RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 NT5DC4Q86YG4 428 aa5.08□□□□□ -1.6
SNHG1-210ENST00000539303 PNMA5Q96PV4 448 aa5.08□□□□□ -1.6
SNHG1-210ENST00000539303 ATXN7L1Q9ULK2 861 aaPredicted RBP5.08□□□□□ -1.6
SNHG1-210ENST00000539303 METTL12A8MUP2 240 aa5.07□□□□□ -1.6
SNHG1-210ENST00000539303 PHF20L1A8MW92 1017 aa5.07□□□□□ -1.6
SNHG1-210ENST00000539303 J3QW42 95 aa5.07□□□□□ -1.6
SNHG1-210ENST00000539303 ZNF76P36508 570 aa5.07□□□□□ -1.6
SNHG1-210ENST00000539303 TBC1D8BQ0IIM8 1120 aa5.07□□□□□ -1.6
SNHG1-210ENST00000539303 LAMC2Q13753 1193 aa5.07□□□□□ -1.6
SNHG1-210ENST00000539303 ZNF394Q53GI3 561 aa5.07□□□□□ -1.6
SNHG1-210ENST00000539303 ADAMTSL4Q6UY14 1074 aa5.07□□□□□ -1.6
SNHG1-210ENST00000539303 DHX32Q7L7V1 743 aaKnown RBP5.07□□□□□ -1.6
SNHG1-210ENST00000539303 ZKSCAN3Q9BRR0 538 aa5.07□□□□□ -1.6
SNHG1-210ENST00000539303 BCL11AQ9H165 835 aa5.07□□□□□ -1.6
SNHG1-210ENST00000539303 EHD4Q9H223 541 aa5.07□□□□□ -1.6
SNHG1-210ENST00000539303 SUV39H2Q9H5I1 410 aa5.07□□□□□ -1.6
SNHG1-210ENST00000539303 IGFLR1Q9H665 355 aa5.07□□□□□ -1.6
SNHG1-210ENST00000539303 TLR7Q9NYK1 1049 aaKnown RBP5.07□□□□□ -1.6
SNHG1-210ENST00000539303 PCDHGB7Q9Y5F8 929 aa5.07□□□□□ -1.6
SNHG1-210ENST00000539303 F6X3S4 739 aa5.06□□□□□ -1.6
SNHG1-210ENST00000539303 FBXO24O75426 580 aa5.06□□□□□ -1.6
SNHG1-210ENST00000539303 KIF4AO95239 1232 aa5.06□□□□□ -1.6
SNHG1-210ENST00000539303 TNNI2P48788 182 aa5.06□□□□□ -1.6
SNHG1-210ENST00000539303 FCGRTP55899 365 aa5.06□□□□□ -1.6
SNHG1-210ENST00000539303 ATP11AP98196 1134 aa5.06□□□□□ -1.6
SNHG1-210ENST00000539303 KIAA0319Q5VV43 1072 aa5.06□□□□□ -1.6
SNHG1-210ENST00000539303 NCAPG2Q86XI2 1143 aa5.06□□□□□ -1.6
SNHG1-210ENST00000539303 C3orf58Q8NDZ4 430 aa5.06□□□□□ -1.6
SNHG1-210ENST00000539303 RNF34Q969K3 372 aa5.06□□□□□ -1.6
SNHG1-210ENST00000539303 TCF12Q99081 682 aa5.06□□□□□ -1.6
SNHG1-210ENST00000539303 TRIM56Q9BRZ2 755 aaKnown RBP5.06□□□□□ -1.6
SNHG1-210ENST00000539303 ACBD3Q9H3P7 528 aa5.06□□□□□ -1.6
SNHG1-210ENST00000539303 ABCB6Q9NP58 842 aa5.06□□□□□ -1.6
SNHG1-210ENST00000539303 C11orf16Q9NQ32 467 aa5.06□□□□□ -1.6
SNHG1-210ENST00000539303 FAM8A1Q9UBU6 413 aa5.06□□□□□ -1.6
SNHG1-210ENST00000539303 USP31Q70CQ4 1352 aa5.05□□□□□ -1.6
SNHG1-210ENST00000539303 PSAPP07602 524 aa5.05□□□□□ -1.6
SNHG1-210ENST00000539303 EDN3P14138 238 aa5.05□□□□□ -1.6
SNHG1-210ENST00000539303 GRIA4P48058 902 aa5.05□□□□□ -1.6
SNHG1-210ENST00000539303 PCBP4P57723 403 aaKnown RBP5.05□□□□□ -1.6
SNHG1-210ENST00000539303 RACK1P63244 317 aaKnown RBP5.05□□□□□ -1.6
SNHG1-210ENST00000539303 PLAURQ03405 335 aa5.05□□□□□ -1.6
SNHG1-210ENST00000539303 GAS6Q14393 721 aa5.05□□□□□ -1.6
SNHG1-210ENST00000539303 NAALADL2Q58DX5 795 aa5.05□□□□□ -1.6
SNHG1-210ENST00000539303 SYT9Q86SS6 491 aa5.05□□□□□ -1.6
SNHG1-210ENST00000539303 GPR161Q8N6U8 529 aaKnown RBP5.05□□□□□ -1.6
SNHG1-210ENST00000539303 CEP120Q8N960 986 aa5.05□□□□□ -1.6
SNHG1-210ENST00000539303 FRMD6Q96NE9 622 aa5.05□□□□□ -1.6
SNHG1-210ENST00000539303 OSMRQ99650 979 aa5.05□□□□□ -1.6
SNHG1-210ENST00000539303 LIN7BQ9HAP6 207 aa5.05□□□□□ -1.6
SNHG1-210ENST00000539303 COPRSQ9NQ92 184 aa5.05□□□□□ -1.6
SNHG1-210ENST00000539303 USP35Q9P2H5 1018 aa5.05□□□□□ -1.6
SNHG1-210ENST00000539303 KLF15Q9UIH9 416 aa5.05□□□□□ -1.6
SNHG1-210ENST00000539303 NFKBIEO00221 500 aa5.04□□□□□ -1.6
SNHG1-210ENST00000539303 MAP3K6O95382 1288 aa5.04□□□□□ -1.6
SNHG1-210ENST00000539303 SOX18P35713 384 aa5.04□□□□□ -1.6
SNHG1-210ENST00000539303 ZC3H6P61129 1189 aaKnown RBP5.04□□□□□ -1.6
SNHG1-210ENST00000539303 MAP3K10Q02779 954 aa5.04□□□□□ -1.6
SNHG1-210ENST00000539303 SPRED3Q2MJR0 410 aa5.04□□□□□ -1.6
SNHG1-210ENST00000539303 FAM182BQ5T319 152 aa5.04□□□□□ -1.6
SNHG1-210ENST00000539303 PMEPA1Q969W9 287 aa5.04□□□□□ -1.6
SNHG1-210ENST00000539303 GMCL1Q96IK5 515 aa5.04□□□□□ -1.6
SNHG1-210ENST00000539303 OXCT2Q9BYC2 517 aaPredicted RBP5.04□□□□□ -1.6
SNHG1-210ENST00000539303 RASSF4Q9H2L5 321 aa5.04□□□□□ -1.6
SNHG1-210ENST00000539303 METTL5Q9NRN9 209 aaKnown RBP5.04□□□□□ -1.6
SNHG1-210ENST00000539303 DZANK1Q9NVP4 752 aa5.04□□□□□ -1.6
SNHG1-210ENST00000539303 DNAJB12Q9NXW2 375 aaKnown RBP5.04□□□□□ -1.6
SNHG1-210ENST00000539303 NAGPAQ9UK23 515 aa5.04□□□□□ -1.6
SNHG1-210ENST00000539303 LOC105371045A0A1W2PR82 267 aa5.03□□□□□ -1.6
SNHG1-210ENST00000539303 GIPC1O14908 333 aa5.03□□□□□ -1.6
SNHG1-210ENST00000539303 HOXD8P13378 290 aaPredicted RBP5.03□□□□□ -1.6
SNHG1-210ENST00000539303 HYAL2Q12891 473 aa5.03□□□□□ -1.6
SNHG1-210ENST00000539303 TAF1CQ15572 869 aaPredicted RBP5.03□□□□□ -1.6
SNHG1-210ENST00000539303 PRPF40BQ6NWY9 871 aaKnown RBP5.03□□□□□ -1.6
SNHG1-210ENST00000539303 SV2AQ7L0J3 742 aa5.03□□□□□ -1.6
SNHG1-210ENST00000539303 CCNJLQ8IV13 435 aa5.03□□□□□ -1.6
SNHG1-210ENST00000539303 C8orf37Q96NL8 207 aa5.03□□□□□ -1.6
SNHG1-210ENST00000539303 TRERF1Q96PN7 1200 aa5.03□□□□□ -1.6
SNHG1-210ENST00000539303 TINF2Q9BSI4 451 aa5.03□□□□□ -1.6
SNHG1-210ENST00000539303 UBE2OQ9C0C9 1292 aaKnown RBP5.03□□□□□ -1.6
SNHG1-210ENST00000539303 PRR12Q9ULL5 1215 aa5.03□□□□□ -1.6
SNHG1-210ENST00000539303 TTF2Q9UNY4 1162 aaKnown RBP5.03□□□□□ -1.6
SNHG1-210ENST00000539303 AKAP2Q9Y2D5 859 aa5.03□□□□□ -1.6
SNHG1-210ENST00000539303 LOC102724428A0A0B4J2F2 783 aa5.02□□□□□ -1.61
SNHG1-210ENST00000539303 TMEM238LA0A1B0GVL6 79 aa5.02□□□□□ -1.61
SNHG1-210ENST00000539303 BMP4P12644 408 aa5.02□□□□□ -1.61
SNHG1-210ENST00000539303 CPB1P15086 417 aa5.02□□□□□ -1.61
SNHG1-210ENST00000539303 GSTT1P30711 240 aa5.02□□□□□ -1.61
SNHG1-210ENST00000539303 NRLP54845 237 aa5.02□□□□□ -1.61
SNHG1-210ENST00000539303 SIK1P57059 783 aa5.02□□□□□ -1.61
SNHG1-210ENST00000539303 GPLD1P80108 840 aa5.02□□□□□ -1.61
SNHG1-210ENST00000539303 RNFT1Q5M7Z0 435 aa5.02□□□□□ -1.61
SNHG1-210ENST00000539303 ZNF468Q5VIY5 522 aaPredicted RBP5.02□□□□□ -1.61
SNHG1-210ENST00000539303 DTHD1Q6ZMT9 781 aa5.02□□□□□ -1.61
SNHG1-210ENST00000539303 USP48Q86UV5 1035 aa5.02□□□□□ -1.61
SNHG1-210ENST00000539303 TRPM4Q8TD43 1214 aa5.02□□□□□ -1.61
SNHG1-210ENST00000539303 ASAP3Q8TDY4 903 aa5.02□□□□□ -1.61
SNHG1-210ENST00000539303 NANOS1Q8WY41 292 aaKnown RBP5.02□□□□□ -1.61
SNHG1-210ENST00000539303 SRCIN1Q9C0H9 1055 aa5.02□□□□□ -1.61
SNHG1-210ENST00000539303 SRA1Q9HD15 236 aaKnown RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms