RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 LMNB1P20700 586 aa19.31■□□□□ 0.68
DDB1-218ENST00000540784 PODXL2Q9NZ53 605 aa19.31■□□□□ 0.68
DDB1-218ENST00000540784 GOLGB1Q14789 3259 aaKnown RBP19.31■□□□□ 0.68
DDB1-218ENST00000540784 PTPN12Q05209 780 aaKnown RBP19.3■□□□□ 0.68
DDB1-218ENST00000540784 CHRNDQ07001 517 aa19.3■□□□□ 0.68
DDB1-218ENST00000540784 CRBNQ96SW2 442 aa19.3■□□□□ 0.68
DDB1-218ENST00000540784 RTFDC1Q9BY42 306 aaPredicted RBP19.3■□□□□ 0.68
DDB1-218ENST00000540784 PUS3Q9BZE2 481 aaKnown RBP19.3■□□□□ 0.68
DDB1-218ENST00000540784 ZNF277Q9NRM2 450 aaPredicted RBP19.3■□□□□ 0.68
DDB1-218ENST00000540784 GGA1Q9UJY5 639 aa19.3■□□□□ 0.68
DDB1-218ENST00000540784 RIPOR2Q9Y4F9 1068 aa19.3■□□□□ 0.68
DDB1-218ENST00000540784 CACNA1SQ13698 1873 aa19.3■□□□□ 0.68
DDB1-218ENST00000540784 XDHP47989 1333 aa19.29■□□□□ 0.68
DDB1-218ENST00000540784 PNMA6EA0A0J9YXQ4 647 aa19.29■□□□□ 0.68
DDB1-218ENST00000540784 ATP2B4P23634 1241 aa19.29■□□□□ 0.68
DDB1-218ENST00000540784 C9orf131Q5VYM1 1079 aa19.29■□□□□ 0.68
DDB1-218ENST00000540784 RPAP2Q8IXW5 612 aaPredicted RBP19.29■□□□□ 0.68
DDB1-218ENST00000540784 TBC1D16Q8TBP0 767 aa19.29■□□□□ 0.68
DDB1-218ENST00000540784 VPS33BQ9H267 617 aa19.29■□□□□ 0.68
DDB1-218ENST00000540784 COPRSQ9NQ92 184 aa19.29■□□□□ 0.68
DDB1-218ENST00000540784 POLLQ9UGP5 575 aa19.29■□□□□ 0.68
DDB1-218ENST00000540784 COL4A1P02462 1669 aa19.29■□□□□ 0.68
DDB1-218ENST00000540784 EYA2O00167 538 aa19.28■□□□□ 0.68
DDB1-218ENST00000540784 IARSP41252 1262 aaKnown RBP19.28■□□□□ 0.68
DDB1-218ENST00000540784 PRELPP51888 382 aa19.28■□□□□ 0.68
DDB1-218ENST00000540784 LRRC24Q50LG9 513 aa19.28■□□□□ 0.68
DDB1-218ENST00000540784 HELBQ8NG08 1087 aaPredicted RBP19.28■□□□□ 0.68
DDB1-218ENST00000540784 EYA3Q99504 573 aa19.28■□□□□ 0.68
DDB1-218ENST00000540784 RNF181Q9P0P0 153 aa19.28■□□□□ 0.68
DDB1-218ENST00000540784 FBXO3Q9UK99 471 aa19.28■□□□□ 0.68
DDB1-218ENST00000540784 LEMD3Q9Y2U8 911 aa19.28■□□□□ 0.68
DDB1-218ENST00000540784 MROH5Q6ZUA9 1318 aa19.27■□□□□ 0.68
DDB1-218ENST00000540784 UFL1O94874 794 aa19.27■□□□□ 0.68
DDB1-218ENST00000540784 CENPBP07199 599 aaPredicted RBP19.27■□□□□ 0.68
DDB1-218ENST00000540784 WASHC4Q2M389 1173 aa19.27■□□□□ 0.68
DDB1-218ENST00000540784 CEP85Q6P2H3 762 aa19.27■□□□□ 0.68
DDB1-218ENST00000540784 SSH3Q8TE77 659 aa19.27■□□□□ 0.68
DDB1-218ENST00000540784 ZC3H12CQ9C0D7 883 aaKnown RBP19.27■□□□□ 0.68
DDB1-218ENST00000540784 SIL1Q9H173 461 aa19.27■□□□□ 0.68
DDB1-218ENST00000540784 PA2G4Q9UQ80 394 aaKnown RBP19.27■□□□□ 0.68
DDB1-218ENST00000540784 SNED1Q8TER0 1413 aa19.26■□□□□ 0.67
DDB1-218ENST00000540784 TAF5LO75529 589 aa19.26■□□□□ 0.67
DDB1-218ENST00000540784 CIAO1O76071 339 aa19.26■□□□□ 0.67
DDB1-218ENST00000540784 KCNJ4P48050 445 aa19.26■□□□□ 0.67
DDB1-218ENST00000540784 POLA2Q14181 598 aa19.26■□□□□ 0.67
DDB1-218ENST00000540784 METTL24Q5JXM2 366 aa19.26■□□□□ 0.67
DDB1-218ENST00000540784 LARGE2Q8N3Y3 721 aa19.26■□□□□ 0.67
DDB1-218ENST00000540784 RIMBP2O15034 1052 aa19.25■□□□□ 0.67
DDB1-218ENST00000540784 PPIP5K2O43314 1243 aa19.25■□□□□ 0.67
DDB1-218ENST00000540784 G3BP1Q13283 466 aaKnown RBP eCLIP19.25■□□□□ 0.679e-9■■□□□ 13.9
DDB1-218ENST00000540784 JDP2Q8WYK2 163 aa19.25■□□□□ 0.67
DDB1-218ENST00000540784 ZNF804BA4D1E1 1349 aa19.25■□□□□ 0.67
DDB1-218ENST00000540784 WTIPA6NIX2 430 aaPredicted RBP19.24■□□□□ 0.67
DDB1-218ENST00000540784 HMMRO75330 724 aa19.24■□□□□ 0.67
DDB1-218ENST00000540784 IL15P40933 162 aaPredicted RBP19.24■□□□□ 0.67
DDB1-218ENST00000540784 AOC3Q16853 763 aa19.24■□□□□ 0.67
DDB1-218ENST00000540784 ATG9AQ7Z3C6 839 aa19.24■□□□□ 0.67
DDB1-218ENST00000540784 FER1L6Q2WGJ9 1857 aa19.23■□□□□ 0.67
DDB1-218ENST00000540784 G3V3G9 751 aa19.23■□□□□ 0.67
DDB1-218ENST00000540784 SURF6O75683 361 aaKnown RBP19.23■□□□□ 0.67
DDB1-218ENST00000540784 KIAA2012Q0VF49 1180 aa19.23■□□□□ 0.67
DDB1-218ENST00000540784 AAMPQ13685 434 aa19.23■□□□□ 0.67
DDB1-218ENST00000540784 DCAF8Q5TAQ9 597 aa19.23■□□□□ 0.67
DDB1-218ENST00000540784 GPR101Q96P66 508 aaPredicted RBP19.23■□□□□ 0.67
DDB1-218ENST00000540784 CEP126Q9P2H0 1117 aa19.23■□□□□ 0.67
DDB1-218ENST00000540784 PDE8BO95263 885 aa19.22■□□□□ 0.67
DDB1-218ENST00000540784 SNAP23O00161 211 aa19.21■□□□□ 0.67
DDB1-218ENST00000540784 OS9Q13438 667 aaPredicted RBP19.21■□□□□ 0.67
DDB1-218ENST00000540784 UBE4AQ14139 1066 aa19.21■□□□□ 0.67
DDB1-218ENST00000540784 SIRT2Q8IXJ6 389 aa19.21■□□□□ 0.67
DDB1-218ENST00000540784 NIM1KQ8IY84 436 aa19.21■□□□□ 0.67
DDB1-218ENST00000540784 EXOC6Q8TAG9 804 aa19.21■□□□□ 0.67
DDB1-218ENST00000540784 NOP58Q9Y2X3 529 aaKnown RBP19.21■□□□□ 0.67
DDB1-218ENST00000540784 UTRNP46939 3433 aa19.21■□□□□ 0.67
DDB1-218ENST00000540784 IRX6P78412 446 aaPredicted RBP19.2■□□□□ 0.66
DDB1-218ENST00000540784 DOK7Q18PE1 504 aa19.2■□□□□ 0.66
DDB1-218ENST00000540784 LRRC37AA6NMS7 1700 aa19.2■□□□□ 0.66
DDB1-218ENST00000540784 YY1P25490 414 aa19.19■□□□□ 0.66
DDB1-218ENST00000540784 VGLL2Q8N8G2 317 aa19.19■□□□□ 0.66
DDB1-218ENST00000540784 ZNRF3Q9ULT6 936 aa19.19■□□□□ 0.66
DDB1-218ENST00000540784 PCDHB15Q9Y5E8 787 aa19.19■□□□□ 0.66
DDB1-218ENST00000540784 FZD9O00144 591 aa19.18■□□□□ 0.66
DDB1-218ENST00000540784 EIF6P56537 245 aaKnown RBP19.18■□□□□ 0.66
DDB1-218ENST00000540784 TFCP2Q12800 502 aa19.18■□□□□ 0.66
DDB1-218ENST00000540784 PUM3Q15397 648 aaKnown RBP19.18■□□□□ 0.66
DDB1-218ENST00000540784 HSP90AB4PQ58FF6 505 aa19.18■□□□□ 0.66
DDB1-218ENST00000540784 DPY19L2Q6NUT2 758 aa19.18■□□□□ 0.66
DDB1-218ENST00000540784 C15orf52Q6ZUT6 534 aaKnown RBP19.18■□□□□ 0.66
DDB1-218ENST00000540784 ZC3H4Q9UPT8 1303 aaKnown RBP19.18■□□□□ 0.66
DDB1-218ENST00000540784 SPEF2Q9C093 1822 aa19.18■□□□□ 0.66
DDB1-218ENST00000540784 IFIT1P09914 478 aaKnown RBP19.17■□□□□ 0.66
DDB1-218ENST00000540784 TXNRD3Q86VQ6 643 aa19.17■□□□□ 0.66
DDB1-218ENST00000540784 DBNDD1Q9H9R9 158 aa19.17■□□□□ 0.66
DDB1-218ENST00000540784 AKAP2Q9Y2D5 859 aa19.17■□□□□ 0.66
DDB1-218ENST00000540784 MED23Q9ULK4 1368 aa19.17■□□□□ 0.66
DDB1-218ENST00000540784 SASH1O94885 1247 aa19.16■□□□□ 0.66
DDB1-218ENST00000540784 KLRK1P26718 216 aa19.16■□□□□ 0.66
DDB1-218ENST00000540784 LPIN2Q92539 896 aa19.16■□□□□ 0.66
DDB1-218ENST00000540784 COA1Q9GZY4 146 aa19.16■□□□□ 0.66
DDB1-218ENST00000540784 SBF1O95248 1867 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 640.1 ms