aa25.13■■□□□ 1.61
RITA1-201ENST00000548278 TTC39AQ5SRH9 613 aa25.13■■□□□ 1.61
RITA1-201ENST00000548278 CLEC4GQ6UXB4 293 aa25.13■■□□□ 1.61
RITA1-201ENST00000548278 SEC62Q99442 399 aaKnown RBP25.13■■□□□ 1.61
RITA1-201ENST00000548278 ZNF652Q9Y2D9 606 aa25.13■■□□□ 1.61
RITA1-201ENST00000548278 CPA1P15085 419 aa25.13■■□□□ 1.61
RITA1-201ENST00000548278 PKP1Q13835 747 aa25.13■■□□□ 1.61
RITA1-201ENST00000548278 RPAP1Q9BWH6 1393 aaPredicted RBP25.12■■□□□ 1.61
RITA1-201ENST00000548278 LAMB2P55268 1798 aa25.12■■□□□ 1.61
RITA1-201ENST00000548278 ABCC12Q96J65 1359 aa25.12■■□□□ 1.61
RITA1-201ENST00000548278 VPS53Q5VIR6 699 aa25.11■■□□□ 1.61
RITA1-201ENST00000548278 RNF20Q5VTR2 975 aa25.11■■□□□ 1.61
RITA1-201ENST00000548278 CCDC129Q6ZRS4 1044 aa25.11■■□□□ 1.61
RITA1-201ENST00000548278 RUFY3Q7L099 469 aa25.11■■□□□ 1.61
RITA1-201ENST00000548278 HELLSQ9NRZ9 838 aa25.11■■□□□ 1.61
RITA1-201ENST00000548278 CYP46A1Q9Y6A2 500 aa25.11■■□□□ 1.61
RITA1-201ENST00000548278 AFF2P51816 1311 aa25.11■■□□□ 1.61
RITA1-201ENST00000548278 ZMYM1Q5SVZ6 1142 aa25.11■■□□□ 1.61
RITA1-201ENST00000548278 FAM182BQ5T319 152 aa25.11■■□□□ 1.61
RITA1-201ENST00000548278 PDE8BO95263 885 aa25.1■■□□□ 1.61
RITA1-201ENST00000548278 TSGA10IPQ3SY00 556 aa25.1■■□□□ 1.61
RITA1-201ENST00000548278 RC3H1Q5TC82 1133 aaKnown RBP25.1■■□□□ 1.61
RITA1-201ENST00000548278 HMG20BQ9P0W2 317 aa25.1■■□□□ 1.61
RITA1-201ENST00000548278 LIMCH1Q9UPQ0 1083 aa25.1■■□□□ 1.61
RITA1-201ENST00000548278 PDRG1Q9NUG6 133 aa25.09■■□□□ 1.61
RITA1-201ENST00000548278 HSP90B1P14625 803 aaKnown RBP25.09■■□□□ 1.61
RITA1-201ENST00000548278 FKBP4Q02790 459 aaKnown RBP eCLIP25.09■■□□□ 1.61
RITA1-201ENST00000548278 SCARF1Q14162 830 aa25.09■■□□□ 1.61
RITA1-201ENST00000548278 SLFNL1Q499Z3 407 aa25.09■■□□□ 1.61
RITA1-201ENST00000548278 ZDHHC9Q9Y397 364 aa25.09■■□□□ 1.61
RITA1-201ENST00000548278 ATRNO75882 1429 aa25.09■■□□□ 1.61
RITA1-201ENST00000548278 RGL2O15211 777 aa25.08■■□□□ 1.61
RITA1-201ENST00000548278 RNF113AO15541 343 aaKnown RBP25.08■■□□□ 1.61
RITA1-201ENST00000548278 ONECUT3O60422 494 aaPredicted RBP25.08■■□□□ 1.61
RITA1-201ENST00000548278 PSMA5P28066 241 aa25.08■■□□□ 1.61
RITA1-201ENST00000548278 TAF6LQ9Y6J9 622 aa25.08■■□□□ 1.61
RITA1-201ENST00000548278 MROH5Q6ZUA9 1318 aa25.08■■□□□ 1.61
RITA1-201ENST00000548278 RTL9Q8NET4 1388 aa25.08■■□□□ 1.61
RITA1-201ENST00000548278 TRAK2O60296 914 aa25.07■■□□□ 1.6
RITA1-201ENST00000548278 CCDC152Q4G0S7 254 aa25.07■■□□□ 1.6
RITA1-201ENST00000548278 ZNF512BQ96KM6 892 aaPredicted RBP25.07■■□□□ 1.6
RITA1-201ENST00000548278 SEC31BQ9NQW1 1179 aa25.07■■□□□ 1.6
RITA1-201ENST00000548278 AKAP11Q9UKA4 1901 aa25.07■■□□□ 1.6
RITA1-201ENST00000548278 U3KPZ7 1027 aaPredicted RBP25.07■■□□□ 1.6
RITA1-201ENST00000548278 SBF2Q86WG5 1849 aa25.07■■□□□ 1.6
RITA1-201ENST00000548278 SCN7AQ01118 1682 aa25.07■■□□□ 1.6
RITA1-201ENST00000548278 BAG4O95429 457 aaKnown RBP25.06■■□□□ 1.6
RITA1-201ENST00000548278 RPS6KA4O75676 772 aa25.05■■□□□ 1.6
RITA1-201ENST00000548278 FGFR2P21802 821 aa25.05■■□□□ 1.6
RITA1-201ENST00000548278 ZAP70P43403 619 aa25.05■■□□□ 1.6
RITA1-201ENST00000548278 LARP6Q9BRS8 491 aaKnown RBP25.05■■□□□ 1.6
RITA1-201ENST00000548278 COL9A3Q14050 684 aaPredicted RBP25.05■■□□□ 1.6
RITA1-201ENST00000548278 PUM3Q15397 648 aaKnown RBP25.05■■□□□ 1.6
RITA1-201ENST00000548278 BCL2L12Q9HB09 334 aa25.05■■□□□ 1.6
RITA1-201ENST00000548278 LY75O60449 1722 aa25.04■■□□□ 1.6
RITA1-201ENST00000548278 MCAMP43121 646 aa25.04■■□□□ 1.6
RITA1-201ENST00000548278 SMIM5Q71RC9 77 aa25.04■■□□□ 1.6
RITA1-201ENST00000548278 CCNL1Q9UK58 526 aaPredicted RBP25.04■■□□□ 1.6
RITA1-201ENST00000548278 TRPC5Q9UL62 973 aaPredicted RBP25.04■■□□□ 1.6
RITA1-201ENST00000548278 ARAP2Q8WZ64 1704 aa25.04■■□□□ 1.6
RITA1-201ENST00000548278 MAST3O60307 1309 aa25.03■■□□□ 1.6
RITA1-201ENST00000548278 LRRFIP1Q32MZ4 808 aaKnown RBP25.03■■□□□ 1.6
RITA1-201ENST00000548278 LPIN2Q92539 896 aa25.03■■□□□ 1.6
RITA1-201ENST00000548278 DSCC1Q9BVC3 393 aa25.03■■□□□ 1.6
RITA1-201ENST00000548278 PTMSP20962 102 aa25.03■■□□□ 1.6
RITA1-201ENST00000548278 BLOC1S2Q6QNY1 142 aa25.03■■□□□ 1.6
RITA1-201ENST00000548278 PI16Q6UXB8 463 aa25.03■■□□□ 1.6
RITA1-201ENST00000548278 HELBQ8NG08 1087 aaPredicted RBP25.03■■□□□ 1.6
RITA1-201ENST00000548278 MPHOSPH8Q99549 860 aa25.03■■□□□ 1.6
RITA1-201ENST00000548278 NARFQ9UHQ1 456 aa25.03■■□□□ 1.6
RITA1-201ENST00000548278 RPS6KB1P23443 525 aa25.02■■□□□ 1.6
RITA1-201ENST00000548278 KRT32Q14532 448 aa25.02■■□□□ 1.6
RITA1-201ENST00000548278 SEPT12Q8IYM1 358 aa25.02■■□□□ 1.6
RITA1-201ENST00000548278 ALDH8A1Q9H2A2 487 aaPredicted RBP25.02■■□□□ 1.6
RITA1-201ENST00000548278 TAF1LQ8IZX4 1826 aa25.02■■□□□ 1.6
RITA1-201ENST00000548278 LARGE1O95461 756 aa25.01■■□□□ 1.59
RITA1-201ENST00000548278 BRD1O95696 1058 aa25.01■■□□□ 1.59
RITA1-201ENST00000548278 ZFYP08048 801 aaPredicted RBP25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms