RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 BCL2L13Q9BXK5 485 aa26.76■■□□□ 1.87
CHFR-217ENST00000540537 DBNDD1Q9H9R9 158 aa26.76■■□□□ 1.87
CHFR-217ENST00000540537 UFL1O94874 794 aa26.75■■□□□ 1.87
CHFR-217ENST00000540537 PLA2G12BQ9BX93 195 aa26.75■■□□□ 1.87
CHFR-217ENST00000540537 GGA1Q9UJY5 639 aa26.75■■□□□ 1.87
CHFR-217ENST00000540537 ZC3H12CQ9C0D7 883 aaKnown RBP26.74■■□□□ 1.87
CHFR-217ENST00000540537 GREM2Q9H772 168 aa26.74■■□□□ 1.87
CHFR-217ENST00000540537 XDHP47989 1333 aa26.73■■□□□ 1.87
CHFR-217ENST00000540537 ECE2O60344 883 aa26.73■■□□□ 1.87
CHFR-217ENST00000540537 GPR101Q96P66 508 aaPredicted RBP26.73■■□□□ 1.87
CHFR-217ENST00000540537 CNTNAP1P78357 1384 aa26.72■■□□□ 1.87
CHFR-217ENST00000540537 PSMD14O00487 310 aa26.72■■□□□ 1.87
CHFR-217ENST00000540537 CASP7P55210 303 aa26.72■■□□□ 1.87
CHFR-217ENST00000540537 MKRN1Q9UHC7 482 aaKnown RBP26.72■■□□□ 1.87
CHFR-217ENST00000540537 DOK7Q18PE1 504 aa26.71■■□□□ 1.87
CHFR-217ENST00000540537 DPF2Q92785 391 aa26.71■■□□□ 1.87
CHFR-217ENST00000540537 BSDC1Q9NW68 430 aaPredicted RBP26.71■■□□□ 1.87
CHFR-217ENST00000540537 SPEF2Q9C093 1822 aa26.71■■□□□ 1.87
CHFR-217ENST00000540537 ATP2B4P23634 1241 aa26.7■■□□□ 1.86
CHFR-217ENST00000540537 CNOT7Q9UIV1 285 aaKnown RBP26.7■■□□□ 1.86
CHFR-217ENST00000540537 SCN9AQ15858 1988 aa26.69■■□□□ 1.86
CHFR-217ENST00000540537 RPS12P25398 132 aaKnown RBP26.69■■□□□ 1.86
CHFR-217ENST00000540537 BEND3Q5T5X7 828 aa26.69■■□□□ 1.86
CHFR-217ENST00000540537 TRPM7Q96QT4 1865 aa26.68■■□□□ 1.86
CHFR-217ENST00000540537 F6X3S4 739 aa26.68■■□□□ 1.86
CHFR-217ENST00000540537 H7C1D1 291 aa26.68■■□□□ 1.86
CHFR-217ENST00000540537 MICALL2Q8IY33 904 aa26.68■■□□□ 1.86
CHFR-217ENST00000540537 ZC3H15Q8WU90 426 aaKnown RBP26.68■■□□□ 1.86
CHFR-217ENST00000540537 PGAP2Q9UHJ9 254 aa26.68■■□□□ 1.86
CHFR-217ENST00000540537 MINPP1Q9UNW1 487 aa26.68■■□□□ 1.86
CHFR-217ENST00000540537 ZBTB12Q9Y330 459 aaPredicted RBP26.68■■□□□ 1.86
CHFR-217ENST00000540537 G3V3G9 751 aa26.67■■□□□ 1.86
CHFR-217ENST00000540537 CSF1RP07333 972 aa26.67■■□□□ 1.86
CHFR-217ENST00000540537 IGHMBP2P38935 993 aaKnown RBP26.67■■□□□ 1.86
CHFR-217ENST00000540537 DCAF8Q5TAQ9 597 aa26.67■■□□□ 1.86
CHFR-217ENST00000540537 TRPM4Q8TD43 1214 aa26.67■■□□□ 1.86
CHFR-217ENST00000540537 KCNQ5Q9NR82 932 aa26.67■■□□□ 1.86
CHFR-217ENST00000540537 ITGA6P23229 1130 aa26.66■■□□□ 1.86
CHFR-217ENST00000540537 HIRAP54198 1017 aaPredicted RBP26.66■■□□□ 1.86
CHFR-217ENST00000540537 PSME4Q14997 1843 aa26.65■■□□□ 1.86
CHFR-217ENST00000540537 SHTN1A0MZ66 631 aa26.65■■□□□ 1.86
CHFR-217ENST00000540537 E9PSI1 815 aa26.65■■□□□ 1.86
CHFR-217ENST00000540537 VIL1P09327 827 aaKnown RBP26.65■■□□□ 1.86
CHFR-217ENST00000540537 FAM161AQ3B820 660 aa26.65■■□□□ 1.86
CHFR-217ENST00000540537 RASSF10A6NK89 507 aa26.64■■□□□ 1.86
CHFR-217ENST00000540537 HSPA1AP0DMV8 641 aaKnown RBP26.64■■□□□ 1.86
CHFR-217ENST00000540537 HSPA1BP0DMV9 641 aaKnown RBP26.64■■□□□ 1.86
CHFR-217ENST00000540537 MED23Q9ULK4 1368 aa26.63■■□□□ 1.85
CHFR-217ENST00000540537 TRAF5O00463 557 aa26.63■■□□□ 1.85
CHFR-217ENST00000540537 FMR1Q06787 632 aaKnown RBP eCLIP26.63■■□□□ 1.85
CHFR-217ENST00000540537 ZNF609O15014 1411 aa26.63■■□□□ 1.85
CHFR-217ENST00000540537 VEGFBP49765 207 aa26.62■■□□□ 1.85
CHFR-217ENST00000540537 CCT4P50991 539 aaKnown RBP26.62■■□□□ 1.85
CHFR-217ENST00000540537 DEFB115Q30KQ5 88 aa26.62■■□□□ 1.85
CHFR-217ENST00000540537 ABT1Q9ULW3 272 aaKnown RBP26.62■■□□□ 1.85
CHFR-217ENST00000540537 ALDH1L1O75891 902 aa26.61■■□□□ 1.85
CHFR-217ENST00000540537 IFFO2Q5TF58 517 aa26.61■■□□□ 1.85
CHFR-217ENST00000540537 PODNQ7Z5L7 613 aa26.61■■□□□ 1.85
CHFR-217ENST00000540537 MPHOSPH8Q99549 860 aa26.61■■□□□ 1.85
CHFR-217ENST00000540537 LEMD3Q9Y2U8 911 aa26.61■■□□□ 1.85
CHFR-217ENST00000540537 CCER2I3L3R5 266 aa26.6■■□□□ 1.85
CHFR-217ENST00000540537 GRM8O00222 908 aa26.6■■□□□ 1.85
CHFR-217ENST00000540537 FOXO4P98177 505 aa26.6■■□□□ 1.85
CHFR-217ENST00000540537 SAMD7Q7Z3H4 446 aa26.6■■□□□ 1.85
CHFR-217ENST00000540537 GLIS2Q9BZE0 524 aaPredicted RBP26.6■■□□□ 1.85
CHFR-217ENST00000540537 ANKRD2Q9GZV1 360 aa26.6■■□□□ 1.85
CHFR-217ENST00000540537 ANKRD18BA2A2Z9 1011 aa26.59■■□□□ 1.85
CHFR-217ENST00000540537 SLFN5Q08AF3 891 aa26.59■■□□□ 1.85
CHFR-217ENST00000540537 CST9Q5W186 159 aa26.59■■□□□ 1.85
CHFR-217ENST00000540537 CDC37L1Q7L3B6 337 aa26.59■■□□□ 1.85
CHFR-217ENST00000540537 AGBL3Q8NEM8 1001 aa26.59■■□□□ 1.85
CHFR-217ENST00000540537 WTIPA6NIX2 430 aaPredicted RBP26.58■■□□□ 1.85
CHFR-217ENST00000540537 TBC1D10BQ4KMP7 808 aaPredicted RBP26.58■■□□□ 1.85
CHFR-217ENST00000540537 RSBN1LQ6PCB5 846 aaPredicted RBP26.58■■□□□ 1.85
CHFR-217ENST00000540537 MRPL50Q8N5N7 158 aaKnown RBP26.58■■□□□ 1.85
CHFR-217ENST00000540537 SRCIN1Q9C0H9 1055 aa26.58■■□□□ 1.85
CHFR-217ENST00000540537 IFIT5Q13325 482 aaKnown RBP26.57■■□□□ 1.84
CHFR-217ENST00000540537 SLC4A10Q6U841 1118 aa26.57■■□□□ 1.84
CHFR-217ENST00000540537 C9orf78Q9NZ63 289 aaPredicted RBP26.57■■□□□ 1.84
CHFR-217ENST00000540537 USP17L3A6NCW0 530 aa26.56■■□□□ 1.84
CHFR-217ENST00000540537 USP17L4A6NCW7 530 aa26.56■■□□□ 1.84
CHFR-217ENST00000540537 CELF2O95319 508 aaKnown RBP26.56■■□□□ 1.84
CHFR-217ENST00000540537 EGFRP00533 1210 aa26.56■■□□□ 1.84
CHFR-217ENST00000540537 KIF4BQ2VIQ3 1234 aa26.56■■□□□ 1.84
CHFR-217ENST00000540537 USP17L1Q7RTZ2 530 aa26.56■■□□□ 1.84
CHFR-217ENST00000540537 TLL2Q9Y6L7 1015 aa26.56■■□□□ 1.84
CHFR-217ENST00000540537 ZNF804BA4D1E1 1349 aa26.56■■□□□ 1.84
CHFR-217ENST00000540537 COA1Q9GZY4 146 aa26.55■■□□□ 1.84
CHFR-217ENST00000540537 CHMP3Q9Y3E7 222 aa26.55■■□□□ 1.84
CHFR-217ENST00000540537 POLR2AP24928 1970 aaKnown RBP26.55■■□□□ 1.84
CHFR-217ENST00000540537 ZNF280AP59817 542 aaPredicted RBP26.54■■□□□ 1.84
CHFR-217ENST00000540537 CHRNDQ07001 517 aa26.54■■□□□ 1.84
CHFR-217ENST00000540537 EPHA10Q5JZY3 1008 aa26.54■■□□□ 1.84
CHFR-217ENST00000540537 RBM26Q5T8P6 1007 aaKnown RBP26.54■■□□□ 1.84
CHFR-217ENST00000540537 LMBR1LQ6UX01 489 aa26.54■■□□□ 1.84
CHFR-217ENST00000540537 GMLQ99445 158 aa26.54■■□□□ 1.84
CHFR-217ENST00000540537 PTPRCP08575 1304 aa26.54■■□□□ 1.84
CHFR-217ENST00000540537 WDR33Q9C0J8 1336 aaKnown RBP26.54■■□□□ 1.84
CHFR-217ENST00000540537 ECE1P42892 770 aa26.52■■□□□ 1.84
CHFR-217ENST00000540537 CCDC57Q2TAC2 916 aa26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms