RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 UBE4AQ14139 1066 aa14.35□□□□□ -0.11
VTN-202ENST00000539746 ATP2B3Q16720 1220 aa14.35□□□□□ -0.11
VTN-202ENST00000539746 CRY2Q49AN0 593 aa14.35□□□□□ -0.11
VTN-202ENST00000539746 CC2D2BQ6DHV5 1058 aa14.35□□□□□ -0.11
VTN-202ENST00000539746 EVI5LQ96CN4 794 aa14.35□□□□□ -0.11
VTN-202ENST00000539746 ZNF512BQ96KM6 892 aaPredicted RBP14.35□□□□□ -0.11
VTN-202ENST00000539746 IL1RAPL2Q9NP60 686 aa14.35□□□□□ -0.11
VTN-202ENST00000539746 PA2G4Q9UQ80 394 aaKnown RBP14.35□□□□□ -0.11
VTN-202ENST00000539746 RFX7Q2KHR2 1363 aa14.34□□□□□ -0.11
VTN-202ENST00000539746 KLRG2A4D1S0 409 aaPredicted RBP14.34□□□□□ -0.11
VTN-202ENST00000539746 H0YIN7 160 aa14.34□□□□□ -0.11
VTN-202ENST00000539746 ATP5JP18859 108 aa14.34□□□□□ -0.11
VTN-202ENST00000539746 MFAP1P55081 439 aaKnown RBP14.34□□□□□ -0.11
VTN-202ENST00000539746 TFCP2Q12800 502 aa14.34□□□□□ -0.11
VTN-202ENST00000539746 SOGA3Q5TF21 947 aa14.34□□□□□ -0.11
VTN-202ENST00000539746 ZSCAN25Q6NSZ9 544 aa14.34□□□□□ -0.11
VTN-202ENST00000539746 JARID2Q92833 1246 aaPredicted RBP14.34□□□□□ -0.11
VTN-202ENST00000539746 CNKSR1Q969H4 720 aa14.34□□□□□ -0.11
VTN-202ENST00000539746 NEUROD6Q96NK8 337 aa14.34□□□□□ -0.11
VTN-202ENST00000539746 MTFR1LQ9H019 292 aa14.34□□□□□ -0.11
VTN-202ENST00000539746 RIPOR2Q9Y4F9 1068 aa14.34□□□□□ -0.11
VTN-202ENST00000539746 TRIM6-TRIM34B2RNG4 842 aa14.33□□□□□ -0.12
VTN-202ENST00000539746 SEMA3EO15041 775 aa14.33□□□□□ -0.12
VTN-202ENST00000539746 ZBTB22O15209 634 aa14.33□□□□□ -0.12
VTN-202ENST00000539746 SASH1O94885 1247 aa14.33□□□□□ -0.12
VTN-202ENST00000539746 STYK1Q6J9G0 422 aa14.33□□□□□ -0.12
VTN-202ENST00000539746 VPS37DQ86XT2 251 aa14.33□□□□□ -0.12
VTN-202ENST00000539746 MASTLQ96GX5 879 aa14.33□□□□□ -0.12
VTN-202ENST00000539746 LEMD3Q9Y2U8 911 aa14.33□□□□□ -0.12
VTN-202ENST00000539746 ZFYP08048 801 aaPredicted RBP14.32□□□□□ -0.12
VTN-202ENST00000539746 TTC39AQ5SRH9 613 aa14.32□□□□□ -0.12
VTN-202ENST00000539746 ATG9AQ7Z3C6 839 aa14.32□□□□□ -0.12
VTN-202ENST00000539746 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.32□□□□□ -0.12
VTN-202ENST00000539746 ZNF609O15014 1411 aa14.32□□□□□ -0.12
VTN-202ENST00000539746 LRP5O75197 1615 aa14.31□□□□□ -0.12
VTN-202ENST00000539746 A0A1B0GUL7 405 aa14.31□□□□□ -0.12
VTN-202ENST00000539746 SMARCA5O60264 1052 aaPredicted RBP14.31□□□□□ -0.12
VTN-202ENST00000539746 MCCP23508 829 aa14.31□□□□□ -0.12
VTN-202ENST00000539746 PDE4AP27815 886 aa14.31□□□□□ -0.12
VTN-202ENST00000539746 DEFB132Q7Z7B7 95 aa14.31□□□□□ -0.12
VTN-202ENST00000539746 UPF1Q92900 1129 aaKnown RBP eCLIP14.31□□□□□ -0.12
VTN-202ENST00000539746 BACH2Q9BYV9 841 aa14.31□□□□□ -0.12
VTN-202ENST00000539746 XDHP47989 1333 aa14.31□□□□□ -0.12
VTN-202ENST00000539746 ATP2B4P23634 1241 aa14.3□□□□□ -0.12
VTN-202ENST00000539746 ZGPATQ8N5A5 531 aaKnown RBP14.3□□□□□ -0.12
VTN-202ENST00000539746 SUPT20HQ8NEM7 779 aa14.3□□□□□ -0.12
VTN-202ENST00000539746 CCDC85AQ96PX6 553 aaPredicted RBP14.3□□□□□ -0.12
VTN-202ENST00000539746 EYA3Q99504 573 aa14.3□□□□□ -0.12
VTN-202ENST00000539746 DIAPH3Q9NSV4 1193 aa14.3□□□□□ -0.12
VTN-202ENST00000539746 ANKIB1Q9P2G1 1089 aa14.3□□□□□ -0.12
VTN-202ENST00000539746 RAD50Q92878 1312 aa14.3□□□□□ -0.12
VTN-202ENST00000539746 SALL3Q9BXA9 1300 aa14.3□□□□□ -0.12
VTN-202ENST00000539746 EP400Q96L91 3159 aa14.3□□□□□ -0.12
VTN-202ENST00000539746 CHRNDQ07001 517 aa14.29□□□□□ -0.12
VTN-202ENST00000539746 DDR1Q08345 913 aa14.29□□□□□ -0.12
VTN-202ENST00000539746 KIAA1211Q6ZU35 1233 aa14.29□□□□□ -0.12
VTN-202ENST00000539746 KLHDC4Q8TBB5 520 aa14.29□□□□□ -0.12
VTN-202ENST00000539746 RILPL2Q969X0 211 aa14.29□□□□□ -0.12
VTN-202ENST00000539746 EAF2Q96CJ1 260 aaPredicted RBP14.29□□□□□ -0.12
VTN-202ENST00000539746 ANO8Q9HCE9 1232 aaPredicted RBP14.29□□□□□ -0.12
VTN-202ENST00000539746 DDX60Q8IY21 1712 aaKnown RBP14.29□□□□□ -0.12
VTN-202ENST00000539746 TGFB2P61812 414 aa14.28□□□□□ -0.12
VTN-202ENST00000539746 PDS5AQ29RF7 1337 aaKnown RBP14.28□□□□□ -0.12
VTN-202ENST00000539746 LRRC24Q50LG9 513 aa14.28□□□□□ -0.12
VTN-202ENST00000539746 ZNF804AQ7Z570 1209 aa14.28□□□□□ -0.12
VTN-202ENST00000539746 AMIGO3Q86WK7 504 aa14.28□□□□□ -0.12
VTN-202ENST00000539746 CERS3Q8IU89 383 aa14.28□□□□□ -0.12
VTN-202ENST00000539746 SP8Q8IXZ3 490 aa14.28□□□□□ -0.12
VTN-202ENST00000539746 SYNE4Q8N205 404 aa14.28□□□□□ -0.12
VTN-202ENST00000539746 ZNF594Q96JF6 807 aaPredicted RBP14.28□□□□□ -0.12
VTN-202ENST00000539746 HAUS7Q99871 368 aa14.28□□□□□ -0.12
VTN-202ENST00000539746 BCL11AQ9H165 835 aa14.28□□□□□ -0.12
VTN-202ENST00000539746 PPEF1O14829 653 aaPredicted RBP14.27□□□□□ -0.13
VTN-202ENST00000539746 SRGNP10124 158 aa14.27□□□□□ -0.13
VTN-202ENST00000539746 SDSP20132 328 aa14.27□□□□□ -0.13
VTN-202ENST00000539746 ANP32AP39687 249 aaKnown RBP14.27□□□□□ -0.13
VTN-202ENST00000539746 XAGE2Q96GT9 111 aa14.27□□□□□ -0.13
VTN-202ENST00000539746 CCDC8Q9H0W5 538 aaPredicted RBP14.27□□□□□ -0.13
VTN-202ENST00000539746 PODXL2Q9NZ53 605 aa14.27□□□□□ -0.13
VTN-202ENST00000539746 DBNLQ9UJU6 430 aaKnown RBP14.27□□□□□ -0.13
VTN-202ENST00000539746 GGA1Q9UJY5 639 aa14.27□□□□□ -0.13
VTN-202ENST00000539746 DENND2AQ9ULE3 1009 aa14.27□□□□□ -0.13
VTN-202ENST00000539746 MINPP1Q9UNW1 487 aa14.27□□□□□ -0.13
VTN-202ENST00000539746 NRXN2Q9P2S2 1712 aa14.27□□□□□ -0.13
VTN-202ENST00000539746 FRAT2O75474 233 aaPredicted RBP14.26□□□□□ -0.13
VTN-202ENST00000539746 SPTY2D1Q68D10 685 aaPredicted RBP14.26□□□□□ -0.13
VTN-202ENST00000539746 C15orf52Q6ZUT6 534 aaKnown RBP14.26□□□□□ -0.13
VTN-202ENST00000539746 C2CD5Q86YS7 1000 aa14.26□□□□□ -0.13
VTN-202ENST00000539746 VGLL2Q8N8G2 317 aa14.26□□□□□ -0.13
VTN-202ENST00000539746 PI4K2BQ8TCG2 481 aa14.26□□□□□ -0.13
VTN-202ENST00000539746 FSD1Q9BTV5 496 aa14.26□□□□□ -0.13
VTN-202ENST00000539746 VPS33BQ9H267 617 aa14.26□□□□□ -0.13
VTN-202ENST00000539746 SEC31BQ9NQW1 1179 aa14.26□□□□□ -0.13
VTN-202ENST00000539746 ATP6V0A2Q9Y487 856 aa14.26□□□□□ -0.13
VTN-202ENST00000539746 SPEF2Q9C093 1822 aa14.26□□□□□ -0.13
VTN-202ENST00000539746 ZNF804BA4D1E1 1349 aa14.25□□□□□ -0.13
VTN-202ENST00000539746 FGFR2P21802 821 aa14.25□□□□□ -0.13
VTN-202ENST00000539746 C16orf71Q8IYS4 520 aaPredicted RBP14.25□□□□□ -0.13
VTN-202ENST00000539746 DDRGK1Q96HY6 314 aa14.25□□□□□ -0.13
VTN-202ENST00000539746 PAG1Q9NWQ8 432 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms