RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 ACEP12821 1306 aa6.85□□□□□ -1.31
CHD4-206ENST00000536999 TTC21AQ8NDW8 1320 aa6.85□□□□□ -1.31
CHD4-206ENST00000536999 USP42Q9H9J4 1324 aaKnown RBP6.85□□□□□ -1.31
CHD4-206ENST00000536999 GOLGA6L9A6NEM1 432 aa6.85□□□□□ -1.31
CHD4-206ENST00000536999 SGSM2O43147 1006 aa6.85□□□□□ -1.31
CHD4-206ENST00000536999 SYT1P21579 422 aa6.85□□□□□ -1.31
CHD4-206ENST00000536999 CLASRPQ8N2M8 674 aaKnown RBP6.85□□□□□ -1.31
CHD4-206ENST00000536999 TSPYL6Q8N831 410 aa6.85□□□□□ -1.31
CHD4-206ENST00000536999 ZNF397Q8NF99 534 aaPredicted RBP6.85□□□□□ -1.31
CHD4-206ENST00000536999 FLAD1Q8NFF5 587 aa6.85□□□□□ -1.31
CHD4-206ENST00000536999 KCNB2Q92953 911 aa6.85□□□□□ -1.31
CHD4-206ENST00000536999 EVI5LQ96CN4 794 aa6.85□□□□□ -1.31
CHD4-206ENST00000536999 ERO1AQ96HE7 468 aa6.85□□□□□ -1.31
CHD4-206ENST00000536999 MRFAP1L1Q96HT8 127 aa6.85□□□□□ -1.31
CHD4-206ENST00000536999 DNAJC2Q99543 621 aaKnown RBP6.85□□□□□ -1.31
CHD4-206ENST00000536999 NOL10Q9BSC4 688 aaKnown RBP6.85□□□□□ -1.31
CHD4-206ENST00000536999 TNMDQ9H2S6 317 aa6.85□□□□□ -1.31
CHD4-206ENST00000536999 C1orf115Q9H7X2 142 aa6.85□□□□□ -1.31
CHD4-206ENST00000536999 RNF181Q9P0P0 153 aa6.85□□□□□ -1.31
CHD4-206ENST00000536999 TSPYL4Q9UJ04 414 aa6.85□□□□□ -1.31
CHD4-206ENST00000536999 MORC2Q9Y6X9 1032 aaPredicted RBP6.85□□□□□ -1.31
CHD4-206ENST00000536999 CD163L1Q9NR16 1453 aa6.85□□□□□ -1.31
CHD4-206ENST00000536999 RPAP1Q9BWH6 1393 aaPredicted RBP6.84□□□□□ -1.31
CHD4-206ENST00000536999 PIK3C2AO00443 1686 aa6.84□□□□□ -1.31
CHD4-206ENST00000536999 SALL3Q9BXA9 1300 aa6.84□□□□□ -1.31
CHD4-206ENST00000536999 BECN2A8MW95 431 aa6.84□□□□□ -1.31
CHD4-206ENST00000536999 PITPNM1O00562 1244 aa6.84□□□□□ -1.31
CHD4-206ENST00000536999 TUBB2AQ13885 445 aa6.84□□□□□ -1.31
CHD4-206ENST00000536999 PTPN14Q15678 1187 aa6.84□□□□□ -1.31
CHD4-206ENST00000536999 LRRFIP1Q32MZ4 808 aaKnown RBP6.84□□□□□ -1.31
CHD4-206ENST00000536999 JAKMIP3Q5VZ66 844 aa6.84□□□□□ -1.31
CHD4-206ENST00000536999 LARP1BQ659C4 914 aaKnown RBP6.84□□□□□ -1.31
CHD4-206ENST00000536999 CTR9Q6PD62 1173 aa6.84□□□□□ -1.31
CHD4-206ENST00000536999 ZNF771Q7L3S4 317 aaPredicted RBP6.84□□□□□ -1.31
CHD4-206ENST00000536999 TDRD7Q8NHU6 1098 aaKnown RBP6.84□□□□□ -1.31
CHD4-206ENST00000536999 SSH3Q8TE77 659 aa6.84□□□□□ -1.31
CHD4-206ENST00000536999 PHACTR3Q96KR7 559 aa6.84□□□□□ -1.31
CHD4-206ENST00000536999 LLPHQ9BRT6 129 aaKnown RBP6.84□□□□□ -1.31
CHD4-206ENST00000536999 FUCA2Q9BTY2 467 aa6.84□□□□□ -1.31
CHD4-206ENST00000536999 TUBB2BQ9BVA1 445 aa6.84□□□□□ -1.31
CHD4-206ENST00000536999 BCL2L12Q9HB09 334 aa6.84□□□□□ -1.31
CHD4-206ENST00000536999 ZSWIM6Q9HCJ5 1215 aa6.84□□□□□ -1.31
CHD4-206ENST00000536999 CREBZFQ9NS37 354 aa6.84□□□□□ -1.31
CHD4-206ENST00000536999 PDRG1Q9NUG6 133 aa6.84□□□□□ -1.31
CHD4-206ENST00000536999 ANO10Q9NW15 660 aa6.84□□□□□ -1.31
CHD4-206ENST00000536999 CWC15Q9P013 229 aaKnown RBP6.84□□□□□ -1.31
CHD4-206ENST00000536999 RBM27Q9P2N5 1060 aaKnown RBP6.84□□□□□ -1.31
CHD4-206ENST00000536999 DDX41Q9UJV9 622 aaKnown RBP6.84□□□□□ -1.31
CHD4-206ENST00000536999 AXIN2Q9Y2T1 843 aa6.84□□□□□ -1.31
CHD4-206ENST00000536999 ITSN1Q15811 1721 aa6.84□□□□□ -1.31
CHD4-206ENST00000536999 KIF20BQ96Q89 1820 aa6.83□□□□□ -1.32
CHD4-206ENST00000536999 PLEKHG3A1L390 1219 aa6.83□□□□□ -1.32
CHD4-206ENST00000536999 ELL2O00472 640 aaPredicted RBP6.83□□□□□ -1.32
CHD4-206ENST00000536999 HMOX1P09601 288 aa6.83□□□□□ -1.32
CHD4-206ENST00000536999 TNNT1P13805 278 aa6.83□□□□□ -1.32
CHD4-206ENST00000536999 HCLS1P14317 486 aaPredicted RBP6.83□□□□□ -1.32
CHD4-206ENST00000536999 NLRP6P59044 892 aa6.83□□□□□ -1.32
CHD4-206ENST00000536999 PLCB2Q00722 1185 aa6.83□□□□□ -1.32
CHD4-206ENST00000536999 TPD52L1Q16890 204 aaPredicted RBP6.83□□□□□ -1.32
CHD4-206ENST00000536999 TSGA10IPQ3SY00 556 aa6.83□□□□□ -1.32
CHD4-206ENST00000536999 CEP135Q66GS9 1140 aa6.83□□□□□ -1.32
CHD4-206ENST00000536999 RBM43Q6ZSC3 357 aaKnown RBP6.83□□□□□ -1.32
CHD4-206ENST00000536999 RUFY3Q7L099 469 aa6.83□□□□□ -1.32
CHD4-206ENST00000536999 FILIP1Q7Z7B0 1213 aa6.83□□□□□ -1.32
CHD4-206ENST00000536999 CCDC150Q8NCX0 1101 aa6.83□□□□□ -1.32
CHD4-206ENST00000536999 DDX11Q96FC9 970 aa6.83□□□□□ -1.32
CHD4-206ENST00000536999 TIGD1Q96MW7 591 aa6.83□□□□□ -1.32
CHD4-206ENST00000536999 ZNF396Q96N95 335 aaPredicted RBP6.83□□□□□ -1.32
CHD4-206ENST00000536999 TRIM5Q9C035 493 aa6.83□□□□□ -1.32
CHD4-206ENST00000536999 TNRC6CQ9HCJ0 1690 aaKnown RBP6.83□□□□□ -1.32
CHD4-206ENST00000536999 RIOK3O14730 519 aaKnown RBP6.82□□□□□ -1.32
CHD4-206ENST00000536999 ALDH1L1O75891 902 aa6.82□□□□□ -1.32
CHD4-206ENST00000536999 HSPA8P11142 646 aaKnown RBP6.82□□□□□ -1.32
CHD4-206ENST00000536999 IL2RBP14784 551 aa6.82□□□□□ -1.32
CHD4-206ENST00000536999 VEGFAP15692 232 aaPredicted RBP6.82□□□□□ -1.32
CHD4-206ENST00000536999 KCNJ4P48050 445 aa6.82□□□□□ -1.32
CHD4-206ENST00000536999 ZNF165P49910 485 aa6.82□□□□□ -1.32
CHD4-206ENST00000536999 FLIIQ13045 1269 aa6.82□□□□□ -1.32
CHD4-206ENST00000536999 PKP1Q13835 747 aa6.82□□□□□ -1.32
CHD4-206ENST00000536999 PRPF38BQ5VTL8 546 aaKnown RBP6.82□□□□□ -1.32
CHD4-206ENST00000536999 SULT6B1Q6IMI4 303 aa6.82□□□□□ -1.32
CHD4-206ENST00000536999 SLC4A10Q6U841 1118 aa6.82□□□□□ -1.32
CHD4-206ENST00000536999 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.82□□□□□ -1.32
CHD4-206ENST00000536999 CCDC34Q96HJ3 373 aa6.82□□□□□ -1.32
CHD4-206ENST00000536999 SPATA32Q96LK8 384 aa6.82□□□□□ -1.32
CHD4-206ENST00000536999 TTC14Q96N46 770 aa6.82□□□□□ -1.32
CHD4-206ENST00000536999 MEIS3Q99687 375 aa6.82□□□□□ -1.32
CHD4-206ENST00000536999 ECHDC1Q9NTX5 307 aa6.82□□□□□ -1.32
CHD4-206ENST00000536999 HYPKQ9NX55 129 aa6.82□□□□□ -1.32
CHD4-206ENST00000536999 WBP1LQ9NX94 342 aa6.82□□□□□ -1.32
CHD4-206ENST00000536999 CNTNAP1P78357 1384 aa6.82□□□□□ -1.32
CHD4-206ENST00000536999 RFX7Q2KHR2 1363 aa6.82□□□□□ -1.32
CHD4-206ENST00000536999 A0A0G2JLW4 131 aa6.81□□□□□ -1.32
CHD4-206ENST00000536999 GNAT3A8MTJ3 354 aa6.81□□□□□ -1.32
CHD4-206ENST00000536999 SOX12O15370 315 aa6.81□□□□□ -1.32
CHD4-206ENST00000536999 CBFA2T2O43439 604 aa6.81□□□□□ -1.32
CHD4-206ENST00000536999 DHX16O60231 1041 aaKnown RBP6.81□□□□□ -1.32
CHD4-206ENST00000536999 SLU7O95391 586 aaKnown RBP6.81□□□□□ -1.32
CHD4-206ENST00000536999 IFIT2P09913 472 aaKnown RBP6.81□□□□□ -1.32
CHD4-206ENST00000536999 HMGB2P26583 209 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms