RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 DPY19L2Q6NUT2 758 aa13.53□□□□□ -0.24
HMGA2-209ENST00000539662 JDP2Q8WYK2 163 aa13.53□□□□□ -0.24
HMGA2-209ENST00000539662 CLUAP1Q96AJ1 413 aa13.53□□□□□ -0.24
HMGA2-209ENST00000539662 CDC5LQ99459 802 aaKnown RBP13.53□□□□□ -0.24
HMGA2-209ENST00000539662 DBNDD1Q9H9R9 158 aa13.53□□□□□ -0.24
HMGA2-209ENST00000539662 BSDC1Q9NW68 430 aaPredicted RBP13.53□□□□□ -0.24
HMGA2-209ENST00000539662 PODXL2Q9NZ53 605 aa13.53□□□□□ -0.24
HMGA2-209ENST00000539662 ANKIB1Q9P2G1 1089 aa13.53□□□□□ -0.24
HMGA2-209ENST00000539662 ANKRD18BA2A2Z9 1011 aa13.52□□□□□ -0.25
HMGA2-209ENST00000539662 UFL1O94874 794 aa13.52□□□□□ -0.25
HMGA2-209ENST00000539662 KLRK1P26718 216 aa13.52□□□□□ -0.25
HMGA2-209ENST00000539662 CXCL9Q07325 125 aa13.52□□□□□ -0.25
HMGA2-209ENST00000539662 WASHC4Q2M389 1173 aa13.52□□□□□ -0.25
HMGA2-209ENST00000539662 NIM1KQ8IY84 436 aa13.52□□□□□ -0.25
HMGA2-209ENST00000539662 SUPT20HQ8NEM7 779 aa13.52□□□□□ -0.25
HMGA2-209ENST00000539662 HELBQ8NG08 1087 aaPredicted RBP13.52□□□□□ -0.25
HMGA2-209ENST00000539662 PUS3Q9BZE2 481 aaKnown RBP13.52□□□□□ -0.25
HMGA2-209ENST00000539662 API5Q9BZZ5 524 aaKnown RBP13.52□□□□□ -0.25
HMGA2-209ENST00000539662 GJA3Q9Y6H8 435 aa13.52□□□□□ -0.25
HMGA2-209ENST00000539662 TAF5LO75529 589 aa13.51□□□□□ -0.25
HMGA2-209ENST00000539662 RAD17O75943 681 aa13.51□□□□□ -0.25
HMGA2-209ENST00000539662 VEGFAP15692 232 aaPredicted RBP13.51□□□□□ -0.25
HMGA2-209ENST00000539662 IGHMBP2P38935 993 aaKnown RBP13.51□□□□□ -0.25
HMGA2-209ENST00000539662 RABL6Q3YEC7 729 aaPredicted RBP13.51□□□□□ -0.25
HMGA2-209ENST00000539662 TXNRD3Q86VQ6 643 aa13.51□□□□□ -0.25
HMGA2-209ENST00000539662 KLHDC4Q8TBB5 520 aa13.51□□□□□ -0.25
HMGA2-209ENST00000539662 ARHGAP45Q92619 1136 aa13.51□□□□□ -0.25
HMGA2-209ENST00000539662 MEIS3Q99687 375 aa13.51□□□□□ -0.25
HMGA2-209ENST00000539662 GGA1Q9UJY5 639 aa13.51□□□□□ -0.25
HMGA2-209ENST00000539662 ZNRF3Q9ULT6 936 aa13.51□□□□□ -0.25
HMGA2-209ENST00000539662 XDHP47989 1333 aa13.5□□□□□ -0.25
HMGA2-209ENST00000539662 KIF16BQ96L93 1317 aa13.5□□□□□ -0.25
HMGA2-209ENST00000539662 SHTN1A0MZ66 631 aa13.5□□□□□ -0.25
HMGA2-209ENST00000539662 RLBP1P12271 317 aa13.5□□□□□ -0.25
HMGA2-209ENST00000539662 CCT4P50991 539 aaKnown RBP13.5□□□□□ -0.25
HMGA2-209ENST00000539662 EIF6P56537 245 aaKnown RBP13.5□□□□□ -0.25
HMGA2-209ENST00000539662 CHRNDQ07001 517 aa13.5□□□□□ -0.25
HMGA2-209ENST00000539662 IFIT5Q13325 482 aaKnown RBP13.5□□□□□ -0.25
HMGA2-209ENST00000539662 INTS3Q68E01 1043 aaKnown RBP13.5□□□□□ -0.25
HMGA2-209ENST00000539662 ATF7IPQ6VMQ6 1270 aa13.5□□□□□ -0.25
HMGA2-209ENST00000539662 L3MBTL3Q96JM7 780 aaPredicted RBP13.5□□□□□ -0.25
HMGA2-209ENST00000539662 VPS33BQ9H267 617 aa13.5□□□□□ -0.25
HMGA2-209ENST00000539662 ZNF646O15015 1829 aaPredicted RBP13.49□□□□□ -0.25
HMGA2-209ENST00000539662 SCN4AP35499 1836 aa13.49□□□□□ -0.25
HMGA2-209ENST00000539662 ECE2O60344 883 aa13.49□□□□□ -0.25
HMGA2-209ENST00000539662 TOMM70O94826 608 aa13.49□□□□□ -0.25
HMGA2-209ENST00000539662 SCNN1DP51172 638 aa13.49□□□□□ -0.25
HMGA2-209ENST00000539662 GPC2Q8N158 579 aa13.49□□□□□ -0.25
HMGA2-209ENST00000539662 TMEM57Q8N5G2 664 aa13.49□□□□□ -0.25
HMGA2-209ENST00000539662 MPHOSPH8Q99549 860 aa13.49□□□□□ -0.25
HMGA2-209ENST00000539662 LRRFIP2Q9Y608 721 aaKnown RBP13.49□□□□□ -0.25
HMGA2-209ENST00000539662 ATP2B4P23634 1241 aa13.48□□□□□ -0.25
HMGA2-209ENST00000539662 EPS15P42566 896 aa13.48□□□□□ -0.25
HMGA2-209ENST00000539662 RFX5P48382 616 aaPredicted RBP13.48□□□□□ -0.25
HMGA2-209ENST00000539662 CCDC57Q2TAC2 916 aa13.48□□□□□ -0.25
HMGA2-209ENST00000539662 LRRC24Q50LG9 513 aa13.48□□□□□ -0.25
HMGA2-209ENST00000539662 YTHDC1Q96MU7 727 aaKnown RBP13.48□□□□□ -0.25
HMGA2-209ENST00000539662 TAF1DQ9H5J8 278 aaPredicted RBP13.48□□□□□ -0.25
HMGA2-209ENST00000539662 ZBTB12Q9Y330 459 aaPredicted RBP13.48□□□□□ -0.25
HMGA2-209ENST00000539662 IRS2Q9Y4H2 1338 aa13.47□□□□□ -0.25
HMGA2-209ENST00000539662 PSMD14O00487 310 aa13.47□□□□□ -0.25
HMGA2-209ENST00000539662 PLIN1O60240 522 aa13.47□□□□□ -0.25
HMGA2-209ENST00000539662 GMPSP49915 693 aaPredicted RBP13.47□□□□□ -0.25
HMGA2-209ENST00000539662 ZKSCAN2Q63HK3 967 aa13.47□□□□□ -0.25
HMGA2-209ENST00000539662 CIAPIN1Q6FI81 312 aa13.47□□□□□ -0.25
HMGA2-209ENST00000539662 LDHAL6AQ6ZMR3 332 aa13.47□□□□□ -0.25
HMGA2-209ENST00000539662 EYA3Q99504 573 aa13.47□□□□□ -0.25
HMGA2-209ENST00000539662 ZC3H12CQ9C0D7 883 aaKnown RBP13.47□□□□□ -0.25
HMGA2-209ENST00000539662 ADAMTSL1Q8N6G6 1762 aa13.47□□□□□ -0.25
HMGA2-209ENST00000539662 ZNF804BA4D1E1 1349 aa13.46□□□□□ -0.25
HMGA2-209ENST00000539662 IPO8O15397 1037 aaKnown RBP13.46□□□□□ -0.25
HMGA2-209ENST00000539662 UBTFL1P0CB47 393 aaPredicted RBP13.46□□□□□ -0.25
HMGA2-209ENST00000539662 EPHX2P34913 555 aa13.46□□□□□ -0.25
HMGA2-209ENST00000539662 TAF7LQ5H9L4 462 aa13.46□□□□□ -0.25
HMGA2-209ENST00000539662 C16orf71Q8IYS4 520 aaPredicted RBP13.46□□□□□ -0.25
HMGA2-209ENST00000539662 RBM46Q8TBY0 533 aaKnown RBP13.46□□□□□ -0.25
HMGA2-209ENST00000539662 MXD3Q9BW11 206 aa13.46□□□□□ -0.25
HMGA2-209ENST00000539662 HACL1Q9UJ83 578 aa13.46□□□□□ -0.25
HMGA2-209ENST00000539662 RIPOR2Q9Y4F9 1068 aa13.46□□□□□ -0.25
HMGA2-209ENST00000539662 PSME4Q14997 1843 aa13.46□□□□□ -0.26
HMGA2-209ENST00000539662 EAPPQ56P03 285 aaPredicted RBP13.45□□□□□ -0.26
HMGA2-209ENST00000539662 PANK1Q8TE04 598 aa13.45□□□□□ -0.26
HMGA2-209ENST00000539662 ANKRD2Q9GZV1 360 aa13.45□□□□□ -0.26
HMGA2-209ENST00000539662 CNNM1Q9NRU3 951 aa13.45□□□□□ -0.26
HMGA2-209ENST00000539662 MED23Q9ULK4 1368 aa13.45□□□□□ -0.26
HMGA2-209ENST00000539662 EGFRP00533 1210 aa13.44□□□□□ -0.26
HMGA2-209ENST00000539662 HTRA3P83110 453 aa13.44□□□□□ -0.26
HMGA2-209ENST00000539662 PTPN12Q05209 780 aaKnown RBP13.44□□□□□ -0.26
HMGA2-209ENST00000539662 GPRC5DQ9NZD1 345 aa13.44□□□□□ -0.26
HMGA2-209ENST00000539662 PA2G4Q9UQ80 394 aaKnown RBP13.44□□□□□ -0.26
HMGA2-209ENST00000539662 LEMD3Q9Y2U8 911 aa13.44□□□□□ -0.26
HMGA2-209ENST00000539662 CEP350Q5VT06 3117 aa13.44□□□□□ -0.26
HMGA2-209ENST00000539662 IQCA1LA6NCM1 817 aa13.43□□□□□ -0.26
HMGA2-209ENST00000539662 HIRAP54198 1017 aaPredicted RBP13.43□□□□□ -0.26
HMGA2-209ENST00000539662 DZIP1LQ8IYY4 767 aaKnown RBP13.43□□□□□ -0.26
HMGA2-209ENST00000539662 C1orf115Q9H7X2 142 aa13.43□□□□□ -0.26
HMGA2-209ENST00000539662 KCNJ4P48050 445 aa13.42□□□□□ -0.26
HMGA2-209ENST00000539662 FMR1Q06787 632 aaKnown RBP eCLIP13.42□□□□□ -0.26
HMGA2-209ENST00000539662 TNIP1Q15025 636 aa13.42□□□□□ -0.26
HMGA2-209ENST00000539662 ATG9AQ7Z3C6 839 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms