RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 AOPEPQ8N6M6 819 aa16.35■□□□□ 0.21
SCNN1A-215ENST00000540037 DNAJC2Q99543 621 aaKnown RBP16.35■□□□□ 0.21
SCNN1A-215ENST00000540037 DIP2AQ14689 1571 aa16.35■□□□□ 0.21
SCNN1A-215ENST00000540037 IGKV5-2P06315 115 aa16.35■□□□□ 0.21
SCNN1A-215ENST00000540037 PLEKHG1Q9ULL1 1385 aa16.35■□□□□ 0.21
SCNN1A-215ENST00000540037 CTDNEP1O95476 244 aa16.35■□□□□ 0.21
SCNN1A-215ENST00000540037 FGD1P98174 961 aa16.35■□□□□ 0.21
SCNN1A-215ENST00000540037 STX1AQ16623 288 aa16.35■□□□□ 0.21
SCNN1A-215ENST00000540037 SARM1Q6SZW1 724 aa16.35■□□□□ 0.21
SCNN1A-215ENST00000540037 MRFAP1L1Q96HT8 127 aa16.35■□□□□ 0.21
SCNN1A-215ENST00000540037 ALDH8A1Q9H2A2 487 aaPredicted RBP16.35■□□□□ 0.21
SCNN1A-215ENST00000540037 DBNLQ9UJU6 430 aaKnown RBP16.35■□□□□ 0.21
SCNN1A-215ENST00000540037 NAP1L2Q9ULW6 460 aaPredicted RBP16.35■□□□□ 0.21
SCNN1A-215ENST00000540037 MARF1Q9Y4F3 1742 aaKnown RBP16.34■□□□□ 0.21
SCNN1A-215ENST00000540037 APOBRQ0VD83 1088 aa16.34■□□□□ 0.21
SCNN1A-215ENST00000540037 CHST3Q7LGC8 479 aa16.34■□□□□ 0.21
SCNN1A-215ENST00000540037 PIP4K2AP48426 406 aaPredicted RBP16.34■□□□□ 0.21
SCNN1A-215ENST00000540037 CCAR2Q8N163 923 aaKnown RBP16.34■□□□□ 0.21
SCNN1A-215ENST00000540037 LINS1Q8NG48 757 aa16.34■□□□□ 0.21
SCNN1A-215ENST00000540037 CFAP45Q9UL16 551 aa16.34■□□□□ 0.21
SCNN1A-215ENST00000540037 MYL6BP14649 208 aa16.33■□□□□ 0.21
SCNN1A-215ENST00000540037 TSGA10IPQ3SY00 556 aa16.33■□□□□ 0.21
SCNN1A-215ENST00000540037 USPL1Q5W0Q7 1092 aa16.33■□□□□ 0.21
SCNN1A-215ENST00000540037 DDX46Q7L014 1031 aaKnown RBP16.33■□□□□ 0.21
SCNN1A-215ENST00000540037 HMG20BQ9P0W2 317 aa16.33■□□□□ 0.21
SCNN1A-215ENST00000540037 ZNF609O15014 1411 aa16.33■□□□□ 0.2
SCNN1A-215ENST00000540037 PDIA4P13667 645 aaKnown RBP16.33■□□□□ 0.2
SCNN1A-215ENST00000540037 NBPF11Q86T75 865 aa16.33■□□□□ 0.2
SCNN1A-215ENST00000540037 NSUN7Q8NE18 718 aaKnown RBP16.33■□□□□ 0.2
SCNN1A-215ENST00000540037 KDM3BQ7LBC6 1761 aa16.32■□□□□ 0.2
SCNN1A-215ENST00000540037 ZNF446Q9NWS9 450 aa16.32■□□□□ 0.2
SCNN1A-215ENST00000540037 MED1Q15648 1581 aaPredicted RBP16.32■□□□□ 0.2
SCNN1A-215ENST00000540037 PXDNQ92626 1479 aa16.32■□□□□ 0.2
SCNN1A-215ENST00000540037 ME1P48163 572 aa16.32■□□□□ 0.2
SCNN1A-215ENST00000540037 ILDR1Q86SU0 546 aaPredicted RBP16.32■□□□□ 0.2
SCNN1A-215ENST00000540037 ZNF397Q8NF99 534 aaPredicted RBP16.32■□□□□ 0.2
SCNN1A-215ENST00000540037 JCADQ9P266 1359 aa16.32■□□□□ 0.2
SCNN1A-215ENST00000540037 PTPDC1A2A3K4 754 aa16.32■□□□□ 0.2
SCNN1A-215ENST00000540037 RNMTO43148 476 aaKnown RBP16.32■□□□□ 0.2
SCNN1A-215ENST00000540037 TFCP2Q12800 502 aa16.32■□□□□ 0.2
SCNN1A-215ENST00000540037 TERF2Q15554 542 aa16.32■□□□□ 0.2
SCNN1A-215ENST00000540037 FSIP1Q8NA03 581 aa16.32■□□□□ 0.2
SCNN1A-215ENST00000540037 ENGASEQ8NFI3 743 aa16.32■□□□□ 0.2
SCNN1A-215ENST00000540037 IP6K1Q92551 441 aa16.32■□□□□ 0.2
SCNN1A-215ENST00000540037 ZSCAN16Q9H4T2 348 aaPredicted RBP16.32■□□□□ 0.2
SCNN1A-215ENST00000540037 RCOR1Q9UKL0 485 aa16.32■□□□□ 0.2
SCNN1A-215ENST00000540037 A0A1B0GVL5 298 aa16.31■□□□□ 0.2
SCNN1A-215ENST00000540037 AKAP4Q5JQC9 854 aa16.31■□□□□ 0.2
SCNN1A-215ENST00000540037 OTUD7BQ6GQQ9 843 aa16.31■□□□□ 0.2
SCNN1A-215ENST00000540037 FMNL2Q96PY5 1086 aa16.31■□□□□ 0.2
SCNN1A-215ENST00000540037 KINO60870 393 aaKnown RBP16.31■□□□□ 0.2
SCNN1A-215ENST00000540037 SLC39A6Q13433 755 aa16.31■□□□□ 0.2
SCNN1A-215ENST00000540037 ERCC6LQ2NKX8 1250 aa16.31■□□□□ 0.2
SCNN1A-215ENST00000540037 CCDC73Q6ZRK6 1079 aa16.31■□□□□ 0.2
SCNN1A-215ENST00000540037 RIC3Q7Z5B4 369 aa16.31■□□□□ 0.2
SCNN1A-215ENST00000540037 KRT222Q8N1A0 295 aa16.31■□□□□ 0.2
SCNN1A-215ENST00000540037 RGPD2P0DJD1 1756 aa16.31■□□□□ 0.2
SCNN1A-215ENST00000540037 ERICH4A6NGS2 130 aa16.3■□□□□ 0.2
SCNN1A-215ENST00000540037 GABPB1Q06547 395 aaPredicted RBP16.3■□□□□ 0.2
SCNN1A-215ENST00000540037 PDIA6Q15084 440 aa16.3■□□□□ 0.2
SCNN1A-215ENST00000540037 E4F1Q66K89 784 aaPredicted RBP16.3■□□□□ 0.2
SCNN1A-215ENST00000540037 SMARCC2Q8TAQ2 1214 aa16.3■□□□□ 0.2
SCNN1A-215ENST00000540037 DBNDD2Q9BQY9 259 aa16.3■□□□□ 0.2
SCNN1A-215ENST00000540037 BIN1O00499 593 aa16.3■□□□□ 0.2
SCNN1A-215ENST00000540037 KCNA6P17658 529 aa16.29■□□□□ 0.2
SCNN1A-215ENST00000540037 DPCR1Q3MIW9 517 aa16.29■□□□□ 0.2
SCNN1A-215ENST00000540037 KRT32Q14532 448 aa16.29■□□□□ 0.2
SCNN1A-215ENST00000540037 EID1Q9Y6B2 187 aa16.29■□□□□ 0.2
SCNN1A-215ENST00000540037 CAVIN2O95810 425 aa16.29■□□□□ 0.2
SCNN1A-215ENST00000540037 FAM160A1Q05DH4 1040 aa16.29■□□□□ 0.2
SCNN1A-215ENST00000540037 PTPN21Q16825 1174 aa16.29■□□□□ 0.2
SCNN1A-215ENST00000540037 ISM2Q6H9L7 571 aa16.29■□□□□ 0.2
SCNN1A-215ENST00000540037 SYT10Q6XYQ8 523 aa16.29■□□□□ 0.2
SCNN1A-215ENST00000540037 MYD88Q99836 296 aa16.29■□□□□ 0.2
SCNN1A-215ENST00000540037 GPHNQ9NQX3 736 aaPredicted RBP16.29■□□□□ 0.2
SCNN1A-215ENST00000540037 PCDHA7Q9UN72 937 aa16.29■□□□□ 0.2
SCNN1A-215ENST00000540037 TNNI3KQ59H18 835 aa16.28■□□□□ 0.2
SCNN1A-215ENST00000540037 ARMCX5Q6P1M9 558 aa16.28■□□□□ 0.2
SCNN1A-215ENST00000540037 ERO1AQ96HE7 468 aa16.28■□□□□ 0.2
SCNN1A-215ENST00000540037 GJB4Q9NTQ9 266 aa16.28■□□□□ 0.2
SCNN1A-215ENST00000540037 ANO10Q9NW15 660 aa16.28■□□□□ 0.2
SCNN1A-215ENST00000540037 FPGT-TNNI3KV9GXZ4 949 aa16.28■□□□□ 0.2
SCNN1A-215ENST00000540037 UTYO14607 1347 aa16.28■□□□□ 0.2
SCNN1A-215ENST00000540037 PFKFB2O60825 505 aa16.28■□□□□ 0.2
SCNN1A-215ENST00000540037 SMC2O95347 1197 aa16.28■□□□□ 0.2
SCNN1A-215ENST00000540037 SLU7O95391 586 aaKnown RBP16.28■□□□□ 0.2
SCNN1A-215ENST00000540037 SDF4Q9BRK5 362 aa16.28■□□□□ 0.2
SCNN1A-215ENST00000540037 XPO4Q9C0E2 1151 aaKnown RBP16.28■□□□□ 0.2
SCNN1A-215ENST00000540037 LTN1O94822 1766 aa16.28■□□□□ 0.2
SCNN1A-215ENST00000540037 NEURL1BA8MQ27 555 aa16.27■□□□□ 0.2
SCNN1A-215ENST00000540037 NEMFO60524 1076 aa16.27■□□□□ 0.2
SCNN1A-215ENST00000540037 NDUFA8P51970 172 aa16.27■□□□□ 0.2
SCNN1A-215ENST00000540037 C1orf141Q5JVX7 400 aa16.27■□□□□ 0.2
SCNN1A-215ENST00000540037 GORABQ5T7V8 394 aa16.27■□□□□ 0.2
SCNN1A-215ENST00000540037 TMC6Q7Z403 805 aa16.27■□□□□ 0.2
SCNN1A-215ENST00000540037 CEP57L1Q8IYX8 460 aa16.27■□□□□ 0.2
SCNN1A-215ENST00000540037 IFNKQ9P0W0 207 aa16.27■□□□□ 0.2
SCNN1A-215ENST00000540037 TAOK2Q9UL54 1235 aa16.27■□□□□ 0.2
SCNN1A-215ENST00000540037 CTAGE5O15320 804 aa16.27■□□□□ 0.2
SCNN1A-215ENST00000540037 ATP5JP18859 108 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms