RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 CNNM1Q9NRU3 951 aa20.95■□□□□ 0.94
SNX17-210ENST00000537606 PDRG1Q9NUG6 133 aa20.95■□□□□ 0.94
SNX17-210ENST00000537606 PDE8AO60658 829 aa20.94■□□□□ 0.94
SNX17-210ENST00000537606 TCEANC2Q96MN5 208 aa20.94■□□□□ 0.94
SNX17-210ENST00000537606 ZSWIM6Q9HCJ5 1215 aa20.94■□□□□ 0.94
SNX17-210ENST00000537606 RIPOR2Q9Y4F9 1068 aa20.94■□□□□ 0.94
SNX17-210ENST00000537606 CYP46A1Q9Y6A2 500 aa20.94■□□□□ 0.94
SNX17-210ENST00000537606 MYH14Q7Z406 1995 aaKnown RBP20.94■□□□□ 0.94
SNX17-210ENST00000537606 JCADQ9P266 1359 aa20.93■□□□□ 0.94
SNX17-210ENST00000537606 GOLGA6L22H0YM25 854 aa20.93■□□□□ 0.94
SNX17-210ENST00000537606 CAMTA2O94983 1202 aa20.93■□□□□ 0.94
SNX17-210ENST00000537606 LARGE1O95461 756 aa20.93■□□□□ 0.94
SNX17-210ENST00000537606 MCMDC2Q4G0Z9 681 aa20.93■□□□□ 0.94
SNX17-210ENST00000537606 TTC39AQ5SRH9 613 aa20.93■□□□□ 0.94
SNX17-210ENST00000537606 L1TD1Q5T7N2 865 aaKnown RBP20.93■□□□□ 0.94
SNX17-210ENST00000537606 PANK2Q9BZ23 570 aa20.93■□□□□ 0.94
SNX17-210ENST00000537606 LIMCH1Q9UPQ0 1083 aa20.93■□□□□ 0.94
SNX17-210ENST00000537606 AKAP2Q9Y2D5 859 aa20.93■□□□□ 0.94
SNX17-210ENST00000537606 SCARF1Q14162 830 aa20.93■□□□□ 0.94
SNX17-210ENST00000537606 CCDC158Q5M9N0 1113 aa20.93■□□□□ 0.94
SNX17-210ENST00000537606 INTS4Q96HW7 963 aaKnown RBP20.93■□□□□ 0.94
SNX17-210ENST00000537606 USP21Q9UK80 565 aa20.92■□□□□ 0.94
SNX17-210ENST00000537606 FBXO3Q9UK99 471 aa20.92■□□□□ 0.94
SNX17-210ENST00000537606 PI16Q6UXB8 463 aa20.92■□□□□ 0.94
SNX17-210ENST00000537606 NIP7Q9Y221 180 aaKnown RBP eCLIP20.92■□□□□ 0.94
SNX17-210ENST00000537606 DDX49Q9Y6V7 483 aaKnown RBP20.92■□□□□ 0.94
SNX17-210ENST00000537606 ANKRD36CQ5JPF3 1778 aa20.91■□□□□ 0.94
SNX17-210ENST00000537606 HELBQ8NG08 1087 aaPredicted RBP20.91■□□□□ 0.94
SNX17-210ENST00000537606 SMARCC1Q92922 1105 aaPredicted RBP20.91■□□□□ 0.94
SNX17-210ENST00000537606 TM6SF1Q9BZW5 370 aa20.91■□□□□ 0.94
SNX17-210ENST00000537606 ATP2B3Q16720 1220 aa20.9■□□□□ 0.94
SNX17-210ENST00000537606 SKOR2Q2VWA4 1001 aaPredicted RBP20.9■□□□□ 0.94
SNX17-210ENST00000537606 VPS53Q5VIR6 699 aa20.9■□□□□ 0.94
SNX17-210ENST00000537606 RNF20Q5VTR2 975 aa20.9■□□□□ 0.94
SNX17-210ENST00000537606 GAS2L3Q86XJ1 694 aa20.9■□□□□ 0.94
SNX17-210ENST00000537606 LINC00116Q8NCU8 138 aa20.9■□□□□ 0.94
SNX17-210ENST00000537606 UTP14AQ9BVJ6 771 aaKnown RBP20.9■□□□□ 0.94
SNX17-210ENST00000537606 RIC1Q4ADV7 1423 aa20.9■□□□□ 0.94
SNX17-210ENST00000537606 SH3TC1Q8TE82 1336 aa20.9■□□□□ 0.94
SNX17-210ENST00000537606 FNBP4Q8N3X1 1017 aaPredicted RBP20.89■□□□□ 0.94
SNX17-210ENST00000537606 LMBRD1Q9NUN5 540 aa20.89■□□□□ 0.94
SNX17-210ENST00000537606 FOXD4L6Q3SYB3 417 aaPredicted RBP20.89■□□□□ 0.93
SNX17-210ENST00000537606 FOXD4L3Q6VB84 417 aaPredicted RBP20.89■□□□□ 0.93
SNX17-210ENST00000537606 SEC31BQ9NQW1 1179 aa20.89■□□□□ 0.93
SNX17-210ENST00000537606 ZAP70P43403 619 aa20.88■□□□□ 0.93
SNX17-210ENST00000537606 CCDC83Q8IWF9 413 aa20.88■□□□□ 0.93
SNX17-210ENST00000537606 PRPF40AO75400 957 aaKnown RBP20.88■□□□□ 0.93
SNX17-210ENST00000537606 RFX7Q2KHR2 1363 aa20.88■□□□□ 0.93
SNX17-210ENST00000537606 SNAP23O00161 211 aa20.87■□□□□ 0.93
SNX17-210ENST00000537606 NCLP19338 710 aaKnown RBP20.87■□□□□ 0.93
SNX17-210ENST00000537606 PTMSP20962 102 aa20.87■□□□□ 0.93
SNX17-210ENST00000537606 PSMA5P28066 241 aa20.87■□□□□ 0.93
SNX17-210ENST00000537606 USPL1Q5W0Q7 1092 aa20.87■□□□□ 0.93
SNX17-210ENST00000537606 BLOC1S2Q6QNY1 142 aa20.87■□□□□ 0.93
SNX17-210ENST00000537606 RPAP1Q9BWH6 1393 aaPredicted RBP20.87■□□□□ 0.93
SNX17-210ENST00000537606 BRD1O95696 1058 aa20.87■□□□□ 0.93
SNX17-210ENST00000537606 NECAB1Q8N987 351 aa20.87■□□□□ 0.93
SNX17-210ENST00000537606 MYH3P11055 1940 aa20.86■□□□□ 0.93
SNX17-210ENST00000537606 RNF113AO15541 343 aaKnown RBP20.86■□□□□ 0.93
SNX17-210ENST00000537606 ME3Q16798 604 aa20.86■□□□□ 0.93
SNX17-210ENST00000537606 ZMYM1Q5SVZ6 1142 aa20.86■□□□□ 0.93
SNX17-210ENST00000537606 VGLL2Q8N8G2 317 aa20.86■□□□□ 0.93
SNX17-210ENST00000537606 TPCN1Q9ULQ1 816 aa20.86■□□□□ 0.93
SNX17-210ENST00000537606 PDE8BO95263 885 aa20.86■□□□□ 0.93
SNX17-210ENST00000537606 CYP21A2P08686 494 aa20.86■□□□□ 0.93
SNX17-210ENST00000537606 KLHL40Q2TBA0 621 aa20.86■□□□□ 0.93
SNX17-210ENST00000537606 A0A0G2JLW4 131 aa20.85■□□□□ 0.93
SNX17-210ENST00000537606 PRKCSHP14314 528 aaPredicted RBP20.85■□□□□ 0.93
SNX17-210ENST00000537606 BICDL1Q6ZP65 573 aa20.85■□□□□ 0.93
SNX17-210ENST00000537606 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.85■□□□□ 0.93
SNX17-210ENST00000537606 HELLSQ9NRZ9 838 aa20.85■□□□□ 0.93
SNX17-210ENST00000537606 MAST3O60307 1309 aa20.85■□□□□ 0.93
SNX17-210ENST00000537606 M0R2C6 588 aa20.85■□□□□ 0.93
SNX17-210ENST00000537606 RPS6KB1P23443 525 aa20.85■□□□□ 0.93
SNX17-210ENST00000537606 OSBP2Q969R2 916 aa20.85■□□□□ 0.93
SNX17-210ENST00000537606 GRPEL1Q9HAV7 217 aa20.85■□□□□ 0.93
SNX17-210ENST00000537606 HMG20BQ9P0W2 317 aa20.85■□□□□ 0.93
SNX17-210ENST00000537606 NTSR2O95665 410 aa20.84■□□□□ 0.93
SNX17-210ENST00000537606 MCAMP43121 646 aa20.84■□□□□ 0.93
SNX17-210ENST00000537606 U3KPZ7 1027 aaPredicted RBP20.84■□□□□ 0.93
SNX17-210ENST00000537606 ST3GAL1Q11201 340 aa20.84■□□□□ 0.93
SNX17-210ENST00000537606 WASHC4Q2M389 1173 aa20.84■□□□□ 0.93
SNX17-210ENST00000537606 PARP10Q53GL7 1025 aa20.84■□□□□ 0.93
SNX17-210ENST00000537606 MEX3CQ5U5Q3 659 aaKnown RBP20.84■□□□□ 0.93
SNX17-210ENST00000537606 CAVIN1Q6NZI2 390 aaKnown RBP20.83■□□□□ 0.93
SNX17-210ENST00000537606 SMC3Q9UQE7 1217 aa20.83■□□□□ 0.93
SNX17-210ENST00000537606 HSPD1P10809 573 aaKnown RBP20.83■□□□□ 0.92
SNX17-210ENST00000537606 TSGA10IPQ3SY00 556 aa20.83■□□□□ 0.92
SNX17-210ENST00000537606 MPHOSPH8Q99549 860 aa20.83■□□□□ 0.92
SNX17-210ENST00000537606 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.83■□□□□ 0.92
SNX17-210ENST00000537606 PHKA1P46020 1223 aa20.82■□□□□ 0.92
SNX17-210ENST00000537606 MRE11P49959 708 aa20.82■□□□□ 0.92
SNX17-210ENST00000537606 GPT2Q8TD30 523 aa20.82■□□□□ 0.92
SNX17-210ENST00000537606 NEK1Q96PY6 1258 aa20.82■□□□□ 0.92
SNX17-210ENST00000537606 TOB2Q14106 344 aaPredicted RBP20.82■□□□□ 0.92
SNX17-210ENST00000537606 LRRC2Q9BYS8 371 aa20.82■□□□□ 0.92
SNX17-210ENST00000537606 STOX1Q6ZVD7 989 aa20.81■□□□□ 0.92
SNX17-210ENST00000537606 ZSCAN31Q96LW9 406 aaPredicted RBP20.81■□□□□ 0.92
SNX17-210ENST00000537606 RBM27Q9P2N5 1060 aaKnown RBP20.81■□□□□ 0.92
SNX17-210ENST00000537606 NSFL1CQ9UNZ2 370 aaKnown RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms