RNA–Protein interactions for RNA: ENST00000537194.6

SMAD3-203, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-203ENST00000537194 GGA1Q9UJY5 639 aa11.54□□□□□ -0.56
SMAD3-203ENST00000537194 TRIM35Q9UPQ4 493 aa11.54□□□□□ -0.56
SMAD3-203ENST00000537194 ZBTB12Q9Y330 459 aaPredicted RBP11.54□□□□□ -0.56
SMAD3-203ENST00000537194 DDX60Q8IY21 1712 aaKnown RBP11.54□□□□□ -0.56
SMAD3-203ENST00000537194 AKAP11Q9UKA4 1901 aa11.53□□□□□ -0.56
SMAD3-203ENST00000537194 UFL1O94874 794 aa11.53□□□□□ -0.56
SMAD3-203ENST00000537194 HIRAP54198 1017 aaPredicted RBP11.53□□□□□ -0.56
SMAD3-203ENST00000537194 GPSM2P81274 684 aa11.53□□□□□ -0.56
SMAD3-203ENST00000537194 DOK7Q18PE1 504 aa11.53□□□□□ -0.56
SMAD3-203ENST00000537194 CCDC191Q8NCU4 936 aa11.53□□□□□ -0.56
SMAD3-203ENST00000537194 GBA2Q9HCG7 927 aaPredicted RBP11.53□□□□□ -0.56
SMAD3-203ENST00000537194 TSKSQ9UJT2 592 aa11.53□□□□□ -0.56
SMAD3-203ENST00000537194 ADAMTS8Q9UP79 889 aa11.53□□□□□ -0.56
SMAD3-203ENST00000537194 LRRC37AA6NMS7 1700 aa11.52□□□□□ -0.56
SMAD3-203ENST00000537194 PDE8AO60658 829 aa11.52□□□□□ -0.57
SMAD3-203ENST00000537194 ZNF157P51786 506 aaPredicted RBP11.52□□□□□ -0.57
SMAD3-203ENST00000537194 MLLT1Q03111 559 aaPredicted RBP11.52□□□□□ -0.57
SMAD3-203ENST00000537194 KIF4BQ2VIQ3 1234 aa11.52□□□□□ -0.57
SMAD3-203ENST00000537194 CCDC30Q5VVM6 783 aa11.52□□□□□ -0.57
SMAD3-203ENST00000537194 RGMBQ6NW40 437 aa11.52□□□□□ -0.57
SMAD3-203ENST00000537194 ANKRD18AQ8IVF6 992 aa11.52□□□□□ -0.57
SMAD3-203ENST00000537194 TBC1D16Q8TBP0 767 aa11.52□□□□□ -0.57
SMAD3-203ENST00000537194 CDC5LQ99459 802 aaKnown RBP11.52□□□□□ -0.57
SMAD3-203ENST00000537194 MYD88Q99836 296 aa11.52□□□□□ -0.57
SMAD3-203ENST00000537194 MBIPQ9NS73 344 aa11.52□□□□□ -0.57
SMAD3-203ENST00000537194 IFT57Q9NWB7 429 aa11.52□□□□□ -0.57
SMAD3-203ENST00000537194 CWC25Q9NXE8 425 aaPredicted RBP11.52□□□□□ -0.57
SMAD3-203ENST00000537194 POLLQ9UGP5 575 aa11.52□□□□□ -0.57
SMAD3-203ENST00000537194 PCCAP05165 728 aaPredicted RBP11.51□□□□□ -0.57
SMAD3-203ENST00000537194 NEXNQ0ZGT2 675 aa11.51□□□□□ -0.57
SMAD3-203ENST00000537194 DGKZQ13574 1117 aa11.51□□□□□ -0.57
SMAD3-203ENST00000537194 FAM161AQ3B820 660 aa11.51□□□□□ -0.57
SMAD3-203ENST00000537194 REM2Q8IYK8 340 aaPredicted RBP11.51□□□□□ -0.57
SMAD3-203ENST00000537194 AGBL3Q8NEM8 1001 aa11.51□□□□□ -0.57
SMAD3-203ENST00000537194 PODXL2Q9NZ53 605 aa11.51□□□□□ -0.57
SMAD3-203ENST00000537194 SHTN1A0MZ66 631 aa11.5□□□□□ -0.57
SMAD3-203ENST00000537194 ELL2O00472 640 aaPredicted RBP11.5□□□□□ -0.57
SMAD3-203ENST00000537194 VIL1P09327 827 aaKnown RBP11.5□□□□□ -0.57
SMAD3-203ENST00000537194 ATP2B4P23634 1241 aa11.5□□□□□ -0.57
SMAD3-203ENST00000537194 STK31Q9BXU1 1019 aa11.5□□□□□ -0.57
SMAD3-203ENST00000537194 XDHP47989 1333 aa11.5□□□□□ -0.57
SMAD3-203ENST00000537194 DUOX1Q9NRD9 1551 aa11.5□□□□□ -0.57
SMAD3-203ENST00000537194 APAF1O14727 1248 aa11.49□□□□□ -0.57
SMAD3-203ENST00000537194 MCOLN1Q9GZU1 580 aa11.49□□□□□ -0.57
SMAD3-203ENST00000537194 SEC31BQ9NQW1 1179 aa11.49□□□□□ -0.57
SMAD3-203ENST00000537194 SAGE1Q9NXZ1 904 aa11.49□□□□□ -0.57
SMAD3-203ENST00000537194 GGA3Q9NZ52 723 aa11.49□□□□□ -0.57
SMAD3-203ENST00000537194 ADM5C9JUS6 153 aa11.48□□□□□ -0.57
SMAD3-203ENST00000537194 USP17L8P0C7I0 530 aa11.48□□□□□ -0.57
SMAD3-203ENST00000537194 NF2P35240 595 aa11.48□□□□□ -0.57
SMAD3-203ENST00000537194 FKBP1BP68106 108 aa11.48□□□□□ -0.57
SMAD3-203ENST00000537194 RSBN1LQ6PCB5 846 aaPredicted RBP11.48□□□□□ -0.57
SMAD3-203ENST00000537194 PODNQ7Z5L7 613 aa11.48□□□□□ -0.57
SMAD3-203ENST00000537194 OGFOD1Q8N543 542 aa11.48□□□□□ -0.57
SMAD3-203ENST00000537194 METTL22Q9BUU2 404 aaPredicted RBP11.48□□□□□ -0.57
SMAD3-203ENST00000537194 PHAXQ9H814 394 aaKnown RBP11.48□□□□□ -0.57
SMAD3-203ENST00000537194 MYH3P11055 1940 aa11.47□□□□□ -0.57
SMAD3-203ENST00000537194 RTL9Q8NET4 1388 aa11.47□□□□□ -0.57
SMAD3-203ENST00000537194 USP17L3A6NCW0 530 aa11.47□□□□□ -0.57
SMAD3-203ENST00000537194 USP17L4A6NCW7 530 aa11.47□□□□□ -0.57
SMAD3-203ENST00000537194 ZNF853P0CG23 659 aa11.47□□□□□ -0.57
SMAD3-203ENST00000537194 KIF23Q02241 960 aaPredicted RBP11.47□□□□□ -0.57
SMAD3-203ENST00000537194 SCARF1Q14162 830 aa11.47□□□□□ -0.57
SMAD3-203ENST00000537194 USP17L1Q7RTZ2 530 aa11.47□□□□□ -0.57
SMAD3-203ENST00000537194 FBXW7Q969H0 707 aa11.47□□□□□ -0.57
SMAD3-203ENST00000537194 CCDC85AQ96PX6 553 aaPredicted RBP11.47□□□□□ -0.57
SMAD3-203ENST00000537194 KCNQ5Q9NR82 932 aa11.47□□□□□ -0.57
SMAD3-203ENST00000537194 PDE4DIPQ5VU43 2346 aa11.47□□□□□ -0.57
SMAD3-203ENST00000537194 TRPA1O75762 1119 aa11.46□□□□□ -0.57
SMAD3-203ENST00000537194 IGHMBP2P38935 993 aaKnown RBP11.46□□□□□ -0.57
SMAD3-203ENST00000537194 RGS19P49795 217 aa11.46□□□□□ -0.57
SMAD3-203ENST00000537194 MMP14P50281 582 aa11.46□□□□□ -0.57
SMAD3-203ENST00000537194 CTSWP56202 376 aa11.46□□□□□ -0.57
SMAD3-203ENST00000537194 ZNF280AP59817 542 aaPredicted RBP11.46□□□□□ -0.57
SMAD3-203ENST00000537194 TTLL12Q14166 644 aaPredicted RBP11.46□□□□□ -0.57
SMAD3-203ENST00000537194 ANGEL2Q5VTE6 544 aaKnown RBP11.46□□□□□ -0.57
SMAD3-203ENST00000537194 KSR2Q6VAB6 950 aa11.46□□□□□ -0.57
SMAD3-203ENST00000537194 CDCA5Q96FF9 252 aa11.46□□□□□ -0.57
SMAD3-203ENST00000537194 PRKRIP1Q9H875 184 aaPredicted RBP11.46□□□□□ -0.57
SMAD3-203ENST00000537194 MYOZ2Q9NPC6 264 aa11.46□□□□□ -0.57
SMAD3-203ENST00000537194 MAP3K2Q9Y2U5 619 aa11.46□□□□□ -0.57
SMAD3-203ENST00000537194 SCN9AQ15858 1988 aa11.46□□□□□ -0.58
SMAD3-203ENST00000537194 MYO3BQ8WXR4 1341 aa11.45□□□□□ -0.58
SMAD3-203ENST00000537194 PITPNM2Q9BZ72 1349 aa11.45□□□□□ -0.58
SMAD3-203ENST00000537194 EGFRP00533 1210 aa11.45□□□□□ -0.58
SMAD3-203ENST00000537194 SLC10A3P09131 477 aa11.45□□□□□ -0.58
SMAD3-203ENST00000537194 BSDC1Q9NW68 430 aaPredicted RBP11.45□□□□□ -0.58
SMAD3-203ENST00000537194 HDAC9Q9UKV0 1011 aa11.45□□□□□ -0.58
SMAD3-203ENST00000537194 PSME4Q14997 1843 aa11.44□□□□□ -0.58
SMAD3-203ENST00000537194 FAM155AB1AL88 458 aaPredicted RBP11.44□□□□□ -0.58
SMAD3-203ENST00000537194 KCNJ4P48050 445 aa11.44□□□□□ -0.58
SMAD3-203ENST00000537194 C8orf58Q8NAV2 365 aa11.44□□□□□ -0.58
SMAD3-203ENST00000537194 JARID2Q92833 1246 aaPredicted RBP11.44□□□□□ -0.58
SMAD3-203ENST00000537194 MPHOSPH8Q99549 860 aa11.44□□□□□ -0.58
SMAD3-203ENST00000537194 MYH16Q9H6N6 1097 aa11.44□□□□□ -0.58
SMAD3-203ENST00000537194 RNF186Q9NXI6 227 aa11.44□□□□□ -0.58
SMAD3-203ENST00000537194 CACNA1FO60840 1977 aa11.44□□□□□ -0.58
SMAD3-203ENST00000537194 PI4KAP2A4QPH2 592 aa11.43□□□□□ -0.58
SMAD3-203ENST00000537194 DLK2Q6UY11 383 aa11.43□□□□□ -0.58
SMAD3-203ENST00000537194 PI4KAP1Q8N8J0 262 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms