RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 PPIP5K2O43314 1243 aa13.8□□□□□ -0.2
GCN1-202ENST00000547263 LARGE2Q8N3Y3 721 aa13.8□□□□□ -0.2
GCN1-202ENST00000547263 NSFL1CQ9UNZ2 370 aaKnown RBP13.8□□□□□ -0.2
GCN1-202ENST00000547263 ANKRD18BA2A2Z9 1011 aa13.79□□□□□ -0.2
GCN1-202ENST00000547263 YDJCA8MPS7 323 aa13.79□□□□□ -0.2
GCN1-202ENST00000547263 DDNO94850 711 aaPredicted RBP13.79□□□□□ -0.2
GCN1-202ENST00000547263 GPC2Q8N158 579 aa13.79□□□□□ -0.2
GCN1-202ENST00000547263 ZNF526Q8TF50 670 aaPredicted RBP13.79□□□□□ -0.2
GCN1-202ENST00000547263 JDP2Q8WYK2 163 aa13.79□□□□□ -0.2
GCN1-202ENST00000547263 BICC1Q9H694 974 aaKnown RBP13.79□□□□□ -0.2
GCN1-202ENST00000547263 ZNRF3Q9ULT6 936 aa13.79□□□□□ -0.2
GCN1-202ENST00000547263 MED23Q9ULK4 1368 aa13.79□□□□□ -0.2
GCN1-202ENST00000547263 VEGFAP15692 232 aaPredicted RBP13.78□□□□□ -0.2
GCN1-202ENST00000547263 ATP2B4P23634 1241 aa13.78□□□□□ -0.2
GCN1-202ENST00000547263 IGHMBP2P38935 993 aaKnown RBP13.78□□□□□ -0.2
GCN1-202ENST00000547263 RFX5P48382 616 aaPredicted RBP13.78□□□□□ -0.2
GCN1-202ENST00000547263 C1QTNF8P60827 252 aa13.78□□□□□ -0.2
GCN1-202ENST00000547263 IFIT5Q13325 482 aaKnown RBP13.78□□□□□ -0.2
GCN1-202ENST00000547263 C15orf52Q6ZUT6 534 aaKnown RBP13.78□□□□□ -0.2
GCN1-202ENST00000547263 TNNQ9UQP3 1299 aa13.78□□□□□ -0.2
GCN1-202ENST00000547263 LEMD3Q9Y2U8 911 aa13.78□□□□□ -0.2
GCN1-202ENST00000547263 TOMM70O94826 608 aa13.77□□□□□ -0.21
GCN1-202ENST00000547263 CXCL9Q07325 125 aa13.77□□□□□ -0.21
GCN1-202ENST00000547263 WASHC4Q2M389 1173 aa13.77□□□□□ -0.21
GCN1-202ENST00000547263 ZKSCAN2Q63HK3 967 aa13.77□□□□□ -0.21
GCN1-202ENST00000547263 NIM1KQ8IY84 436 aa13.77□□□□□ -0.21
GCN1-202ENST00000547263 EYA3Q99504 573 aa13.77□□□□□ -0.21
GCN1-202ENST00000547263 RRAGCQ9HB90 399 aa13.77□□□□□ -0.21
GCN1-202ENST00000547263 GGA1Q9UJY5 639 aa13.77□□□□□ -0.21
GCN1-202ENST00000547263 WTIPA6NIX2 430 aaPredicted RBP13.76□□□□□ -0.21
GCN1-202ENST00000547263 CHRNDQ07001 517 aa13.76□□□□□ -0.21
GCN1-202ENST00000547263 MTX1Q13505 466 aa13.76□□□□□ -0.21
GCN1-202ENST00000547263 RBM46Q8TBY0 533 aaKnown RBP13.76□□□□□ -0.21
GCN1-202ENST00000547263 MEIS3Q99687 375 aa13.76□□□□□ -0.21
GCN1-202ENST00000547263 ANKRD2Q9GZV1 360 aa13.76□□□□□ -0.21
GCN1-202ENST00000547263 RIPOR2Q9Y4F9 1068 aa13.76□□□□□ -0.21
GCN1-202ENST00000547263 UFL1O94874 794 aa13.75□□□□□ -0.21
GCN1-202ENST00000547263 SCNN1DP51172 638 aa13.75□□□□□ -0.21
GCN1-202ENST00000547263 EIF6P56537 245 aaKnown RBP13.75□□□□□ -0.21
GCN1-202ENST00000547263 CCDC57Q2TAC2 916 aa13.75□□□□□ -0.21
GCN1-202ENST00000547263 MPHOSPH8Q99549 860 aa13.75□□□□□ -0.21
GCN1-202ENST00000547263 IQCA1LA6NCM1 817 aa13.74□□□□□ -0.21
GCN1-202ENST00000547263 C6orf229H3BNL8 230 aa13.74□□□□□ -0.21
GCN1-202ENST00000547263 UBTFL1P0CB47 393 aaPredicted RBP13.74□□□□□ -0.21
GCN1-202ENST00000547263 VGLL2Q8N8G2 317 aa13.74□□□□□ -0.21
GCN1-202ENST00000547263 ZNF594Q96JF6 807 aaPredicted RBP13.74□□□□□ -0.21
GCN1-202ENST00000547263 GPR101Q96P66 508 aaPredicted RBP13.74□□□□□ -0.21
GCN1-202ENST00000547263 ZC3H12CQ9C0D7 883 aaKnown RBP13.74□□□□□ -0.21
GCN1-202ENST00000547263 TAF1DQ9H5J8 278 aaPredicted RBP13.74□□□□□ -0.21
GCN1-202ENST00000547263 ANKIB1Q9P2G1 1089 aa13.74□□□□□ -0.21
GCN1-202ENST00000547263 ZNF804BA4D1E1 1349 aa13.73□□□□□ -0.21
GCN1-202ENST00000547263 GNAI3P08754 354 aa13.73□□□□□ -0.21
GCN1-202ENST00000547263 RLBP1P12271 317 aa13.73□□□□□ -0.21
GCN1-202ENST00000547263 PTPN12Q05209 780 aaKnown RBP13.73□□□□□ -0.21
GCN1-202ENST00000547263 CIAPIN1Q6FI81 312 aa13.73□□□□□ -0.21
GCN1-202ENST00000547263 LDHAL6AQ6ZMR3 332 aa13.73□□□□□ -0.21
GCN1-202ENST00000547263 TXNRD3Q86VQ6 643 aa13.73□□□□□ -0.21
GCN1-202ENST00000547263 TMEM57Q8N5G2 664 aa13.73□□□□□ -0.21
GCN1-202ENST00000547263 FBXO3Q9UK99 471 aa13.73□□□□□ -0.21
GCN1-202ENST00000547263 HDAC5Q9UQL6 1122 aa13.73□□□□□ -0.21
GCN1-202ENST00000547263 ECE2O60344 883 aa13.72□□□□□ -0.21
GCN1-202ENST00000547263 VIL1P09327 827 aaKnown RBP13.72□□□□□ -0.21
GCN1-202ENST00000547263 FSTL1Q12841 308 aa13.72□□□□□ -0.21
GCN1-202ENST00000547263 PODNQ7Z5L7 613 aa13.72□□□□□ -0.21
GCN1-202ENST00000547263 DPF2Q92785 391 aa13.72□□□□□ -0.21
GCN1-202ENST00000547263 FRAT1Q92837 279 aaPredicted RBP13.72□□□□□ -0.21
GCN1-202ENST00000547263 PUS3Q9BZE2 481 aaKnown RBP13.72□□□□□ -0.21
GCN1-202ENST00000547263 DBNDD1Q9H9R9 158 aa13.72□□□□□ -0.21
GCN1-202ENST00000547263 GPRC5DQ9NZD1 345 aa13.72□□□□□ -0.21
GCN1-202ENST00000547263 HACL1Q9UJ83 578 aa13.72□□□□□ -0.21
GCN1-202ENST00000547263 CHMP3Q9Y3E7 222 aa13.72□□□□□ -0.21
GCN1-202ENST00000547263 LRRFIP2Q9Y608 721 aaKnown RBP13.72□□□□□ -0.21
GCN1-202ENST00000547263 RIMBP2O15034 1052 aa13.71□□□□□ -0.21
GCN1-202ENST00000547263 TNIP1Q15025 636 aa13.71□□□□□ -0.21
GCN1-202ENST00000547263 DZIP1LQ8IYY4 767 aaKnown RBP13.71□□□□□ -0.21
GCN1-202ENST00000547263 GMLQ99445 158 aa13.71□□□□□ -0.21
GCN1-202ENST00000547263 COA1Q9GZY4 146 aa13.71□□□□□ -0.21
GCN1-202ENST00000547263 COPRSQ9NQ92 184 aa13.71□□□□□ -0.21
GCN1-202ENST00000547263 RCAN3Q9UKA8 241 aa13.71□□□□□ -0.21
GCN1-202ENST00000547263 ARAP2Q8WZ64 1704 aa13.7□□□□□ -0.22
GCN1-202ENST00000547263 MROH5Q6ZUA9 1318 aa13.7□□□□□ -0.22
GCN1-202ENST00000547263 SNAP23O00161 211 aa13.7□□□□□ -0.22
GCN1-202ENST00000547263 PSMD14O00487 310 aa13.7□□□□□ -0.22
GCN1-202ENST00000547263 ZBTB7BO15156 539 aaPredicted RBP13.7□□□□□ -0.22
GCN1-202ENST00000547263 ZBTB22O15209 634 aa13.7□□□□□ -0.22
GCN1-202ENST00000547263 RPS12P25398 132 aaKnown RBP13.7□□□□□ -0.22
GCN1-202ENST00000547263 KLRK1P26718 216 aa13.7□□□□□ -0.22
GCN1-202ENST00000547263 EPHX2P34913 555 aa13.7□□□□□ -0.22
GCN1-202ENST00000547263 UBE4AQ14139 1066 aa13.7□□□□□ -0.22
GCN1-202ENST00000547263 DOK7Q18PE1 504 aa13.7□□□□□ -0.22
GCN1-202ENST00000547263 LRRC24Q50LG9 513 aa13.7□□□□□ -0.22
GCN1-202ENST00000547263 ATG9AQ7Z3C6 839 aa13.7□□□□□ -0.22
GCN1-202ENST00000547263 CLUAP1Q96AJ1 413 aa13.7□□□□□ -0.22
GCN1-202ENST00000547263 KCNQ5Q9NR82 932 aa13.7□□□□□ -0.22
GCN1-202ENST00000547263 EYA2O00167 538 aa13.69□□□□□ -0.22
GCN1-202ENST00000547263 TAF5LO75529 589 aa13.69□□□□□ -0.22
GCN1-202ENST00000547263 RAD17O75943 681 aa13.69□□□□□ -0.22
GCN1-202ENST00000547263 CIAO1O76071 339 aa13.69□□□□□ -0.22
GCN1-202ENST00000547263 POTEIP0CG38 1075 aa13.69□□□□□ -0.22
GCN1-202ENST00000547263 POTEJP0CG39 1038 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms