RNA–Protein interactions for RNA: ENST00000538410.5

COPS7A-208, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3 BASIC

Gene COPS7A, Length 1,610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-208ENST00000538410 FBXO3Q9UK99 471 aa25.36■■□□□ 1.65
COPS7A-208ENST00000538410 EYA2O00167 538 aa25.35■■□□□ 1.65
COPS7A-208ENST00000538410 CIAO1O76071 339 aa25.35■■□□□ 1.65
COPS7A-208ENST00000538410 TTLL6Q8N841 843 aa25.35■■□□□ 1.65
COPS7A-208ENST00000538410 BCL11AQ9H165 835 aa25.35■■□□□ 1.65
COPS7A-208ENST00000538410 ATG9AQ7Z3C6 839 aa25.34■■□□□ 1.65
COPS7A-208ENST00000538410 IL15P40933 162 aaPredicted RBP25.34■■□□□ 1.65
COPS7A-208ENST00000538410 LRRC24Q50LG9 513 aa25.33■■□□□ 1.65
COPS7A-208ENST00000538410 PLEKHM2Q8IWE5 1019 aa25.33■■□□□ 1.65
COPS7A-208ENST00000538410 ZNF622Q969S3 477 aaKnown RBP eCLIP25.33■■□□□ 1.65
COPS7A-208ENST00000538410 PUS3Q9BZE2 481 aaKnown RBP25.33■■□□□ 1.65
COPS7A-208ENST00000538410 GPBP1L1Q9HC44 474 aaPredicted RBP25.33■■□□□ 1.65
COPS7A-208ENST00000538410 CLASRPQ8N2M8 674 aaKnown RBP25.32■■□□□ 1.64
COPS7A-208ENST00000538410 OTUD7AQ8TE49 926 aaPredicted RBP25.32■■□□□ 1.64
COPS7A-208ENST00000538410 ZNF526Q8TF50 670 aaPredicted RBP25.32■■□□□ 1.64
COPS7A-208ENST00000538410 SEC31BQ9NQW1 1179 aa25.32■■□□□ 1.64
COPS7A-208ENST00000538410 COL11A2P13942 1736 aaPredicted RBP25.31■■□□□ 1.64
COPS7A-208ENST00000538410 SALL3Q9BXA9 1300 aa25.31■■□□□ 1.64
COPS7A-208ENST00000538410 COL4A1P02462 1669 aa25.31■■□□□ 1.64
COPS7A-208ENST00000538410 TFCP2Q12800 502 aa25.3■■□□□ 1.64
COPS7A-208ENST00000538410 LDHAL6AQ6ZMR3 332 aa25.3■■□□□ 1.64
COPS7A-208ENST00000538410 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.3■■□□□ 1.64
COPS7A-208ENST00000538410 SBF1O95248 1867 aa25.29■■□□□ 1.64
COPS7A-208ENST00000538410 A0A1B0GUL6 1792 aa25.29■■□□□ 1.64
COPS7A-208ENST00000538410 C9orf131Q5VYM1 1079 aa25.29■■□□□ 1.64
COPS7A-208ENST00000538410 RIPOR2Q9Y4F9 1068 aa25.29■■□□□ 1.64
COPS7A-208ENST00000538410 CDC5LQ99459 802 aaKnown RBP25.28■■□□□ 1.64
COPS7A-208ENST00000538410 CNNM1Q9NRU3 951 aa25.28■■□□□ 1.64
COPS7A-208ENST00000538410 OSBPL3Q9H4L5 887 aa25.27■■□□□ 1.64
COPS7A-208ENST00000538410 MX1P20591 662 aa25.26■■□□□ 1.63
COPS7A-208ENST00000538410 IGHMBP2P38935 993 aaKnown RBP25.26■■□□□ 1.63
COPS7A-208ENST00000538410 C1QTNF8P60827 252 aa25.26■■□□□ 1.63
COPS7A-208ENST00000538410 EAF2Q96CJ1 260 aaPredicted RBP25.26■■□□□ 1.63
COPS7A-208ENST00000538410 GPR108Q9NPR9 543 aa25.26■■□□□ 1.63
COPS7A-208ENST00000538410 CACNA1SQ13698 1873 aa25.26■■□□□ 1.63
COPS7A-208ENST00000538410 SRGNP10124 158 aa25.26■■□□□ 1.63
COPS7A-208ENST00000538410 PDE1AP54750 535 aa25.26■■□□□ 1.63
COPS7A-208ENST00000538410 STYK1Q6J9G0 422 aa25.26■■□□□ 1.63
COPS7A-208ENST00000538410 AACSQ86V21 672 aa25.26■■□□□ 1.63
COPS7A-208ENST00000538410 CNKSR1Q969H4 720 aa25.26■■□□□ 1.63
COPS7A-208ENST00000538410 MASTLQ96GX5 879 aa25.26■■□□□ 1.63
COPS7A-208ENST00000538410 MPHOSPH8Q99549 860 aa25.26■■□□□ 1.63
COPS7A-208ENST00000538410 CEP126Q9P2H0 1117 aa25.26■■□□□ 1.63
COPS7A-208ENST00000538410 STAP2Q9UGK3 403 aa25.26■■□□□ 1.63
COPS7A-208ENST00000538410 IFIT2P09913 472 aaKnown RBP25.25■■□□□ 1.63
COPS7A-208ENST00000538410 CRY2Q49AN0 593 aa25.25■■□□□ 1.63
COPS7A-208ENST00000538410 TNNI3KQ59H18 835 aa25.25■■□□□ 1.63
COPS7A-208ENST00000538410 RNF181Q9P0P0 153 aa25.25■■□□□ 1.63
COPS7A-208ENST00000538410 FPGT-TNNI3KV9GXZ4 949 aa25.25■■□□□ 1.63
COPS7A-208ENST00000538410 DDX46Q7L014 1031 aaKnown RBP25.24■■□□□ 1.63
COPS7A-208ENST00000538410 ANKRD18AQ8IVF6 992 aa25.24■■□□□ 1.63
COPS7A-208ENST00000538410 KLRG2A4D1S0 409 aaPredicted RBP25.23■■□□□ 1.63
COPS7A-208ENST00000538410 RASSF7Q02833 373 aa25.23■■□□□ 1.63
COPS7A-208ENST00000538410 METTL24Q5JXM2 366 aa25.23■■□□□ 1.63
COPS7A-208ENST00000538410 CELF1Q92879 486 aaKnown RBP25.23■■□□□ 1.63
COPS7A-208ENST00000538410 ZNF219Q9P2Y4 722 aaPredicted RBP25.23■■□□□ 1.63
COPS7A-208ENST00000538410 MROH5Q6ZUA9 1318 aa25.22■■□□□ 1.63
COPS7A-208ENST00000538410 ZNF609O15014 1411 aa25.22■■□□□ 1.63
COPS7A-208ENST00000538410 SLX4Q8IY92 1834 aa25.22■■□□□ 1.63
COPS7A-208ENST00000538410 CCDC88AQ3V6T2 1871 aa25.22■■□□□ 1.63
COPS7A-208ENST00000538410 AK9Q5TCS8 1911 aa25.22■■□□□ 1.63
COPS7A-208ENST00000538410 C21orf2O43822 256 aa25.22■■□□□ 1.63
COPS7A-208ENST00000538410 CCDC8Q9H0W5 538 aaPredicted RBP25.22■■□□□ 1.63
COPS7A-208ENST00000538410 AOX1Q06278 1338 aa25.22■■□□□ 1.63
COPS7A-208ENST00000538410 RPS8P62241 208 aaKnown RBP25.21■■□□□ 1.63
COPS7A-208ENST00000538410 TTC22Q5TAA0 569 aa25.21■■□□□ 1.63
COPS7A-208ENST00000538410 VGLL2Q8N8G2 317 aa25.21■■□□□ 1.63
COPS7A-208ENST00000538410 ARAP2Q8WZ64 1704 aa25.21■■□□□ 1.63
COPS7A-208ENST00000538410 RPGRQ92834 1020 aaKnown RBP25.21■■□□□ 1.63
COPS7A-208ENST00000538410 BSDC1Q9NW68 430 aaPredicted RBP25.21■■□□□ 1.63
COPS7A-208ENST00000538410 TTC41PQ6P2S7 1318 aa25.2■■□□□ 1.62
COPS7A-208ENST00000538410 NPR1P16066 1061 aa25.2■■□□□ 1.62
COPS7A-208ENST00000538410 BMP2KLQ5H9B9 411 aa25.2■■□□□ 1.62
COPS7A-208ENST00000538410 AKAP2Q9Y2D5 859 aa25.2■■□□□ 1.62
COPS7A-208ENST00000538410 LMNB1P20700 586 aa25.19■■□□□ 1.62
COPS7A-208ENST00000538410 PRPF40BQ6NWY9 871 aaKnown RBP25.19■■□□□ 1.62
COPS7A-208ENST00000538410 PDE8BO95263 885 aa25.19■■□□□ 1.62
COPS7A-208ENST00000538410 HOXA10P31260 410 aaPredicted RBP25.19■■□□□ 1.62
COPS7A-208ENST00000538410 GRAPQ13588 217 aa25.19■■□□□ 1.62
COPS7A-208ENST00000538410 TSHZ3Q63HK5 1081 aa25.19■■□□□ 1.62
COPS7A-208ENST00000538410 GRAPLQ8TC17 118 aaPredicted RBP25.19■■□□□ 1.62
COPS7A-208ENST00000538410 RBM17Q96I25 401 aaKnown RBP25.19■■□□□ 1.62
COPS7A-208ENST00000538410 GPATCH3Q96I76 525 aa25.19■■□□□ 1.62
COPS7A-208ENST00000538410 TLR7Q9NYK1 1049 aaKnown RBP25.19■■□□□ 1.62
COPS7A-208ENST00000538410 FER1L6Q2WGJ9 1857 aa25.18■■□□□ 1.62
COPS7A-208ENST00000538410 GSPT1P15170 499 aaKnown RBP25.18■■□□□ 1.62
COPS7A-208ENST00000538410 ECHDC1Q9NTX5 307 aa25.18■■□□□ 1.62
COPS7A-208ENST00000538410 DBNLQ9UJU6 430 aaKnown RBP25.18■■□□□ 1.62
COPS7A-208ENST00000538410 A0A1B0GUL7 405 aa25.17■■□□□ 1.62
COPS7A-208ENST00000538410 NFKBIEO00221 500 aa25.17■■□□□ 1.62
COPS7A-208ENST00000538410 TIMM10P62072 90 aa25.17■■□□□ 1.62
COPS7A-208ENST00000538410 PI4K2BQ8TCG2 481 aa25.17■■□□□ 1.62
COPS7A-208ENST00000538410 SOGA3Q5TF21 947 aa25.16■■□□□ 1.62
COPS7A-208ENST00000538410 NEUROD6Q96NK8 337 aa25.16■■□□□ 1.62
COPS7A-208ENST00000538410 DBNDD2Q9BQY9 259 aa25.16■■□□□ 1.62
COPS7A-208ENST00000538410 CHRNDQ07001 517 aa25.15■■□□□ 1.62
COPS7A-208ENST00000538410 ATP2B3Q16720 1220 aa25.15■■□□□ 1.62
COPS7A-208ENST00000538410 HELBQ8NG08 1087 aaPredicted RBP25.15■■□□□ 1.62
COPS7A-208ENST00000538410 CRAMP1Q96RY5 1269 aa25.15■■□□□ 1.62
COPS7A-208ENST00000538410 KIF3CO14782 793 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms