RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 RRAGBQ5VZM2 374 aa19.22■□□□□ 0.67
SCARB1-205ENST00000538291 C6orf50Q9HD87 102 aa19.22■□□□□ 0.67
SCARB1-205ENST00000538291 UHRF1BP1LA0JNW5 1464 aa19.22■□□□□ 0.67
SCARB1-205ENST00000538291 TSNARE1Q96NA8 513 aa19.21■□□□□ 0.67
SCARB1-205ENST00000538291 TFCP2L1Q9NZI6 479 aa19.21■□□□□ 0.67
SCARB1-205ENST00000538291 EHBP1Q8NDI1 1231 aa19.21■□□□□ 0.67
SCARB1-205ENST00000538291 ISM2Q6H9L7 571 aa19.21■□□□□ 0.67
SCARB1-205ENST00000538291 MEIS3Q99687 375 aa19.21■□□□□ 0.67
SCARB1-205ENST00000538291 BIVM-ERCC5R4GMW8 1640 aa19.21■□□□□ 0.67
SCARB1-205ENST00000538291 MAGEB6P1A0A0J9YX57 407 aa19.21■□□□□ 0.67
SCARB1-205ENST00000538291 RBM27Q9P2N5 1060 aaKnown RBP19.21■□□□□ 0.67
SCARB1-205ENST00000538291 LMAN1P49257 510 aa19.2■□□□□ 0.66
SCARB1-205ENST00000538291 LRRC45Q96CN5 670 aa19.2■□□□□ 0.66
SCARB1-205ENST00000538291 GRIPAP1Q4V328 841 aa19.2■□□□□ 0.66
SCARB1-205ENST00000538291 KCNG4Q8TDN1 519 aa19.2■□□□□ 0.66
SCARB1-205ENST00000538291 GNAT2P19087 354 aa19.2■□□□□ 0.66
SCARB1-205ENST00000538291 EYA3Q99504 573 aa19.2■□□□□ 0.66
SCARB1-205ENST00000538291 SSX2IPQ9Y2D8 614 aa19.2■□□□□ 0.66
SCARB1-205ENST00000538291 TMX1Q9H3N1 280 aa19.2■□□□□ 0.66
SCARB1-205ENST00000538291 KDM5BQ9UGL1 1544 aa19.19■□□□□ 0.66
SCARB1-205ENST00000538291 CALM1P0DP23 149 aa19.19■□□□□ 0.66
SCARB1-205ENST00000538291 CALM2P0DP24 149 aa19.19■□□□□ 0.66
SCARB1-205ENST00000538291 CALM3P0DP25 149 aa19.19■□□□□ 0.66
SCARB1-205ENST00000538291 MAP3K9P80192 1104 aa19.19■□□□□ 0.66
SCARB1-205ENST00000538291 PPIP5K1Q6PFW1 1433 aa19.19■□□□□ 0.66
SCARB1-205ENST00000538291 RALGAPBQ86X10 1494 aa19.19■□□□□ 0.66
SCARB1-205ENST00000538291 TCHPQ9BT92 498 aa19.19■□□□□ 0.66
SCARB1-205ENST00000538291 NSFL1CQ9UNZ2 370 aaKnown RBP19.19■□□□□ 0.66
SCARB1-205ENST00000538291 RBM8AQ9Y5S9 174 aaKnown RBP19.19■□□□□ 0.66
SCARB1-205ENST00000538291 DISP3Q9P2K9 1392 aa19.19■□□□□ 0.66
SCARB1-205ENST00000538291 SPAG1Q07617 926 aa19.19■□□□□ 0.66
SCARB1-205ENST00000538291 NCBP1Q09161 790 aaKnown RBP19.19■□□□□ 0.66
SCARB1-205ENST00000538291 IMPG2Q9BZV3 1241 aa19.19■□□□□ 0.66
SCARB1-205ENST00000538291 JADE2Q9NQC1 790 aa19.19■□□□□ 0.66
SCARB1-205ENST00000538291 FBLN1P23142 703 aa19.18■□□□□ 0.66
SCARB1-205ENST00000538291 SPDYE3A6NKU9 549 aa19.18■□□□□ 0.66
SCARB1-205ENST00000538291 CTAGE1Q96RT6 745 aa19.18■□□□□ 0.66
SCARB1-205ENST00000538291 IKBKGQ9Y6K9 419 aa19.18■□□□□ 0.66
SCARB1-205ENST00000538291 AFMP43652 599 aa19.18■□□□□ 0.66
SCARB1-205ENST00000538291 ATP8B2P98198 1209 aa19.18■□□□□ 0.66
SCARB1-205ENST00000538291 KIAA0753Q2KHM9 967 aa19.18■□□□□ 0.66
SCARB1-205ENST00000538291 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.18■□□□□ 0.661e-6■■■□□ 17.3
SCARB1-205ENST00000538291 CCDC175P0C221 793 aa19.18■□□□□ 0.66
SCARB1-205ENST00000538291 GIGYF2Q6Y7W6 1299 aaKnown RBP19.18■□□□□ 0.66
SCARB1-205ENST00000538291 SKAP1Q86WV1 359 aa19.18■□□□□ 0.66
SCARB1-205ENST00000538291 DDX12PQ92771 950 aa19.18■□□□□ 0.66
SCARB1-205ENST00000538291 PSMD1Q99460 953 aa19.18■□□□□ 0.66
SCARB1-205ENST00000538291 ERICH4A6NGS2 130 aa19.17■□□□□ 0.66
SCARB1-205ENST00000538291 PLS1Q14651 629 aa19.17■□□□□ 0.66
SCARB1-205ENST00000538291 NECAB1Q8N987 351 aa19.17■□□□□ 0.66
SCARB1-205ENST00000538291 LINS1Q8NG48 757 aa19.17■□□□□ 0.66
SCARB1-205ENST00000538291 LRRC2Q9BYS8 371 aa19.17■□□□□ 0.66
SCARB1-205ENST00000538291 ANKRD2Q9GZV1 360 aa19.17■□□□□ 0.66
SCARB1-205ENST00000538291 URB2Q14146 1524 aaKnown RBP19.17■□□□□ 0.66
SCARB1-205ENST00000538291 ZSCAN22P10073 491 aaPredicted RBP19.17■□□□□ 0.66
SCARB1-205ENST00000538291 SDSP20132 328 aa19.17■□□□□ 0.66
SCARB1-205ENST00000538291 PDE1AP54750 535 aa19.17■□□□□ 0.66
SCARB1-205ENST00000538291 HDAC1Q13547 482 aaPredicted RBP19.17■□□□□ 0.66
SCARB1-205ENST00000538291 CALML3P27482 149 aa19.17■□□□□ 0.66
SCARB1-205ENST00000538291 C16orf45Q96MC5 204 aaPredicted RBP19.17■□□□□ 0.66
SCARB1-205ENST00000538291 PAG1Q9NWQ8 432 aa19.17■□□□□ 0.66
SCARB1-205ENST00000538291 NUCB1Q02818 461 aa19.17■□□□□ 0.66
SCARB1-205ENST00000538291 RBM26Q5T8P6 1007 aaKnown RBP19.17■□□□□ 0.66
SCARB1-205ENST00000538291 BBXQ8WY36 941 aaPredicted RBP19.17■□□□□ 0.66
SCARB1-205ENST00000538291 PSMA7O14818 248 aa19.16■□□□□ 0.66
SCARB1-205ENST00000538291 C16orf71Q8IYS4 520 aaPredicted RBP19.16■□□□□ 0.66
SCARB1-205ENST00000538291 RRP36Q96EU6 259 aaKnown RBP19.16■□□□□ 0.66
SCARB1-205ENST00000538291 RTL9Q8NET4 1388 aa19.16■□□□□ 0.66
SCARB1-205ENST00000538291 ANKRD44Q8N8A2 993 aa19.16■□□□□ 0.66
SCARB1-205ENST00000538291 FERP16591 822 aa19.16■□□□□ 0.66
SCARB1-205ENST00000538291 ASIC1P78348 528 aa19.16■□□□□ 0.66
SCARB1-205ENST00000538291 TMX3Q96JJ7 454 aa19.16■□□□□ 0.66
SCARB1-205ENST00000538291 IRS4O14654 1257 aaPredicted RBP19.16■□□□□ 0.66
SCARB1-205ENST00000538291 SNW1Q13573 536 aaKnown RBP19.16■□□□□ 0.66
SCARB1-205ENST00000538291 MCM9Q9NXL9 1143 aa19.16■□□□□ 0.66
SCARB1-205ENST00000538291 TEX14Q8IWB6 1497 aa19.15■□□□□ 0.66
SCARB1-205ENST00000538291 ADCY5O95622 1261 aa19.15■□□□□ 0.66
SCARB1-205ENST00000538291 C19orf44Q9H6X5 657 aa19.15■□□□□ 0.66
SCARB1-205ENST00000538291 CYLC1P35663 651 aaPredicted RBP19.15■□□□□ 0.66
SCARB1-205ENST00000538291 MICALCLQ6ZW33 695 aa19.15■□□□□ 0.66
SCARB1-205ENST00000538291 ZNF354CQ86Y25 554 aa19.15■□□□□ 0.66
SCARB1-205ENST00000538291 WDR7Q9Y4E6 1490 aa19.15■□□□□ 0.66
SCARB1-205ENST00000538291 NFATC2IPQ8NCF5 419 aa19.15■□□□□ 0.66
SCARB1-205ENST00000538291 CGNQ9P2M7 1197 aaKnown RBP19.15■□□□□ 0.66
SCARB1-205ENST00000538291 EIF4A2Q14240 407 aaKnown RBP19.14■□□□□ 0.66
SCARB1-205ENST00000538291 UVSSAQ2YD98 709 aa19.14■□□□□ 0.66
SCARB1-205ENST00000538291 Q6ZUG5 572 aa19.14■□□□□ 0.66
SCARB1-205ENST00000538291 RPRD2Q5VT52 1461 aaKnown RBP19.14■□□□□ 0.66
SCARB1-205ENST00000538291 KRT79Q5XKE5 535 aa19.14■□□□□ 0.65
SCARB1-205ENST00000538291 MAATS1Q7Z4T9 603 aa19.14■□□□□ 0.65
SCARB1-205ENST00000538291 CABLES1Q8TDN4 633 aa19.14■□□□□ 0.65
SCARB1-205ENST00000538291 MRPS27Q92552 414 aaKnown RBP19.14■□□□□ 0.65
SCARB1-205ENST00000538291 TRIM75PA6NK02 468 aa19.14■□□□□ 0.65
SCARB1-205ENST00000538291 ESYT1Q9BSJ8 1104 aa19.14■□□□□ 0.65
SCARB1-205ENST00000538291 TCEANC2Q96MN5 208 aa19.14■□□□□ 0.65
SCARB1-205ENST00000538291 TTC12Q9H892 705 aaPredicted RBP19.14■□□□□ 0.65
SCARB1-205ENST00000538291 UBASH3AP57075 661 aa19.13■□□□□ 0.65
SCARB1-205ENST00000538291 DCAF5Q96JK2 942 aa19.13■□□□□ 0.65
SCARB1-205ENST00000538291 FLT4P35916 1363 aa19.13■□□□□ 0.65
SCARB1-205ENST00000538291 RIMS2Q9UQ26 1411 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms