RNA–Protein interactions for RNA: ENST00000543898.5

ABCB1-210, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5 BASIC

Gene ABCB1, Length 4,524 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-210ENST00000543898 CLSTN1O94985 981 aa9.93□□□□□ -0.82
ABCB1-210ENST00000543898 CYB5RLQ6IPT4 315 aa9.93□□□□□ -0.82
ABCB1-210ENST00000543898 TTC5Q8N0Z6 440 aa9.93□□□□□ -0.82
ABCB1-210ENST00000543898 EAF2Q96CJ1 260 aaPredicted RBP9.93□□□□□ -0.82
ABCB1-210ENST00000543898 ORC3Q9UBD5 711 aaPredicted RBP9.93□□□□□ -0.82
ABCB1-210ENST00000543898 BANK1Q8NDB2 785 aa9.93□□□□□ -0.82
ABCB1-210ENST00000543898 CCDC12Q8WUD4 166 aaPredicted RBP9.93□□□□□ -0.82
ABCB1-210ENST00000543898 MRFAP1L1Q96HT8 127 aa9.93□□□□□ -0.82
ABCB1-210ENST00000543898 BICC1Q9H694 974 aaKnown RBP9.93□□□□□ -0.82
ABCB1-210ENST00000543898 LGR6Q9HBX8 967 aa9.93□□□□□ -0.82
ABCB1-210ENST00000543898 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.93□□□□□ -0.82
ABCB1-210ENST00000543898 GRM8O00222 908 aa9.92□□□□□ -0.82
ABCB1-210ENST00000543898 KCNQ3O43525 872 aa9.92□□□□□ -0.82
ABCB1-210ENST00000543898 TMED8Q6PL24 325 aaPredicted RBP9.92□□□□□ -0.82
ABCB1-210ENST00000543898 FUCA2Q9BTY2 467 aa9.92□□□□□ -0.82
ABCB1-210ENST00000543898 ELP1O95163 1332 aa9.92□□□□□ -0.82
ABCB1-210ENST00000543898 PIP4K2AP48426 406 aaPredicted RBP9.92□□□□□ -0.82
ABCB1-210ENST00000543898 FAM69CQ0P6D2 419 aa9.92□□□□□ -0.82
ABCB1-210ENST00000543898 DHX8Q14562 1220 aaKnown RBP9.92□□□□□ -0.82
ABCB1-210ENST00000543898 KARSQ15046 597 aaKnown RBP9.92□□□□□ -0.82
ABCB1-210ENST00000543898 AXDND1Q5T1B0 1012 aaPredicted RBP9.92□□□□□ -0.82
ABCB1-210ENST00000543898 KLHL10Q6JEL2 608 aa9.92□□□□□ -0.82
ABCB1-210ENST00000543898 PLA2G4DQ86XP0 818 aa9.92□□□□□ -0.82
ABCB1-210ENST00000543898 TXLNBQ8N3L3 684 aa9.92□□□□□ -0.82
ABCB1-210ENST00000543898 JMYQ8N9B5 988 aa9.92□□□□□ -0.82
ABCB1-210ENST00000543898 PHACTR2O75167 634 aa9.92□□□□□ -0.82
ABCB1-210ENST00000543898 SEC31AO94979 1220 aaKnown RBP9.92□□□□□ -0.82
ABCB1-210ENST00000543898 KIF4BQ2VIQ3 1234 aa9.92□□□□□ -0.82
ABCB1-210ENST00000543898 PPFIBP1Q86W92 1011 aa9.92□□□□□ -0.82
ABCB1-210ENST00000543898 MAP4K1Q92918 833 aa9.92□□□□□ -0.82
ABCB1-210ENST00000543898 SEC62Q99442 399 aaKnown RBP9.92□□□□□ -0.82
ABCB1-210ENST00000543898 MORC2Q9Y6X9 1032 aaPredicted RBP9.92□□□□□ -0.82
ABCB1-210ENST00000543898 GLI2P10070 1586 aa9.92□□□□□ -0.82
ABCB1-210ENST00000543898 NECTIN1Q15223 517 aa9.92□□□□□ -0.82
ABCB1-210ENST00000543898 SYCP1Q15431 976 aa9.92□□□□□ -0.82
ABCB1-210ENST00000543898 EFCAB6Q5THR3 1501 aa9.92□□□□□ -0.82
ABCB1-210ENST00000543898 CCDC85AQ96PX6 553 aaPredicted RBP9.92□□□□□ -0.82
ABCB1-210ENST00000543898 TSPYL1Q9H0U9 437 aa9.92□□□□□ -0.82
ABCB1-210ENST00000543898 SNRKQ9NRH2 765 aa9.92□□□□□ -0.82
ABCB1-210ENST00000543898 GOLGA8BA8MQT2 603 aa9.91□□□□□ -0.82
ABCB1-210ENST00000543898 ATP5J2-PTCD1G3V325 749 aa9.91□□□□□ -0.82
ABCB1-210ENST00000543898 PTCD1O75127 700 aaKnown RBP9.91□□□□□ -0.82
ABCB1-210ENST00000543898 JAKMIP3Q5VZ66 844 aa9.91□□□□□ -0.82
ABCB1-210ENST00000543898 SPTLC2O15270 562 aa9.91□□□□□ -0.82
ABCB1-210ENST00000543898 SYKP43405 635 aa9.91□□□□□ -0.82
ABCB1-210ENST00000543898 GOLGA8FQ08AF8 430 aa9.91□□□□□ -0.82
ABCB1-210ENST00000543898 GOLGA8DPQ0D2H9 430 aa9.91□□□□□ -0.82
ABCB1-210ENST00000543898 MCMDC2Q4G0Z9 681 aa9.91□□□□□ -0.82
ABCB1-210ENST00000543898 KSR2Q6VAB6 950 aa9.91□□□□□ -0.82
ABCB1-210ENST00000543898 RASSF8Q8NHQ8 419 aa9.91□□□□□ -0.82
ABCB1-210ENST00000543898 TLR7Q9NYK1 1049 aaKnown RBP9.91□□□□□ -0.82
ABCB1-210ENST00000543898 HNRNPH2P55795 449 aaKnown RBP9.91□□□□□ -0.82
ABCB1-210ENST00000543898 UBE3BQ7Z3V4 1068 aa9.91□□□□□ -0.82
ABCB1-210ENST00000543898 ZNF589Q86UQ0 364 aaPredicted RBP9.91□□□□□ -0.82
ABCB1-210ENST00000543898 CCDC82Q8N4S0 544 aa9.91□□□□□ -0.82
ABCB1-210ENST00000543898 CNNM3Q8NE01 707 aa9.91□□□□□ -0.82
ABCB1-210ENST00000543898 RNF216Q9NWF9 866 aaPredicted RBP9.91□□□□□ -0.82
ABCB1-210ENST00000543898 PUF60Q9UHX1 559 aaKnown RBP9.91□□□□□ -0.82
ABCB1-210ENST00000543898 CPSF1Q10570 1443 aaKnown RBP9.91□□□□□ -0.82
ABCB1-210ENST00000543898 ERLIN1O75477 346 aa9.9□□□□□ -0.82
ABCB1-210ENST00000543898 SLFN14P0C7P3 912 aa9.9□□□□□ -0.82
ABCB1-210ENST00000543898 CLCN6P51797 869 aa9.9□□□□□ -0.82
ABCB1-210ENST00000543898 FANCCQ00597 558 aa9.9□□□□□ -0.82
ABCB1-210ENST00000543898 SAFBQ15424 915 aaKnown RBP eCLIP9.9□□□□□ -0.82
ABCB1-210ENST00000543898 ARHGEF40Q8TER5 1519 aa9.9□□□□□ -0.82
ABCB1-210ENST00000543898 EIF3JO75822 258 aaKnown RBP9.9□□□□□ -0.82
ABCB1-210ENST00000543898 OAS2P29728 719 aaKnown RBP9.9□□□□□ -0.82
ABCB1-210ENST00000543898 TSR1Q2NL82 804 aaKnown RBP9.9□□□□□ -0.82
ABCB1-210ENST00000543898 DHX32Q7L7V1 743 aaKnown RBP9.9□□□□□ -0.82
ABCB1-210ENST00000543898 RBM33Q96EV2 1170 aaKnown RBP9.9□□□□□ -0.82
ABCB1-210ENST00000543898 BEND3Q5T5X7 828 aa9.9□□□□□ -0.82
ABCB1-210ENST00000543898 PPP1R13BQ96KQ4 1090 aa9.9□□□□□ -0.82
ABCB1-210ENST00000543898 ACBD3Q9H3P7 528 aa9.9□□□□□ -0.82
ABCB1-210ENST00000543898 LZTFL1Q9NQ48 299 aa9.9□□□□□ -0.82
ABCB1-210ENST00000543898 VPS18Q9P253 973 aa9.9□□□□□ -0.82
ABCB1-210ENST00000543898 ADGRB2O60241 1585 aa9.9□□□□□ -0.83
ABCB1-210ENST00000543898 ABCC3O15438 1527 aa9.9□□□□□ -0.83
ABCB1-210ENST00000543898 LRRFIP1Q32MZ4 808 aaKnown RBP9.9□□□□□ -0.83
ABCB1-210ENST00000543898 SUCLG2Q96I99 432 aa9.9□□□□□ -0.83
ABCB1-210ENST00000543898 FLT4P35916 1363 aa9.89□□□□□ -0.83
ABCB1-210ENST00000543898 AATKQ6ZMQ8 1374 aa9.89□□□□□ -0.83
ABCB1-210ENST00000543898 KLF18A0A0U1RQI7 1052 aa9.89□□□□□ -0.83
ABCB1-210ENST00000543898 CAPN2P17655 700 aa9.89□□□□□ -0.83
ABCB1-210ENST00000543898 ETF1P62495 437 aaKnown RBP9.89□□□□□ -0.83
ABCB1-210ENST00000543898 DPCR1Q3MIW9 517 aa9.89□□□□□ -0.83
ABCB1-210ENST00000543898 ZCCHC17Q9NP64 241 aaKnown RBP9.89□□□□□ -0.83
ABCB1-210ENST00000543898 COL3A1P02461 1466 aaPredicted RBP9.89□□□□□ -0.83
ABCB1-210ENST00000543898 IRX5P78411 483 aaPredicted RBP9.89□□□□□ -0.83
ABCB1-210ENST00000543898 TFCP2Q12800 502 aa9.89□□□□□ -0.83
ABCB1-210ENST00000543898 RRP12Q5JTH9 1297 aaKnown RBP9.89□□□□□ -0.83
ABCB1-210ENST00000543898 TICAM2Q86XR7 235 aa9.89□□□□□ -0.83
ABCB1-210ENST00000543898 KCNG4Q8TDN1 519 aa9.89□□□□□ -0.83
ABCB1-210ENST00000543898 EPC1Q9H2F5 836 aa9.89□□□□□ -0.83
ABCB1-210ENST00000543898 NLRP2Q9NX02 1062 aa9.89□□□□□ -0.83
ABCB1-210ENST00000543898 MAP3K5Q99683 1374 aa9.89□□□□□ -0.83
ABCB1-210ENST00000543898 ALDH1L1O75891 902 aa9.89□□□□□ -0.83
ABCB1-210ENST00000543898 IFIT1P09914 478 aaKnown RBP9.89□□□□□ -0.83
ABCB1-210ENST00000543898 SCRN1Q12765 414 aa9.89□□□□□ -0.83
ABCB1-210ENST00000543898 SLC39A6Q13433 755 aa9.89□□□□□ -0.83
ABCB1-210ENST00000543898 OSCARQ8IYS5 282 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms