RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 NBPF7P0C2Y1 421 aaPredicted RBP16.83■□□□□ 0.28
CAPN1-227ENST00000533909 FOXO4P98177 505 aa16.83■□□□□ 0.28
CAPN1-227ENST00000533909 GPC2Q8N158 579 aa16.83■□□□□ 0.28
CAPN1-227ENST00000533909 TBC1D16Q8TBP0 767 aa16.83■□□□□ 0.28
CAPN1-227ENST00000533909 ARHGAP45Q92619 1136 aa16.83■□□□□ 0.28
CAPN1-227ENST00000533909 KCNJ4P48050 445 aa16.82■□□□□ 0.28
CAPN1-227ENST00000533909 SUCLG2Q96I99 432 aa16.82■□□□□ 0.28
CAPN1-227ENST00000533909 ANKRD2Q9GZV1 360 aa16.82■□□□□ 0.28
CAPN1-227ENST00000533909 PODXL2Q9NZ53 605 aa16.82■□□□□ 0.28
CAPN1-227ENST00000533909 POLLQ9UGP5 575 aa16.82■□□□□ 0.28
CAPN1-227ENST00000533909 HDAC5Q9UQL6 1122 aa16.82■□□□□ 0.28
CAPN1-227ENST00000533909 COL4A1P02462 1669 aa16.81■□□□□ 0.28
CAPN1-227ENST00000533909 UTYO14607 1347 aa16.81■□□□□ 0.28
CAPN1-227ENST00000533909 BCAR3O75815 825 aa16.81■□□□□ 0.28
CAPN1-227ENST00000533909 UBTFL1P0CB47 393 aaPredicted RBP16.81■□□□□ 0.28
CAPN1-227ENST00000533909 ATP2B4P23634 1241 aa16.81■□□□□ 0.28
CAPN1-227ENST00000533909 LMOD1P29536 600 aaPredicted RBP16.81■□□□□ 0.28
CAPN1-227ENST00000533909 EPHA10Q5JZY3 1008 aa16.81■□□□□ 0.28
CAPN1-227ENST00000533909 MINPP1Q9UNW1 487 aa16.81■□□□□ 0.28
CAPN1-227ENST00000533909 TNIP1Q15025 636 aa16.8■□□□□ 0.28
CAPN1-227ENST00000533909 RBM46Q8TBY0 533 aaKnown RBP16.8■□□□□ 0.28
CAPN1-227ENST00000533909 GPR101Q96P66 508 aaPredicted RBP16.8■□□□□ 0.28
CAPN1-227ENST00000533909 USP44Q9H0E7 712 aa16.8■□□□□ 0.28
CAPN1-227ENST00000533909 BICC1Q9H694 974 aaKnown RBP16.8■□□□□ 0.28
CAPN1-227ENST00000533909 CNNM1Q9NRU3 951 aa16.8■□□□□ 0.28
CAPN1-227ENST00000533909 HACL1Q9UJ83 578 aa16.8■□□□□ 0.28
CAPN1-227ENST00000533909 RAD17O75943 681 aa16.79■□□□□ 0.28
CAPN1-227ENST00000533909 DOK7Q18PE1 504 aa16.79■□□□□ 0.28
CAPN1-227ENST00000533909 ZKSCAN2Q63HK3 967 aa16.79■□□□□ 0.28
CAPN1-227ENST00000533909 CIAPIN1Q6FI81 312 aa16.79■□□□□ 0.28
CAPN1-227ENST00000533909 ATF7IPQ6VMQ6 1270 aa16.79■□□□□ 0.28
CAPN1-227ENST00000533909 L3MBTL3Q96JM7 780 aaPredicted RBP16.79■□□□□ 0.28
CAPN1-227ENST00000533909 DBNDD1Q9H9R9 158 aa16.79■□□□□ 0.28
CAPN1-227ENST00000533909 DUOX1Q9NRD9 1551 aa16.79■□□□□ 0.28
CAPN1-227ENST00000533909 SPEF2Q9C093 1822 aa16.79■□□□□ 0.28
CAPN1-227ENST00000533909 WDR90Q96KV7 1748 aa16.79■□□□□ 0.28
CAPN1-227ENST00000533909 COL4A5P29400 1685 aa16.78■□□□□ 0.28
CAPN1-227ENST00000533909 LDHAL6AQ6ZMR3 332 aa16.78■□□□□ 0.28
CAPN1-227ENST00000533909 FTSJ3Q8IY81 847 aaKnown RBP16.78■□□□□ 0.28
CAPN1-227ENST00000533909 CLUAP1Q96AJ1 413 aa16.78■□□□□ 0.28
CAPN1-227ENST00000533909 ECE2O60344 883 aa16.77■□□□□ 0.28
CAPN1-227ENST00000533909 TRIM27P14373 513 aa16.77■□□□□ 0.28
CAPN1-227ENST00000533909 CXCL9Q07325 125 aa16.77■□□□□ 0.28
CAPN1-227ENST00000533909 EAPPQ56P03 285 aaPredicted RBP16.77■□□□□ 0.28
CAPN1-227ENST00000533909 SMC1BQ8NDV3 1235 aa16.77■□□□□ 0.28
CAPN1-227ENST00000533909 ZNF594Q96JF6 807 aaPredicted RBP16.77■□□□□ 0.28
CAPN1-227ENST00000533909 LEMD3Q9Y2U8 911 aa16.77■□□□□ 0.28
CAPN1-227ENST00000533909 PLIN1O60240 522 aa16.76■□□□□ 0.27
CAPN1-227ENST00000533909 GNAI3P08754 354 aa16.76■□□□□ 0.27
CAPN1-227ENST00000533909 EPHX2P34913 555 aa16.76■□□□□ 0.27
CAPN1-227ENST00000533909 CHRNDQ07001 517 aa16.76■□□□□ 0.27
CAPN1-227ENST00000533909 INTS3Q68E01 1043 aaKnown RBP16.76■□□□□ 0.27
CAPN1-227ENST00000533909 KAZALD1Q96I82 304 aa16.76■□□□□ 0.27
CAPN1-227ENST00000533909 CLEC11AQ9Y240 323 aa16.76■□□□□ 0.27
CAPN1-227ENST00000533909 ZNF804BA4D1E1 1349 aa16.75■□□□□ 0.27
CAPN1-227ENST00000533909 POTECB2RU33 542 aa16.75■□□□□ 0.27
CAPN1-227ENST00000533909 FSTL1Q12841 308 aa16.75■□□□□ 0.27
CAPN1-227ENST00000533909 PNMA8AQ86V59 439 aaPredicted RBP16.75■□□□□ 0.27
CAPN1-227ENST00000533909 TAF1DQ9H5J8 278 aaPredicted RBP16.75■□□□□ 0.27
CAPN1-227ENST00000533909 LTBP1Q14766 1721 aa16.75■□□□□ 0.27
CAPN1-227ENST00000533909 GMPSP49915 693 aaPredicted RBP16.74■□□□□ 0.27
CAPN1-227ENST00000533909 RABL6Q3YEC7 729 aaPredicted RBP16.74■□□□□ 0.27
CAPN1-227ENST00000533909 ANKRD44Q8N8A2 993 aa16.74■□□□□ 0.27
CAPN1-227ENST00000533909 HELBQ8NG08 1087 aaPredicted RBP16.74■□□□□ 0.27
CAPN1-227ENST00000533909 YTHDC1Q96MU7 727 aaKnown RBP16.74■□□□□ 0.27
CAPN1-227ENST00000533909 SCN4AP35499 1836 aa16.74■□□□□ 0.27
CAPN1-227ENST00000533909 MED23Q9ULK4 1368 aa16.74■□□□□ 0.27
CAPN1-227ENST00000533909 YDJCA8MPS7 323 aa16.73■□□□□ 0.27
CAPN1-227ENST00000533909 TAF5LO75529 589 aa16.73■□□□□ 0.27
CAPN1-227ENST00000533909 FBXW7Q969H0 707 aa16.73■□□□□ 0.27
CAPN1-227ENST00000533909 MEIS3Q99687 375 aa16.73■□□□□ 0.27
CAPN1-227ENST00000533909 LRRFIP2Q9Y608 721 aaKnown RBP16.73■□□□□ 0.27
CAPN1-227ENST00000533909 PSMD14O00487 310 aa16.72■□□□□ 0.27
CAPN1-227ENST00000533909 CHADLQ6NUI6 762 aa16.72■□□□□ 0.27
CAPN1-227ENST00000533909 PODNQ7Z5L7 613 aa16.72■□□□□ 0.27
CAPN1-227ENST00000533909 LDHDQ86WU2 507 aa16.72■□□□□ 0.27
CAPN1-227ENST00000533909 DZIP1LQ8IYY4 767 aaKnown RBP16.72■□□□□ 0.27
CAPN1-227ENST00000533909 MROH5Q6ZUA9 1318 aa16.71■□□□□ 0.27
CAPN1-227ENST00000533909 MS4A1P11836 297 aa16.71■□□□□ 0.27
CAPN1-227ENST00000533909 HSPA6P17066 643 aa16.71■□□□□ 0.27
CAPN1-227ENST00000533909 SCNN1DP51172 638 aa16.71■□□□□ 0.27
CAPN1-227ENST00000533909 METTL24Q5JXM2 366 aa16.71■□□□□ 0.27
CAPN1-227ENST00000533909 ITPRIPQ8IWB1 547 aa16.71■□□□□ 0.27
CAPN1-227ENST00000533909 TMEM57Q8N5G2 664 aa16.71■□□□□ 0.27
CAPN1-227ENST00000533909 COA1Q9GZY4 146 aa16.71■□□□□ 0.27
CAPN1-227ENST00000533909 GPRC5DQ9NZD1 345 aa16.71■□□□□ 0.27
CAPN1-227ENST00000533909 TNNQ9UQP3 1299 aa16.71■□□□□ 0.27
CAPN1-227ENST00000533909 WTIPA6NIX2 430 aaPredicted RBP16.7■□□□□ 0.26
CAPN1-227ENST00000533909 H7C1D1 291 aa16.7■□□□□ 0.26
CAPN1-227ENST00000533909 RPS12P25398 132 aaKnown RBP16.7■□□□□ 0.26
CAPN1-227ENST00000533909 EPS15P42566 896 aa16.7■□□□□ 0.26
CAPN1-227ENST00000533909 ZNF804AQ7Z570 1209 aa16.7■□□□□ 0.26
CAPN1-227ENST00000533909 PUS3Q9BZE2 481 aaKnown RBP16.7■□□□□ 0.26
CAPN1-227ENST00000533909 KCNQ5Q9NR82 932 aa16.7■□□□□ 0.26
CAPN1-227ENST00000533909 ADARB2Q9NS39 739 aaKnown RBP16.7■□□□□ 0.26
CAPN1-227ENST00000533909 RCAN3Q9UKA8 241 aa16.7■□□□□ 0.26
CAPN1-227ENST00000533909 USP17L3A6NCW0 530 aa16.69■□□□□ 0.26
CAPN1-227ENST00000533909 USP17L4A6NCW7 530 aa16.69■□□□□ 0.26
CAPN1-227ENST00000533909 GNAI2P04899 355 aa16.69■□□□□ 0.26
CAPN1-227ENST00000533909 USP50Q70EL3 339 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 180.6 ms