RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 CBX8Q9HC52 389 aa9.51□□□□□ -0.89
PRKAB1-207ENST00000542698 ZSWIM6Q9HCJ5 1215 aa9.51□□□□□ -0.89
PRKAB1-207ENST00000542698 NSFL1CQ9UNZ2 370 aaKnown RBP9.51□□□□□ -0.89
PRKAB1-207ENST00000542698 RGS12O14924 1447 aa9.51□□□□□ -0.89
PRKAB1-207ENST00000542698 SPHKAPQ2M3C7 1700 aa9.51□□□□□ -0.89
PRKAB1-207ENST00000542698 ERICH4A6NGS2 130 aa9.5□□□□□ -0.89
PRKAB1-207ENST00000542698 SPTLC2O15270 562 aa9.5□□□□□ -0.89
PRKAB1-207ENST00000542698 ERLIN1O75477 346 aa9.5□□□□□ -0.89
PRKAB1-207ENST00000542698 NAP1L1P55209 391 aaKnown RBP9.5□□□□□ -0.89
PRKAB1-207ENST00000542698 UBASH3AP57075 661 aa9.5□□□□□ -0.89
PRKAB1-207ENST00000542698 BEND3Q5T5X7 828 aa9.5□□□□□ -0.89
PRKAB1-207ENST00000542698 SUCLG2Q96I99 432 aa9.5□□□□□ -0.89
PRKAB1-207ENST00000542698 AK7Q96M32 723 aa9.5□□□□□ -0.89
PRKAB1-207ENST00000542698 MAGEC2Q9UBF1 373 aaPredicted RBP9.5□□□□□ -0.89
PRKAB1-207ENST00000542698 METAP2P50579 478 aaKnown RBP eCLIP9.5□□□□□ -0.89
PRKAB1-207ENST00000542698 MAP3K12Q12852 859 aa9.5□□□□□ -0.89
PRKAB1-207ENST00000542698 CAGE1Q8TC20 777 aa9.5□□□□□ -0.89
PRKAB1-207ENST00000542698 ABCF2Q9UG63 623 aa9.5□□□□□ -0.89
PRKAB1-207ENST00000542698 GOLGA8AA7E2F4 631 aa9.5□□□□□ -0.89
PRKAB1-207ENST00000542698 RIOK3O14730 519 aaKnown RBP9.5□□□□□ -0.89
PRKAB1-207ENST00000542698 LMOD1P29536 600 aaPredicted RBP9.5□□□□□ -0.89
PRKAB1-207ENST00000542698 ATL3Q6DD88 541 aa9.5□□□□□ -0.89
PRKAB1-207ENST00000542698 EAF2Q96CJ1 260 aaPredicted RBP9.5□□□□□ -0.89
PRKAB1-207ENST00000542698 ZNHIT6Q9NWK9 470 aaKnown RBP9.5□□□□□ -0.89
PRKAB1-207ENST00000542698 TIMM10P62072 90 aa9.49□□□□□ -0.89
PRKAB1-207ENST00000542698 BMS1Q14692 1282 aaKnown RBP9.49□□□□□ -0.89
PRKAB1-207ENST00000542698 CCDC144CPQ8IYA2 1237 aa9.49□□□□□ -0.89
PRKAB1-207ENST00000542698 LSG1Q9H089 658 aaKnown RBP9.49□□□□□ -0.89
PRKAB1-207ENST00000542698 CLSTN2Q9H4D0 955 aa9.49□□□□□ -0.89
PRKAB1-207ENST00000542698 KCNQ3O43525 872 aa9.49□□□□□ -0.89
PRKAB1-207ENST00000542698 MARCKSP29966 332 aaPredicted RBP9.49□□□□□ -0.89
PRKAB1-207ENST00000542698 SSRP1Q08945 709 aaKnown RBP9.49□□□□□ -0.89
PRKAB1-207ENST00000542698 CHRNA2Q15822 529 aa9.49□□□□□ -0.89
PRKAB1-207ENST00000542698 ZNF790Q6PG37 636 aa9.49□□□□□ -0.89
PRKAB1-207ENST00000542698 CCDC129Q6ZRS4 1044 aa9.49□□□□□ -0.89
PRKAB1-207ENST00000542698 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.49□□□□□ -0.89
PRKAB1-207ENST00000542698 DBNDD2Q9BQY9 259 aa9.49□□□□□ -0.89
PRKAB1-207ENST00000542698 DEPDC5O75140 1603 aa9.49□□□□□ -0.89
PRKAB1-207ENST00000542698 MINDY4BA8MYZ0 360 aa9.49□□□□□ -0.89
PRKAB1-207ENST00000542698 LIG1P18858 919 aa9.49□□□□□ -0.89
PRKAB1-207ENST00000542698 ADCK5Q3MIX3 580 aa9.49□□□□□ -0.89
PRKAB1-207ENST00000542698 TMEM67Q5HYA8 995 aa9.49□□□□□ -0.89
PRKAB1-207ENST00000542698 TAF3Q5VWG9 929 aa9.49□□□□□ -0.89
PRKAB1-207ENST00000542698 LEKR1Q6ZMV7 388 aa9.49□□□□□ -0.89
PRKAB1-207ENST00000542698 KRT222Q8N1A0 295 aa9.49□□□□□ -0.89
PRKAB1-207ENST00000542698 RUFY1Q96T51 708 aa9.49□□□□□ -0.89
PRKAB1-207ENST00000542698 ALG1Q9BT22 464 aa9.49□□□□□ -0.89
PRKAB1-207ENST00000542698 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.49□□□□□ -0.89
PRKAB1-207ENST00000542698 TPCN1Q9ULQ1 816 aa9.49□□□□□ -0.89
PRKAB1-207ENST00000542698 V9GYY5 206 aaPredicted RBP9.49□□□□□ -0.89
PRKAB1-207ENST00000542698 CEP152O94986 1710 aa9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 ANKRD18BA2A2Z9 1011 aa9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 EIF3JO75822 258 aaKnown RBP9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 SLU7O95391 586 aaKnown RBP9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 LTKP29376 864 aa9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 CASQ1P31415 396 aa9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 FAM160A1Q05DH4 1040 aa9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 STIM1Q13586 685 aa9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 TNNI3KQ59H18 835 aa9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 TTC6Q86TZ1 520 aa9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 TSC1Q92574 1164 aa9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 LLPHQ9BRT6 129 aaKnown RBP9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 TMOD3Q9NYL9 352 aa9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 RAI14Q9P0K7 980 aa9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 FPGT-TNNI3KV9GXZ4 949 aa9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 INO80Q9ULG1 1556 aaPredicted RBP9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 IQGAP1P46940 1657 aa9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 PRC1O43663 620 aa9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 JAK2O60674 1132 aa9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 GPTP24298 496 aa9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 ZNF75DP51815 510 aa9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 TTF1Q15361 905 aaPredicted RBP9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 ILDR2Q71H61 639 aa9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 METTL22Q9BUU2 404 aaPredicted RBP9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 TRMT112Q9UI30 125 aaKnown RBP9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 DNAI1Q9UI46 699 aa9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 PRR36Q9H6K5 1346 aa9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 TMEM2Q9UHN6 1383 aa9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 A0A1B0GVL5 298 aa9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 G3V3G9 751 aa9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 RNF113AO15541 343 aaKnown RBP9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 GIGYF1O75420 1035 aaPredicted RBP9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 CPSF1Q10570 1443 aaKnown RBP9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 NOM1Q5C9Z4 860 aaKnown RBP9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 DCAF8Q5TAQ9 597 aa9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 CPLX3Q8WVH0 158 aa9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 EDC3Q96F86 508 aaKnown RBP9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 FEZ1Q99689 392 aa9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 TMX4Q9H1E5 349 aaPredicted RBP9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 ZDHHC9Q9Y397 364 aa9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 CDK12Q9NYV4 1490 aaPredicted RBP9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 VWDEQ8N2E2 1590 aa9.48□□□□□ -0.89
PRKAB1-207ENST00000542698 GNG11P61952 73 aa9.47□□□□□ -0.89
PRKAB1-207ENST00000542698 GCKRQ14397 625 aa9.47□□□□□ -0.89
PRKAB1-207ENST00000542698 KIF4BQ2VIQ3 1234 aa9.47□□□□□ -0.89
PRKAB1-207ENST00000542698 IGSF1Q8N6C5 1336 aa9.47□□□□□ -0.89
PRKAB1-207ENST00000542698 KIF5CO60282 957 aa9.47□□□□□ -0.89
PRKAB1-207ENST00000542698 SMAP1Q8IYB5 467 aaPredicted RBP9.47□□□□□ -0.89
PRKAB1-207ENST00000542698 SLC26A6Q9BXS9 759 aa9.47□□□□□ -0.89
PRKAB1-207ENST00000542698 IFNKQ9P0W0 207 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms