RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 MPNDQ8N594 471 aa24.31■■□□□ 1.48
DDX55-207ENST00000540763 SUPT20HQ8NEM7 779 aa24.31■■□□□ 1.48
DDX55-207ENST00000540763 MPHOSPH8Q99549 860 aa24.31■■□□□ 1.48
DDX55-207ENST00000540763 VPS33BQ9H267 617 aa24.31■■□□□ 1.48
DDX55-207ENST00000540763 PODXL2Q9NZ53 605 aa24.31■■□□□ 1.48
DDX55-207ENST00000540763 ZC3H4Q9UPT8 1303 aaKnown RBP24.3■■□□□ 1.48
DDX55-207ENST00000540763 HSPA6P17066 643 aa24.29■■□□□ 1.48
DDX55-207ENST00000540763 TAF7LQ5H9L4 462 aa24.29■■□□□ 1.48
DDX55-207ENST00000540763 DPP8Q6V1X1 898 aaPredicted RBP24.29■■□□□ 1.48
DDX55-207ENST00000540763 SLC51AQ86UW1 340 aa24.28■■□□□ 1.48
DDX55-207ENST00000540763 MINPP1Q9UNW1 487 aa24.28■■□□□ 1.48
DDX55-207ENST00000540763 COG6Q9Y2V7 657 aa24.28■■□□□ 1.48
DDX55-207ENST00000540763 XDHP47989 1333 aa24.28■■□□□ 1.48
DDX55-207ENST00000540763 KIF3CO14782 793 aa24.26■■□□□ 1.47
DDX55-207ENST00000540763 RFX5P48382 616 aaPredicted RBP24.26■■□□□ 1.47
DDX55-207ENST00000540763 PRELPP51888 382 aa24.26■■□□□ 1.47
DDX55-207ENST00000540763 GPSM2P81274 684 aa24.26■■□□□ 1.47
DDX55-207ENST00000540763 C20orf194Q5TEA3 1177 aa24.26■■□□□ 1.47
DDX55-207ENST00000540763 LDHAL6AQ6ZMR3 332 aa24.26■■□□□ 1.47
DDX55-207ENST00000540763 ANKRD2Q9GZV1 360 aa24.26■■□□□ 1.47
DDX55-207ENST00000540763 RNF181Q9P0P0 153 aa24.26■■□□□ 1.47
DDX55-207ENST00000540763 FBXO3Q9UK99 471 aa24.26■■□□□ 1.47
DDX55-207ENST00000540763 NSFL1CQ9UNZ2 370 aaKnown RBP24.26■■□□□ 1.47
DDX55-207ENST00000540763 IARSP41252 1262 aaKnown RBP24.25■■□□□ 1.47
DDX55-207ENST00000540763 C9orf131Q5VYM1 1079 aa24.25■■□□□ 1.47
DDX55-207ENST00000540763 ZNF594Q96JF6 807 aaPredicted RBP24.24■■□□□ 1.47
DDX55-207ENST00000540763 ANKIB1Q9P2G1 1089 aa24.24■■□□□ 1.47
DDX55-207ENST00000540763 ATP2B4P23634 1241 aa24.23■■□□□ 1.47
DDX55-207ENST00000540763 PTPN12Q05209 780 aaKnown RBP24.23■■□□□ 1.47
DDX55-207ENST00000540763 EYA3Q99504 573 aa24.23■■□□□ 1.47
DDX55-207ENST00000540763 ZNF277Q9NRM2 450 aaPredicted RBP24.23■■□□□ 1.47
DDX55-207ENST00000540763 CNNM1Q9NRU3 951 aa24.23■■□□□ 1.47
DDX55-207ENST00000540763 ZBTB40Q9NUA8 1239 aa24.23■■□□□ 1.47
DDX55-207ENST00000540763 GGA1Q9UJY5 639 aa24.23■■□□□ 1.47
DDX55-207ENST00000540763 SRGAP3O43295 1099 aa24.22■■□□□ 1.47
DDX55-207ENST00000540763 CHRNDQ07001 517 aa24.22■■□□□ 1.47
DDX55-207ENST00000540763 TBC1D16Q8TBP0 767 aa24.22■■□□□ 1.47
DDX55-207ENST00000540763 LEMD3Q9Y2U8 911 aa24.22■■□□□ 1.47
DDX55-207ENST00000540763 MROH5Q6ZUA9 1318 aa24.21■■□□□ 1.47
DDX55-207ENST00000540763 KIAA2012Q0VF49 1180 aa24.21■■□□□ 1.47
DDX55-207ENST00000540763 COPRSQ9NQ92 184 aa24.21■■□□□ 1.47
DDX55-207ENST00000540763 POLLQ9UGP5 575 aa24.21■■□□□ 1.47
DDX55-207ENST00000540763 RIPOR2Q9Y4F9 1068 aa24.21■■□□□ 1.47
DDX55-207ENST00000540763 PSME4Q14997 1843 aa24.21■■□□□ 1.47
DDX55-207ENST00000540763 COL4A5P29400 1685 aa24.21■■□□□ 1.47
DDX55-207ENST00000540763 CIAO1O76071 339 aa24.2■■□□□ 1.46
DDX55-207ENST00000540763 UFL1O94874 794 aa24.2■■□□□ 1.46
DDX55-207ENST00000540763 MED23Q9ULK4 1368 aa24.19■■□□□ 1.46
DDX55-207ENST00000540763 EYA2O00167 538 aa24.19■■□□□ 1.46
DDX55-207ENST00000540763 PPIP5K2O43314 1243 aa24.19■■□□□ 1.46
DDX55-207ENST00000540763 ATP8B2P98198 1209 aa24.19■■□□□ 1.46
DDX55-207ENST00000540763 PNMA6EA0A0J9YXQ4 647 aa24.18■■□□□ 1.46
DDX55-207ENST00000540763 C6orf229H3BNL8 230 aa24.18■■□□□ 1.46
DDX55-207ENST00000540763 POLA2Q14181 598 aa24.18■■□□□ 1.46
DDX55-207ENST00000540763 WASHC4Q2M389 1173 aa24.18■■□□□ 1.46
DDX55-207ENST00000540763 LARGE2Q8N3Y3 721 aa24.18■■□□□ 1.46
DDX55-207ENST00000540763 KLHDC4Q8TBB5 520 aa24.18■■□□□ 1.46
DDX55-207ENST00000540763 SSH3Q8TE77 659 aa24.18■■□□□ 1.46
DDX55-207ENST00000540763 JDP2Q8WYK2 163 aa24.18■■□□□ 1.46
DDX55-207ENST00000540763 PUS3Q9BZE2 481 aaKnown RBP24.18■■□□□ 1.46
DDX55-207ENST00000540763 C1orf115Q9H7X2 142 aa24.18■■□□□ 1.46
DDX55-207ENST00000540763 AOC3Q16853 763 aa24.17■■□□□ 1.46
DDX55-207ENST00000540763 CEP85Q6P2H3 762 aa24.17■■□□□ 1.46
DDX55-207ENST00000540763 ZNF804BA4D1E1 1349 aa24.16■■□□□ 1.46
DDX55-207ENST00000540763 ARAP2Q8WZ64 1704 aa24.16■■□□□ 1.46
DDX55-207ENST00000540763 TOMM70O94826 608 aa24.16■■□□□ 1.46
DDX55-207ENST00000540763 LRRC24Q50LG9 513 aa24.16■■□□□ 1.46
DDX55-207ENST00000540763 RPAP2Q8IXW5 612 aaPredicted RBP24.16■■□□□ 1.46
DDX55-207ENST00000540763 NIM1KQ8IY84 436 aa24.16■■□□□ 1.46
DDX55-207ENST00000540763 FZD9O00144 591 aa24.15■■□□□ 1.46
DDX55-207ENST00000540763 IL15P40933 162 aaPredicted RBP24.15■■□□□ 1.46
DDX55-207ENST00000540763 C15orf52Q6ZUT6 534 aaKnown RBP24.15■■□□□ 1.46
DDX55-207ENST00000540763 VGLL2Q8N8G2 317 aa24.15■■□□□ 1.46
DDX55-207ENST00000540763 ZC3H12CQ9C0D7 883 aaKnown RBP24.15■■□□□ 1.46
DDX55-207ENST00000540763 SUPT16HQ9Y5B9 1047 aaKnown RBP24.15■■□□□ 1.46
DDX55-207ENST00000540763 UBE4AQ14139 1066 aa24.14■■□□□ 1.45
DDX55-207ENST00000540763 METTL24Q5JXM2 366 aa24.14■■□□□ 1.45
DDX55-207ENST00000540763 ATG9AQ7Z3C6 839 aa24.14■■□□□ 1.45
DDX55-207ENST00000540763 NMRK2Q9NPI5 230 aa24.14■■□□□ 1.45
DDX55-207ENST00000540763 WDR90Q96KV7 1748 aa24.13■■□□□ 1.45
DDX55-207ENST00000540763 PDE8BO95263 885 aa24.13■■□□□ 1.45
DDX55-207ENST00000540763 KCNJ4P48050 445 aa24.13■■□□□ 1.45
DDX55-207ENST00000540763 AAMPQ13685 434 aa24.13■■□□□ 1.45
DDX55-207ENST00000540763 PA2G4Q9UQ80 394 aaKnown RBP24.13■■□□□ 1.45
DDX55-207ENST00000540763 IRS2Q9Y4H2 1338 aa24.12■■□□□ 1.45
DDX55-207ENST00000540763 TAF5LO75529 589 aa24.12■■□□□ 1.45
DDX55-207ENST00000540763 APLP1P51693 650 aa24.12■■□□□ 1.45
DDX55-207ENST00000540763 IFFO2Q5TF58 517 aa24.12■■□□□ 1.45
DDX55-207ENST00000540763 HELBQ8NG08 1087 aaPredicted RBP24.12■■□□□ 1.45
DDX55-207ENST00000540763 ZNRF3Q9ULT6 936 aa24.12■■□□□ 1.45
DDX55-207ENST00000540763 SCN9AQ15858 1988 aa24.12■■□□□ 1.45
DDX55-207ENST00000540763 ZNF646O15015 1829 aaPredicted RBP24.12■■□□□ 1.45
DDX55-207ENST00000540763 HMMRO75330 724 aa24.11■■□□□ 1.45
DDX55-207ENST00000540763 SIL1Q9H173 461 aa24.11■■□□□ 1.45
DDX55-207ENST00000540763 NOP58Q9Y2X3 529 aaKnown RBP24.11■■□□□ 1.45
DDX55-207ENST00000540763 GLTPD2A6NH11 291 aa24.1■■□□□ 1.45
DDX55-207ENST00000540763 DPY19L2Q6NUT2 758 aa24.1■■□□□ 1.45
DDX55-207ENST00000540763 CRBNQ96SW2 442 aa24.1■■□□□ 1.45
DDX55-207ENST00000540763 SCN4AP35499 1836 aa24.1■■□□□ 1.45
DDX55-207ENST00000540763 RIMBP2O15034 1052 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms