RNA–Protein interactions for RNA: ENST00000538859.1

NPIPB4-209, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-209ENST00000538859 SYDE1Q6ZW31 735 aaPredicted RBP3.56□□□□□ -1.84
NPIPB4-209ENST00000538859 BCL7CQ8WUZ0 217 aaPredicted RBP3.56□□□□□ -1.84
NPIPB4-209ENST00000538859 EFCC1Q9HA90 598 aa3.56□□□□□ -1.84
NPIPB4-209ENST00000538859 NEUROD4Q9HD90 331 aa3.56□□□□□ -1.84
NPIPB4-209ENST00000538859 PARD6AQ9NPB6 346 aa3.56□□□□□ -1.84
NPIPB4-209ENST00000538859 ADAMTS6Q9UKP5 1117 aa3.56□□□□□ -1.84
NPIPB4-209ENST00000538859 GPC6Q9Y625 555 aaPredicted RBP3.56□□□□□ -1.84
NPIPB4-209ENST00000538859 TMEM229AB2RXF0 380 aa3.55□□□□□ -1.84
NPIPB4-209ENST00000538859 BACH1O14867 736 aa3.55□□□□□ -1.84
NPIPB4-209ENST00000538859 CYP26A1O43174 497 aa3.55□□□□□ -1.84
NPIPB4-209ENST00000538859 ACAD11Q709F0 780 aa3.55□□□□□ -1.84
NPIPB4-209ENST00000538859 HSH2DQ96JZ2 352 aa3.55□□□□□ -1.84
NPIPB4-209ENST00000538859 SMG9Q9H0W8 520 aaKnown RBP3.55□□□□□ -1.84
NPIPB4-209ENST00000538859 MBNL3Q9NUK0 354 aaKnown RBP3.55□□□□□ -1.84
NPIPB4-209ENST00000538859 ZC3H7BQ9UGR2 993 aaKnown RBP3.55□□□□□ -1.84
NPIPB4-209ENST00000538859 SFI1A8K8P3 1242 aa3.54□□□□□ -1.84
NPIPB4-209ENST00000538859 ADRB1P08588 477 aa3.54□□□□□ -1.84
NPIPB4-209ENST00000538859 IRF5Q13568 498 aa3.54□□□□□ -1.84
NPIPB4-209ENST00000538859 NEUROD2Q15784 382 aa3.54□□□□□ -1.84
NPIPB4-209ENST00000538859 ZXDCQ2QGD7 858 aaPredicted RBP3.54□□□□□ -1.84
NPIPB4-209ENST00000538859 MAP4K3Q8IVH8 894 aa3.54□□□□□ -1.84
NPIPB4-209ENST00000538859 PLPP7Q8NBV4 271 aa3.54□□□□□ -1.84
NPIPB4-209ENST00000538859 TRPM4Q8TD43 1214 aa3.54□□□□□ -1.84
NPIPB4-209ENST00000538859 L3MBTL2Q969R5 705 aa3.54□□□□□ -1.84
NPIPB4-209ENST00000538859 RC3H2Q9HBD1 1191 aaKnown RBP3.54□□□□□ -1.84
NPIPB4-209ENST00000538859 TBC1D2BQ9UPU7 963 aa3.54□□□□□ -1.84
NPIPB4-209ENST00000538859 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.54□□□□□ -1.84
NPIPB4-209ENST00000538859 NPIPB6E9PJ23 425 aa3.53□□□□□ -1.84
NPIPB4-209ENST00000538859 NFKB1P19838 968 aa3.53□□□□□ -1.84
NPIPB4-209ENST00000538859 NOS2P35228 1153 aa3.53□□□□□ -1.84
NPIPB4-209ENST00000538859 PREPP48147 710 aa3.53□□□□□ -1.84
NPIPB4-209ENST00000538859 TEAD4Q15561 434 aa3.53□□□□□ -1.84
NPIPB4-209ENST00000538859 ZNF280CQ8ND82 737 aa3.53□□□□□ -1.84
NPIPB4-209ENST00000538859 LRRN4CLQ8ND94 238 aa3.53□□□□□ -1.84
NPIPB4-209ENST00000538859 GIMAP7Q8NHV1 300 aa3.53□□□□□ -1.84
NPIPB4-209ENST00000538859 PCDHGA11Q9Y5H2 935 aa3.53□□□□□ -1.84
NPIPB4-209ENST00000538859 VAC14Q08AM6 782 aa3.52□□□□□ -1.85
NPIPB4-209ENST00000538859 SEMA3FQ13275 785 aa3.52□□□□□ -1.85
NPIPB4-209ENST00000538859 IL22RA1Q8N6P7 574 aa3.52□□□□□ -1.85
NPIPB4-209ENST00000538859 BORCS6Q96GS4 357 aa3.52□□□□□ -1.85
NPIPB4-209ENST00000538859 SCHIP1Q9P0W5 487 aaPredicted RBP3.52□□□□□ -1.85
NPIPB4-209ENST00000538859 ZNF232Q9UNY5 417 aa3.52□□□□□ -1.85
NPIPB4-209ENST00000538859 ADMP35318 185 aa3.51□□□□□ -1.85
NPIPB4-209ENST00000538859 MLLT1Q03111 559 aaPredicted RBP3.51□□□□□ -1.85
NPIPB4-209ENST00000538859 PCSK7Q16549 785 aa3.51□□□□□ -1.85
NPIPB4-209ENST00000538859 WASHC4Q2M389 1173 aa3.51□□□□□ -1.85
NPIPB4-209ENST00000538859 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.51□□□□□ -1.85
NPIPB4-209ENST00000538859 DCAF11Q8TEB1 546 aa3.51□□□□□ -1.85
NPIPB4-209ENST00000538859 LIN37Q96GY3 246 aaPredicted RBP3.51□□□□□ -1.85
NPIPB4-209ENST00000538859 ANKIB1Q9P2G1 1089 aa3.51□□□□□ -1.85
NPIPB4-209ENST00000538859 SLC5A6Q9Y289 635 aa3.51□□□□□ -1.85
NPIPB4-209ENST00000538859 HIF3AQ9Y2N7 669 aa3.51□□□□□ -1.85
NPIPB4-209ENST00000538859 SERTM1A2A2V5 107 aa3.5□□□□□ -1.85
NPIPB4-209ENST00000538859 LZTS3O60299 673 aaPredicted RBP3.5□□□□□ -1.85
NPIPB4-209ENST00000538859 FUT4P22083 530 aa3.5□□□□□ -1.85
NPIPB4-209ENST00000538859 MAP4P27816 1152 aaKnown RBP3.5□□□□□ -1.85
NPIPB4-209ENST00000538859 SOX11P35716 441 aa3.5□□□□□ -1.85
NPIPB4-209ENST00000538859 EML3Q32P44 896 aa3.5□□□□□ -1.85
NPIPB4-209ENST00000538859 SH3PXD2AQ5TCZ1 1133 aa3.5□□□□□ -1.85
NPIPB4-209ENST00000538859 SLC9A9Q8IVB4 645 aa3.5□□□□□ -1.85
NPIPB4-209ENST00000538859 CXorf38Q8TB03 319 aa3.5□□□□□ -1.85
NPIPB4-209ENST00000538859 RHPN1Q8TCX5 695 aa3.5□□□□□ -1.85
NPIPB4-209ENST00000538859 METTL22Q9BUU2 404 aaPredicted RBP3.5□□□□□ -1.85
NPIPB4-209ENST00000538859 CD320Q9NPF0 282 aa3.5□□□□□ -1.85
NPIPB4-209ENST00000538859 ZNF358Q9NW07 568 aa3.5□□□□□ -1.85
NPIPB4-209ENST00000538859 ZFATQ9P243 1243 aa3.5□□□□□ -1.85
NPIPB4-209ENST00000538859 NOD1Q9Y239 953 aa3.5□□□□□ -1.85
NPIPB4-209ENST00000538859 ADAMTS20P59510 1910 aa3.5□□□□□ -1.85
NPIPB4-209ENST00000538859 MAP3K6O95382 1288 aa3.49□□□□□ -1.85
NPIPB4-209ENST00000538859 CD68P34810 354 aaPredicted RBP3.49□□□□□ -1.85
NPIPB4-209ENST00000538859 GTF2IP78347 998 aa3.49□□□□□ -1.85
NPIPB4-209ENST00000538859 PSME1Q06323 249 aa3.49□□□□□ -1.85
NPIPB4-209ENST00000538859 NFIXQ14938 502 aa3.49□□□□□ -1.85
NPIPB4-209ENST00000538859 SGO2Q562F6 1265 aa3.49□□□□□ -1.85
NPIPB4-209ENST00000538859 TBCELQ5QJ74 424 aa3.49□□□□□ -1.85
NPIPB4-209ENST00000538859 C1orf53Q5VUE5 145 aa3.49□□□□□ -1.85
NPIPB4-209ENST00000538859 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
NPIPB4-209ENST00000538859 ZSWIM9Q86XI8 627 aa3.49□□□□□ -1.85
NPIPB4-209ENST00000538859 TNS4Q8IZW8 715 aa3.49□□□□□ -1.85
NPIPB4-209ENST00000538859 GDPD2Q9HCC8 539 aa3.49□□□□□ -1.85
NPIPB4-209ENST00000538859 CRIM1Q9NZV1 1036 aa3.49□□□□□ -1.85
NPIPB4-209ENST00000538859 NFIBO00712 420 aa3.48□□□□□ -1.85
NPIPB4-209ENST00000538859 ABL2P42684 1182 aa3.48□□□□□ -1.85
NPIPB4-209ENST00000538859 EPHA4P54764 986 aa3.48□□□□□ -1.85
NPIPB4-209ENST00000538859 GPLD1P80108 840 aa3.48□□□□□ -1.85
NPIPB4-209ENST00000538859 BNIP3Q12983 259 aa3.48□□□□□ -1.85
NPIPB4-209ENST00000538859 HNRNPA0Q13151 305 aaKnown RBP3.48□□□□□ -1.85
NPIPB4-209ENST00000538859 CCINQ13939 588 aa3.48□□□□□ -1.85
NPIPB4-209ENST00000538859 KCNA10Q16322 511 aa3.48□□□□□ -1.85
NPIPB4-209ENST00000538859 GDF6Q6KF10 455 aaPredicted RBP3.48□□□□□ -1.85
NPIPB4-209ENST00000538859 PRR23BQ6ZRT6 265 aa3.48□□□□□ -1.85
NPIPB4-209ENST00000538859 HFE2Q6ZVN8 426 aa3.48□□□□□ -1.85
NPIPB4-209ENST00000538859 DHX32Q7L7V1 743 aaKnown RBP3.48□□□□□ -1.85
NPIPB4-209ENST00000538859 GATA6Q92908 595 aa3.48□□□□□ -1.85
NPIPB4-209ENST00000538859 HCN4Q9Y3Q4 1203 aa3.48□□□□□ -1.85
NPIPB4-209ENST00000538859 FAM170BA6NMN3 283 aa3.47□□□□□ -1.85
NPIPB4-209ENST00000538859 PIK3CDO00329 1044 aa3.47□□□□□ -1.85
NPIPB4-209ENST00000538859 RTN1Q16799 776 aa3.47□□□□□ -1.85
NPIPB4-209ENST00000538859 BCANQ96GW7 911 aa3.47□□□□□ -1.85
NPIPB4-209ENST00000538859 SUSD3Q96L08 255 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms