RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 GPR162Q16538 588 aa13.07□□□□□ -0.32
AMBRA1-211ENST00000533727 C8orf76Q96K31 380 aa13.07□□□□□ -0.32
AMBRA1-211ENST00000533727 ADGRB3O60242 1522 aa13.07□□□□□ -0.32
AMBRA1-211ENST00000533727 FIBPO43427 364 aa13.07□□□□□ -0.32
AMBRA1-211ENST00000533727 CALM1P0DP23 149 aa13.07□□□□□ -0.32
AMBRA1-211ENST00000533727 CALM2P0DP24 149 aa13.07□□□□□ -0.32
AMBRA1-211ENST00000533727 CALM3P0DP25 149 aa13.07□□□□□ -0.32
AMBRA1-211ENST00000533727 DPY19L2Q6NUT2 758 aa13.07□□□□□ -0.32
AMBRA1-211ENST00000533727 CCDC148Q8NFR7 591 aa13.07□□□□□ -0.32
AMBRA1-211ENST00000533727 SLC9C2Q5TAH2 1124 aa13.06□□□□□ -0.32
AMBRA1-211ENST00000533727 TRIM5Q9C035 493 aa13.06□□□□□ -0.32
AMBRA1-211ENST00000533727 PDCL3Q9H2J4 239 aa13.06□□□□□ -0.32
AMBRA1-211ENST00000533727 RIMBP2O15034 1052 aa13.06□□□□□ -0.32
AMBRA1-211ENST00000533727 AGLP35573 1532 aa13.06□□□□□ -0.32
AMBRA1-211ENST00000533727 IQGAP3Q86VI3 1631 aa13.06□□□□□ -0.32
AMBRA1-211ENST00000533727 MCMDC2Q4G0Z9 681 aa13.06□□□□□ -0.32
AMBRA1-211ENST00000533727 ZNF496Q96IT1 587 aaPredicted RBP13.06□□□□□ -0.32
AMBRA1-211ENST00000533727 PAG1Q9NWQ8 432 aa13.06□□□□□ -0.32
AMBRA1-211ENST00000533727 GJA3Q9Y6H8 435 aa13.06□□□□□ -0.32
AMBRA1-211ENST00000533727 CDC42BPAQ5VT25 1732 aa13.06□□□□□ -0.32
AMBRA1-211ENST00000533727 GLI2P10070 1586 aa13.06□□□□□ -0.32
AMBRA1-211ENST00000533727 RBM6P78332 1123 aaKnown RBP13.06□□□□□ -0.32
AMBRA1-211ENST00000533727 WTAPQ15007 396 aa13.06□□□□□ -0.32
AMBRA1-211ENST00000533727 ZNHIT6Q9NWK9 470 aaKnown RBP13.06□□□□□ -0.32
AMBRA1-211ENST00000533727 MROH5Q6ZUA9 1318 aa13.05□□□□□ -0.32
AMBRA1-211ENST00000533727 IARSP41252 1262 aaKnown RBP13.05□□□□□ -0.32
AMBRA1-211ENST00000533727 CWF19L2Q2TBE0 894 aaKnown RBP13.05□□□□□ -0.32
AMBRA1-211ENST00000533727 SPATA32Q96LK8 384 aa13.05□□□□□ -0.32
AMBRA1-211ENST00000533727 LOC102724428A0A0B4J2F2 783 aa13.05□□□□□ -0.32
AMBRA1-211ENST00000533727 ITGA6P23229 1130 aa13.05□□□□□ -0.32
AMBRA1-211ENST00000533727 MATR3P43243 847 aaKnown RBP eCLIP13.05□□□□□ -0.329e-7■■■■□ 20.5
AMBRA1-211ENST00000533727 SIK1P57059 783 aa13.05□□□□□ -0.32
AMBRA1-211ENST00000533727 TTC22Q5TAA0 569 aa13.05□□□□□ -0.32
AMBRA1-211ENST00000533727 PIBF1Q8WXW3 757 aa13.05□□□□□ -0.32
AMBRA1-211ENST00000533727 BEGAINQ9BUH8 593 aa13.05□□□□□ -0.32
AMBRA1-211ENST00000533727 SPATA31A6Q5VVP1 1343 aa13.05□□□□□ -0.32
AMBRA1-211ENST00000533727 PRPF40AO75400 957 aaKnown RBP13.05□□□□□ -0.32
AMBRA1-211ENST00000533727 LGR6Q9HBX8 967 aa13.05□□□□□ -0.32
AMBRA1-211ENST00000533727 STX8Q9UNK0 236 aa13.05□□□□□ -0.32
AMBRA1-211ENST00000533727 LIMCH1Q9UPQ0 1083 aa13.05□□□□□ -0.32
AMBRA1-211ENST00000533727 SEPT12Q8IYM1 358 aa13.05□□□□□ -0.32
AMBRA1-211ENST00000533727 MPNDQ8N594 471 aa13.05□□□□□ -0.32
AMBRA1-211ENST00000533727 NEK1Q96PY6 1258 aa13.05□□□□□ -0.32
AMBRA1-211ENST00000533727 RAD50Q92878 1312 aa13.04□□□□□ -0.32
AMBRA1-211ENST00000533727 A1BGP04217 495 aa13.04□□□□□ -0.32
AMBRA1-211ENST00000533727 NAP1L1P55209 391 aaKnown RBP13.04□□□□□ -0.32
AMBRA1-211ENST00000533727 TCIRG1Q13488 830 aa13.04□□□□□ -0.32
AMBRA1-211ENST00000533727 LRRC27Q9C0I9 530 aa13.04□□□□□ -0.32
AMBRA1-211ENST00000533727 PLA2R1Q13018 1463 aa13.04□□□□□ -0.32
AMBRA1-211ENST00000533727 EIF4A1P60842 406 aaKnown RBP13.04□□□□□ -0.32
AMBRA1-211ENST00000533727 RBM26Q5T8P6 1007 aaKnown RBP13.04□□□□□ -0.32
AMBRA1-211ENST00000533727 STXBP4Q6ZWJ1 553 aa13.04□□□□□ -0.32
AMBRA1-211ENST00000533727 ZSCAN30Q86W11 494 aa13.04□□□□□ -0.32
AMBRA1-211ENST00000533727 FAM89AQ96GI7 184 aa13.04□□□□□ -0.32
AMBRA1-211ENST00000533727 H7C1D1 291 aa13.04□□□□□ -0.32
AMBRA1-211ENST00000533727 RNF113AO15541 343 aaKnown RBP13.04□□□□□ -0.32
AMBRA1-211ENST00000533727 MCM4P33991 863 aa13.04□□□□□ -0.32
AMBRA1-211ENST00000533727 PICALMQ13492 652 aa13.04□□□□□ -0.32
AMBRA1-211ENST00000533727 CCDC112Q8NEF3 446 aa13.04□□□□□ -0.32
AMBRA1-211ENST00000533727 RTL9Q8NET4 1388 aa13.04□□□□□ -0.32
AMBRA1-211ENST00000533727 BMP15O95972 392 aa13.04□□□□□ -0.32
AMBRA1-211ENST00000533727 CEBPZQ03701 1054 aaKnown RBP13.03□□□□□ -0.32
AMBRA1-211ENST00000533727 TNFAIP1Q13829 316 aa13.03□□□□□ -0.32
AMBRA1-211ENST00000533727 ZFYVE27Q5T4F4 411 aa13.03□□□□□ -0.32
AMBRA1-211ENST00000533727 PICK1Q9NRD5 415 aa13.03□□□□□ -0.32
AMBRA1-211ENST00000533727 BLMP54132 1417 aaPredicted RBP13.03□□□□□ -0.32
AMBRA1-211ENST00000533727 CDC42BPGQ6DT37 1551 aa13.03□□□□□ -0.32
AMBRA1-211ENST00000533727 NBPF7P0C2Y1 421 aaPredicted RBP13.03□□□□□ -0.32
AMBRA1-211ENST00000533727 IL6STP40189 918 aaPredicted RBP13.03□□□□□ -0.32
AMBRA1-211ENST00000533727 ERBB3P21860 1342 aa13.03□□□□□ -0.32
AMBRA1-211ENST00000533727 METAP2P50579 478 aaKnown RBP eCLIP13.03□□□□□ -0.32
AMBRA1-211ENST00000533727 IQSEC3Q9UPP2 1182 aaPredicted RBP13.03□□□□□ -0.32
AMBRA1-211ENST00000533727 IFIT1BQ5T764 474 aaKnown RBP13.02□□□□□ -0.32
AMBRA1-211ENST00000533727 CCP110O43303 1012 aa13.02□□□□□ -0.32
AMBRA1-211ENST00000533727 LPIN2Q92539 896 aa13.02□□□□□ -0.32
AMBRA1-211ENST00000533727 SCAND2PQ9GZW5 306 aaPredicted RBP13.02□□□□□ -0.32
AMBRA1-211ENST00000533727 AFF2P51816 1311 aa13.02□□□□□ -0.32
AMBRA1-211ENST00000533727 FGFR1OPO95684 399 aaKnown RBP13.02□□□□□ -0.33
AMBRA1-211ENST00000533727 HCLS1P14317 486 aaPredicted RBP13.02□□□□□ -0.33
AMBRA1-211ENST00000533727 ATP2B4P23634 1241 aa13.02□□□□□ -0.33
AMBRA1-211ENST00000533727 ERMNQ8TAM6 284 aa13.02□□□□□ -0.33
AMBRA1-211ENST00000533727 POTEJP0CG39 1038 aa13.02□□□□□ -0.33
AMBRA1-211ENST00000533727 CCDC192P0DO97 292 aa13.02□□□□□ -0.33
AMBRA1-211ENST00000533727 NUCB1Q02818 461 aa13.02□□□□□ -0.33
AMBRA1-211ENST00000533727 C2CD5Q86YS7 1000 aa13.02□□□□□ -0.33
AMBRA1-211ENST00000533727 PAF1Q8N7H5 531 aa13.02□□□□□ -0.33
AMBRA1-211ENST00000533727 BICC1Q9H694 974 aaKnown RBP13.02□□□□□ -0.33
AMBRA1-211ENST00000533727 USP16Q9Y5T5 823 aa13.02□□□□□ -0.33
AMBRA1-211ENST00000533727 CBFA2T2O43439 604 aa13.01□□□□□ -0.33
AMBRA1-211ENST00000533727 TCP11L1Q9NUJ3 509 aa13.01□□□□□ -0.33
AMBRA1-211ENST00000533727 TNS3Q68CZ2 1445 aa13.01□□□□□ -0.33
AMBRA1-211ENST00000533727 TRIM37O94972 964 aa13.01□□□□□ -0.33
AMBRA1-211ENST00000533727 PDE1AP54750 535 aa13.01□□□□□ -0.33
AMBRA1-211ENST00000533727 RPS8P62241 208 aaKnown RBP13.01□□□□□ -0.33
AMBRA1-211ENST00000533727 CC2D2BQ6DHV5 1058 aa13.01□□□□□ -0.33
AMBRA1-211ENST00000533727 TEX11Q8IYF3 940 aa13.01□□□□□ -0.33
AMBRA1-211ENST00000533727 TNMDQ9H2S6 317 aa13.01□□□□□ -0.33
AMBRA1-211ENST00000533727 MCM9Q9NXL9 1143 aa13.01□□□□□ -0.33
AMBRA1-211ENST00000533727 TMOD4Q9NZQ9 345 aa13.01□□□□□ -0.33
AMBRA1-211ENST00000533727 IGSF1Q8N6C5 1336 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms