RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 ABCC4O15439 1325 aa22.81■■□□□ 1.24
CCDC61-201ENST00000536603 DDX60Q8IY21 1712 aaKnown RBP22.8■■□□□ 1.24
CCDC61-201ENST00000536603 CYP4F22Q6NT55 531 aa22.8■■□□□ 1.24
CCDC61-201ENST00000536603 SLC4A10Q6U841 1118 aa22.8■■□□□ 1.24
CCDC61-201ENST00000536603 GPRC5DQ9NZD1 345 aa22.8■■□□□ 1.24
CCDC61-201ENST00000536603 LAMB2P55268 1798 aa22.8■■□□□ 1.24
CCDC61-201ENST00000536603 H7C1W4 665 aa22.79■■□□□ 1.24
CCDC61-201ENST00000536603 PDE8AO60658 829 aa22.79■■□□□ 1.24
CCDC61-201ENST00000536603 CXCL9Q07325 125 aa22.79■■□□□ 1.24
CCDC61-201ENST00000536603 GPR101Q96P66 508 aaPredicted RBP22.79■■□□□ 1.24
CCDC61-201ENST00000536603 PTPRCP08575 1304 aa22.79■■□□□ 1.24
CCDC61-201ENST00000536603 CDHR2Q9BYE9 1310 aa22.79■■□□□ 1.24
CCDC61-201ENST00000536603 BBOX1O75936 387 aa22.78■■□□□ 1.24
CCDC61-201ENST00000536603 RARSP54136 660 aaKnown RBP22.78■■□□□ 1.24
CCDC61-201ENST00000536603 CST9Q5W186 159 aa22.78■■□□□ 1.24
CCDC61-201ENST00000536603 UBE3BQ7Z3V4 1068 aa22.78■■□□□ 1.24
CCDC61-201ENST00000536603 MPNDQ8N594 471 aa22.78■■□□□ 1.24
CCDC61-201ENST00000536603 GMPSP49915 693 aaPredicted RBP22.77■■□□□ 1.24
CCDC61-201ENST00000536603 SP8Q8IXZ3 490 aa22.77■■□□□ 1.24
CCDC61-201ENST00000536603 GRAPQ13588 217 aa22.76■■□□□ 1.23
CCDC61-201ENST00000536603 CIAPIN1Q6FI81 312 aa22.76■■□□□ 1.23
CCDC61-201ENST00000536603 GRAPLQ8TC17 118 aaPredicted RBP22.76■■□□□ 1.23
CCDC61-201ENST00000536603 ABHD8Q96I13 439 aa22.76■■□□□ 1.23
CCDC61-201ENST00000536603 TLL2Q9Y6L7 1015 aa22.76■■□□□ 1.23
CCDC61-201ENST00000536603 CELF2O95319 508 aaKnown RBP22.75■■□□□ 1.23
CCDC61-201ENST00000536603 TNIP1Q15025 636 aa22.75■■□□□ 1.23
CCDC61-201ENST00000536603 CCDC85AQ96PX6 553 aaPredicted RBP22.75■■□□□ 1.23
CCDC61-201ENST00000536603 RTFDC1Q9BY42 306 aaPredicted RBP22.75■■□□□ 1.23
CCDC61-201ENST00000536603 SRCIN1Q9C0H9 1055 aa22.75■■□□□ 1.23
CCDC61-201ENST00000536603 NOB1Q9ULX3 412 aaKnown RBP22.75■■□□□ 1.23
CCDC61-201ENST00000536603 RAD17O75943 681 aa22.74■■□□□ 1.23
CCDC61-201ENST00000536603 BRPF1P55201 1214 aaPredicted RBP22.74■■□□□ 1.23
CCDC61-201ENST00000536603 CASP7P55210 303 aa22.74■■□□□ 1.23
CCDC61-201ENST00000536603 CCDC152Q4G0S7 254 aa22.74■■□□□ 1.23
CCDC61-201ENST00000536603 CELF1Q92879 486 aaKnown RBP22.74■■□□□ 1.23
CCDC61-201ENST00000536603 ZNF408Q9H9D4 720 aa22.74■■□□□ 1.23
CCDC61-201ENST00000536603 THSD7BQ9C0I4 1608 aa22.73■■□□□ 1.23
CCDC61-201ENST00000536603 ALDH1L1O75891 902 aa22.73■■□□□ 1.23
CCDC61-201ENST00000536603 CTSWP56202 376 aa22.73■■□□□ 1.23
CCDC61-201ENST00000536603 KIAA2012Q0VF49 1180 aa22.73■■□□□ 1.23
CCDC61-201ENST00000536603 GLIS2Q9BZE0 524 aaPredicted RBP22.73■■□□□ 1.23
CCDC61-201ENST00000536603 SEC31BQ9NQW1 1179 aa22.73■■□□□ 1.23
CCDC61-201ENST00000536603 TAF1P21675 1872 aa22.73■■□□□ 1.23
CCDC61-201ENST00000536603 AOC2O75106 756 aa22.72■■□□□ 1.23
CCDC61-201ENST00000536603 C9orf78Q9NZ63 289 aaPredicted RBP22.72■■□□□ 1.23
CCDC61-201ENST00000536603 GRM8O00222 908 aa22.71■■□□□ 1.23
CCDC61-201ENST00000536603 MAP2K2P36507 400 aa22.71■■□□□ 1.23
CCDC61-201ENST00000536603 TTLL11Q8NHH1 800 aa22.71■■□□□ 1.23
CCDC61-201ENST00000536603 PLA2G12BQ9BX93 195 aa22.71■■□□□ 1.23
CCDC61-201ENST00000536603 TSKSQ9UJT2 592 aa22.71■■□□□ 1.23
CCDC61-201ENST00000536603 RPS8P62241 208 aaKnown RBP22.7■■□□□ 1.22
CCDC61-201ENST00000536603 SAPCD2Q86UD0 394 aa22.7■■□□□ 1.22
CCDC61-201ENST00000536603 CCDC85CA6NKD9 419 aa22.69■■□□□ 1.22
CCDC61-201ENST00000536603 H7C1D1 291 aa22.69■■□□□ 1.22
CCDC61-201ENST00000536603 BCAR3O75815 825 aa22.69■■□□□ 1.22
CCDC61-201ENST00000536603 TMC4Q7Z404 712 aa22.69■■□□□ 1.22
CCDC61-201ENST00000536603 CNOT7Q9UIV1 285 aaKnown RBP22.69■■□□□ 1.22
CCDC61-201ENST00000536603 CDC37L1Q7L3B6 337 aa22.68■■□□□ 1.22
CCDC61-201ENST00000536603 ZC3H15Q8WU90 426 aaKnown RBP22.68■■□□□ 1.22
CCDC61-201ENST00000536603 API5Q9BZZ5 524 aaKnown RBP22.68■■□□□ 1.22
CCDC61-201ENST00000536603 GREM2Q9H772 168 aa22.68■■□□□ 1.22
CCDC61-201ENST00000536603 KIF16BQ96L93 1317 aa22.67■■□□□ 1.22
CCDC61-201ENST00000536603 PGAP2Q9UHJ9 254 aa22.67■■□□□ 1.22
CCDC61-201ENST00000536603 NSFL1CQ9UNZ2 370 aaKnown RBP22.67■■□□□ 1.22
CCDC61-201ENST00000536603 COL4A1P02462 1669 aa22.67■■□□□ 1.22
CCDC61-201ENST00000536603 CSF1RP07333 972 aa22.66■■□□□ 1.22
CCDC61-201ENST00000536603 HIRAP54198 1017 aaPredicted RBP22.66■■□□□ 1.22
CCDC61-201ENST00000536603 FOXO4P98177 505 aa22.66■■□□□ 1.22
CCDC61-201ENST00000536603 WASHC4Q2M389 1173 aa22.66■■□□□ 1.22
CCDC61-201ENST00000536603 MICALL2Q8IY33 904 aa22.66■■□□□ 1.22
CCDC61-201ENST00000536603 TRPM4Q8TD43 1214 aa22.66■■□□□ 1.22
CCDC61-201ENST00000536603 MYH3P11055 1940 aa22.65■■□□□ 1.22
CCDC61-201ENST00000536603 YDJCA8MPS7 323 aa22.65■■□□□ 1.22
CCDC61-201ENST00000536603 C6orf229H3BNL8 230 aa22.65■■□□□ 1.22
CCDC61-201ENST00000536603 RIMBP2O15034 1052 aa22.65■■□□□ 1.22
CCDC61-201ENST00000536603 CA12O43570 354 aa22.65■■□□□ 1.22
CCDC61-201ENST00000536603 NBPF7P0C2Y1 421 aaPredicted RBP22.65■■□□□ 1.22
CCDC61-201ENST00000536603 FAM161AQ3B820 660 aa22.65■■□□□ 1.22
CCDC61-201ENST00000536603 ANKRD18AQ8IVF6 992 aa22.65■■□□□ 1.22
CCDC61-201ENST00000536603 ARHGAP45Q92619 1136 aa22.65■■□□□ 1.22
CCDC61-201ENST00000536603 FRAT1Q92837 279 aaPredicted RBP22.65■■□□□ 1.22
CCDC61-201ENST00000536603 HHIPL1Q96JK4 782 aa22.65■■□□□ 1.22
CCDC61-201ENST00000536603 CDC5LQ99459 802 aaKnown RBP22.65■■□□□ 1.22
CCDC61-201ENST00000536603 SHTN1A0MZ66 631 aa22.64■■□□□ 1.21
CCDC61-201ENST00000536603 IPO8O15397 1037 aaKnown RBP22.64■■□□□ 1.21
CCDC61-201ENST00000536603 USP48Q86UV5 1035 aa22.64■■□□□ 1.21
CCDC61-201ENST00000536603 ZBTB12Q9Y330 459 aaPredicted RBP22.64■■□□□ 1.21
CCDC61-201ENST00000536603 UTYO14607 1347 aa22.63■■□□□ 1.21
CCDC61-201ENST00000536603 ITGA6P23229 1130 aa22.63■■□□□ 1.21
CCDC61-201ENST00000536603 CCT4P50991 539 aaKnown RBP22.63■■□□□ 1.21
CCDC61-201ENST00000536603 EPHA10Q5JZY3 1008 aa22.63■■□□□ 1.21
CCDC61-201ENST00000536603 DBNDD1Q9H9R9 158 aa22.63■■□□□ 1.21
CCDC61-201ENST00000536603 RTL9Q8NET4 1388 aa22.63■■□□□ 1.21
CCDC61-201ENST00000536603 LRRC37AA6NMS7 1700 aa22.62■■□□□ 1.21
CCDC61-201ENST00000536603 PSMD14O00487 310 aa22.62■■□□□ 1.21
CCDC61-201ENST00000536603 GPSM2P81274 684 aa22.62■■□□□ 1.21
CCDC61-201ENST00000536603 LMBR1LQ6UX01 489 aa22.62■■□□□ 1.21
CCDC61-201ENST00000536603 SUCLG2Q96I99 432 aa22.62■■□□□ 1.21
CCDC61-201ENST00000536603 USP44Q9H0E7 712 aa22.62■■□□□ 1.21
CCDC61-201ENST00000536603 CHMP3Q9Y3E7 222 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms