RNA–Protein interactions for RNA: ENST00000545021.2

LYSMD4-210, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-210ENST00000545021 KRT24Q2M2I5 525 aa22.55■■□□□ 1.2
LYSMD4-210ENST00000545021 TSHZ3Q63HK5 1081 aa22.55■■□□□ 1.2
LYSMD4-210ENST00000545021 SNX14Q9Y5W7 946 aa22.55■■□□□ 1.2
LYSMD4-210ENST00000545021 GOLGA6L19H0YKK7 550 aa22.54■■□□□ 1.2
LYSMD4-210ENST00000545021 JRKLQ9Y4A0 524 aa22.54■■□□□ 1.2
LYSMD4-210ENST00000545021 IQCB1Q15051 598 aa22.53■■□□□ 1.2
LYSMD4-210ENST00000545021 STAP2Q9UGK3 403 aa22.53■■□□□ 1.2
LYSMD4-210ENST00000545021 CHMP3Q9Y3E7 222 aa22.53■■□□□ 1.2
LYSMD4-210ENST00000545021 CASTP20810 708 aaKnown RBP22.53■■□□□ 1.2
LYSMD4-210ENST00000545021 GSDMDP57764 484 aa22.53■■□□□ 1.2
LYSMD4-210ENST00000545021 UBXN4Q92575 508 aa22.53■■□□□ 1.2
LYSMD4-210ENST00000545021 BTG4Q9NY30 223 aa22.53■■□□□ 1.2
LYSMD4-210ENST00000545021 COL5A2P05997 1499 aaPredicted RBP22.53■■□□□ 1.2
LYSMD4-210ENST00000545021 FYB1O15117 783 aa22.52■■□□□ 1.2
LYSMD4-210ENST00000545021 TPM1P09493 284 aa22.52■■□□□ 1.2
LYSMD4-210ENST00000545021 NLRP6P59044 892 aa22.52■■□□□ 1.2
LYSMD4-210ENST00000545021 REXO1L1PQ8IX06 675 aa22.52■■□□□ 1.2
LYSMD4-210ENST00000545021 PHACTR3Q96KR7 559 aa22.52■■□□□ 1.2
LYSMD4-210ENST00000545021 PARP4Q9UKK3 1724 aaKnown RBP22.52■■□□□ 1.2
LYSMD4-210ENST00000545021 VPS37CA5D8V6 355 aaPredicted RBP22.52■■□□□ 1.2
LYSMD4-210ENST00000545021 FAM208AQ9UK61 1670 aaKnown RBP22.52■■□□□ 1.2
LYSMD4-210ENST00000545021 PSDA5PKW4 1024 aaPredicted RBP22.51■■□□□ 1.19
LYSMD4-210ENST00000545021 SCAND2PQ9GZW5 306 aaPredicted RBP22.51■■□□□ 1.19
LYSMD4-210ENST00000545021 KCNJ6P48051 423 aa22.51■■□□□ 1.19
LYSMD4-210ENST00000545021 LMOD3Q0VAK6 560 aa22.51■■□□□ 1.19
LYSMD4-210ENST00000545021 SMC1AQ14683 1233 aaKnown RBP22.51■■□□□ 1.19
LYSMD4-210ENST00000545021 TTC31Q49AM3 519 aaPredicted RBP22.51■■□□□ 1.19
LYSMD4-210ENST00000545021 SH2B1Q9NRF2 756 aaPredicted RBP22.51■■□□□ 1.19
LYSMD4-210ENST00000545021 AOX1Q06278 1338 aa22.5■■□□□ 1.19
LYSMD4-210ENST00000545021 GOLGA6L4A6NEF3 574 aa22.5■■□□□ 1.19
LYSMD4-210ENST00000545021 TBC1D8O95759 1140 aa22.5■■□□□ 1.19
LYSMD4-210ENST00000545021 MAGEA9P43362 315 aa22.5■■□□□ 1.19
LYSMD4-210ENST00000545021 CCDC83Q8IWF9 413 aa22.5■■□□□ 1.19
LYSMD4-210ENST00000545021 PPP1R13BQ96KQ4 1090 aa22.5■■□□□ 1.19
LYSMD4-210ENST00000545021 ZSCAN31Q96LW9 406 aaPredicted RBP22.5■■□□□ 1.19
LYSMD4-210ENST00000545021 LRRCC1Q9C099 1032 aa22.5■■□□□ 1.19
LYSMD4-210ENST00000545021 IL25Q9H293 177 aa22.5■■□□□ 1.19
LYSMD4-210ENST00000545021 LARGE1O95461 756 aa22.5■■□□□ 1.19
LYSMD4-210ENST00000545021 CCDC158Q5M9N0 1113 aa22.5■■□□□ 1.19
LYSMD4-210ENST00000545021 SRRTQ9BXP5 876 aaKnown RBP22.5■■□□□ 1.19
LYSMD4-210ENST00000545021 USP16Q9Y5T5 823 aa22.5■■□□□ 1.19
LYSMD4-210ENST00000545021 LTN1O94822 1766 aa22.49■■□□□ 1.19
LYSMD4-210ENST00000545021 IVLP07476 585 aa22.49■■□□□ 1.19
LYSMD4-210ENST00000545021 ACTN2P35609 894 aa22.49■■□□□ 1.19
LYSMD4-210ENST00000545021 E4F1Q66K89 784 aaPredicted RBP22.49■■□□□ 1.19
LYSMD4-210ENST00000545021 HYPKQ9NX55 129 aa22.49■■□□□ 1.19
LYSMD4-210ENST00000545021 SPATA31A1Q5TZJ5 1347 aa22.49■■□□□ 1.19
LYSMD4-210ENST00000545021 ZCCHC17Q9NP64 241 aaKnown RBP22.49■■□□□ 1.19
LYSMD4-210ENST00000545021 SASH3O75995 380 aa22.48■■□□□ 1.19
LYSMD4-210ENST00000545021 BARGINQ6ZT62 677 aa22.48■■□□□ 1.19
LYSMD4-210ENST00000545021 ARHGEF25Q86VW2 580 aa22.48■■□□□ 1.19
LYSMD4-210ENST00000545021 OSBPL5Q9H0X9 879 aaPredicted RBP22.48■■□□□ 1.19
LYSMD4-210ENST00000545021 APPP05067 770 aa22.48■■□□□ 1.19
LYSMD4-210ENST00000545021 UPF1Q92900 1129 aaKnown RBP eCLIP22.48■■□□□ 1.19
LYSMD4-210ENST00000545021 ZNF622Q969S3 477 aaKnown RBP eCLIP22.48■■□□□ 1.19
LYSMD4-210ENST00000545021 LARP6Q9BRS8 491 aaKnown RBP22.48■■□□□ 1.19
LYSMD4-210ENST00000545021 THRAP3Q9Y2W1 955 aaKnown RBP22.48■■□□□ 1.19
LYSMD4-210ENST00000545021 PHLPP2Q6ZVD8 1323 aa22.47■■□□□ 1.19
LYSMD4-210ENST00000545021 TADA3O75528 432 aa22.47■■□□□ 1.19
LYSMD4-210ENST00000545021 SEC31AO94979 1220 aaKnown RBP22.47■■□□□ 1.19
LYSMD4-210ENST00000545021 ATP2B1P20020 1258 aa22.47■■□□□ 1.19
LYSMD4-210ENST00000545021 TSGA10IPQ3SY00 556 aa22.47■■□□□ 1.19
LYSMD4-210ENST00000545021 EFCAB8A8MWE9 144 aa22.47■■□□□ 1.19
LYSMD4-210ENST00000545021 NUTM2GQ5VZR2 741 aa22.47■■□□□ 1.19
LYSMD4-210ENST00000545021 IMPACTQ9P2X3 320 aa22.47■■□□□ 1.19
LYSMD4-210ENST00000545021 CRB1P82279 1406 aa22.46■■□□□ 1.19
LYSMD4-210ENST00000545021 CC2D1AQ6P1N0 951 aaPredicted RBP22.46■■□□□ 1.19
LYSMD4-210ENST00000545021 PACS2Q86VP3 889 aa22.46■■□□□ 1.19
LYSMD4-210ENST00000545021 CCDC125Q86Z20 511 aa22.46■■□□□ 1.19
LYSMD4-210ENST00000545021 RASEFQ8IZ41 740 aa22.46■■□□□ 1.19
LYSMD4-210ENST00000545021 SPATA32Q96LK8 384 aa22.46■■□□□ 1.19
LYSMD4-210ENST00000545021 ADAM21Q9UKJ8 722 aa22.46■■□□□ 1.19
LYSMD4-210ENST00000545021 SGSM2O43147 1006 aa22.45■■□□□ 1.18
LYSMD4-210ENST00000545021 NR1I2O75469 434 aa22.45■■□□□ 1.18
LYSMD4-210ENST00000545021 VPS53Q5VIR6 699 aa22.45■■□□□ 1.18
LYSMD4-210ENST00000545021 LMAN1P49257 510 aa22.45■■□□□ 1.18
LYSMD4-210ENST00000545021 ZC3H6P61129 1189 aaKnown RBP22.45■■□□□ 1.18
LYSMD4-210ENST00000545021 MNS1Q8NEH6 495 aa22.45■■□□□ 1.18
LYSMD4-210ENST00000545021 LSG1Q9H089 658 aaKnown RBP22.45■■□□□ 1.18
LYSMD4-210ENST00000545021 LEO1Q8WVC0 666 aaPredicted RBP22.44■■□□□ 1.18
LYSMD4-210ENST00000545021 RGPD1P0DJD0 1748 aa22.44■■□□□ 1.18
LYSMD4-210ENST00000545021 RPS6KA5O75582 802 aa22.43■■□□□ 1.18
LYSMD4-210ENST00000545021 STX1AQ16623 288 aa22.43■■□□□ 1.18
LYSMD4-210ENST00000545021 LARP1BQ659C4 914 aaKnown RBP22.43■■□□□ 1.18
LYSMD4-210ENST00000545021 DLG5Q8TDM6 1919 aa22.43■■□□□ 1.18
LYSMD4-210ENST00000545021 RGPD5Q99666 1765 aa22.43■■□□□ 1.18
LYSMD4-210ENST00000545021 PDCP20941 246 aa22.43■■□□□ 1.18
LYSMD4-210ENST00000545021 ETF1P62495 437 aaKnown RBP22.43■■□□□ 1.18
LYSMD4-210ENST00000545021 ST3GAL1Q11201 340 aa22.43■■□□□ 1.18
LYSMD4-210ENST00000545021 LEKR1Q6ZMV7 388 aa22.43■■□□□ 1.18
LYSMD4-210ENST00000545021 C11orf57Q6ZUT1 292 aaPredicted RBP22.43■■□□□ 1.18
LYSMD4-210ENST00000545021 CDC37L1Q7L3B6 337 aa22.43■■□□□ 1.18
LYSMD4-210ENST00000545021 CCDC150Q8NCX0 1101 aa22.43■■□□□ 1.18
LYSMD4-210ENST00000545021 DEF6Q9H4E7 631 aa22.43■■□□□ 1.18
LYSMD4-210ENST00000545021 DHX8Q14562 1220 aaKnown RBP22.42■■□□□ 1.18
LYSMD4-210ENST00000545021 SUGP1Q8IWZ8 645 aaKnown RBP22.42■■□□□ 1.18
LYSMD4-210ENST00000545021 SEPT12Q8IYM1 358 aa22.42■■□□□ 1.18
LYSMD4-210ENST00000545021 DRC1Q96MC2 740 aa22.42■■□□□ 1.18
LYSMD4-210ENST00000545021 TOMM22Q9NS69 142 aa22.42■■□□□ 1.18
LYSMD4-210ENST00000545021 HMOX1P09601 288 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms