RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 GNAT2P19087 354 aa7.32□□□□□ -1.24
UBQLN1-206ENST00000533705 PAFAH1B1P43034 410 aa7.32□□□□□ -1.24
UBQLN1-206ENST00000533705 ANKRD44Q8N8A2 993 aa7.32□□□□□ -1.24
UBQLN1-206ENST00000533705 CCDC102AQ96A19 550 aa7.32□□□□□ -1.24
UBQLN1-206ENST00000533705 EYA1Q99502 592 aa7.32□□□□□ -1.24
UBQLN1-206ENST00000533705 ALG1Q9BT22 464 aa7.32□□□□□ -1.24
UBQLN1-206ENST00000533705 GBP3Q9H0R5 595 aa7.32□□□□□ -1.24
UBQLN1-206ENST00000533705 EXOC1Q9NV70 894 aa7.32□□□□□ -1.24
UBQLN1-206ENST00000533705 BRPF3Q9ULD4 1205 aa7.32□□□□□ -1.24
UBQLN1-206ENST00000533705 COMMD10Q9Y6G5 202 aa7.32□□□□□ -1.24
UBQLN1-206ENST00000533705 MAP3K5Q99683 1374 aa7.32□□□□□ -1.24
UBQLN1-206ENST00000533705 PTPN14Q15678 1187 aa7.32□□□□□ -1.24
UBQLN1-206ENST00000533705 CWF19L2Q2TBE0 894 aaKnown RBP7.32□□□□□ -1.24
UBQLN1-206ENST00000533705 USP37Q86T82 979 aa7.32□□□□□ -1.24
UBQLN1-206ENST00000533705 PLCD3Q8N3E9 789 aa7.32□□□□□ -1.24
UBQLN1-206ENST00000533705 IP6K1Q92551 441 aa7.32□□□□□ -1.24
UBQLN1-206ENST00000533705 ZSCAN16Q9H4T2 348 aaPredicted RBP7.32□□□□□ -1.24
UBQLN1-206ENST00000533705 PAG1Q9NWQ8 432 aa7.32□□□□□ -1.24
UBQLN1-206ENST00000533705 TRPM2O94759 1503 aa7.32□□□□□ -1.24
UBQLN1-206ENST00000533705 PHACTR2O75167 634 aa7.32□□□□□ -1.24
UBQLN1-206ENST00000533705 APBA3O96018 575 aa7.32□□□□□ -1.24
UBQLN1-206ENST00000533705 CALM1P0DP23 149 aa7.32□□□□□ -1.24
UBQLN1-206ENST00000533705 CALM2P0DP24 149 aa7.32□□□□□ -1.24
UBQLN1-206ENST00000533705 CALM3P0DP25 149 aa7.32□□□□□ -1.24
UBQLN1-206ENST00000533705 PDE1AP54750 535 aa7.32□□□□□ -1.24
UBQLN1-206ENST00000533705 PUS7Q96PZ0 661 aaKnown RBP7.32□□□□□ -1.24
UBQLN1-206ENST00000533705 ORAI2Q96SN7 254 aa7.32□□□□□ -1.24
UBQLN1-206ENST00000533705 CRACR2AQ9BSW2 395 aa7.32□□□□□ -1.24
UBQLN1-206ENST00000533705 USP21Q9UK80 565 aa7.32□□□□□ -1.24
UBQLN1-206ENST00000533705 RBM8AQ9Y5S9 174 aaKnown RBP7.32□□□□□ -1.24
UBQLN1-206ENST00000533705 TRAPPC8Q9Y2L5 1435 aa7.32□□□□□ -1.24
UBQLN1-206ENST00000533705 SBNO2Q9Y2G9 1366 aa7.32□□□□□ -1.24
UBQLN1-206ENST00000533705 SYCP2Q9BX26 1530 aa7.32□□□□□ -1.24
UBQLN1-206ENST00000533705 MRPL50Q8N5N7 158 aaKnown RBP7.32□□□□□ -1.24
UBQLN1-206ENST00000533705 C6orf50Q9HD87 102 aa7.32□□□□□ -1.24
UBQLN1-206ENST00000533705 CLIP2Q9UDT6 1046 aa7.32□□□□□ -1.24
UBQLN1-206ENST00000533705 SPDYE3A6NKU9 549 aa7.31□□□□□ -1.24
UBQLN1-206ENST00000533705 UFL1O94874 794 aa7.31□□□□□ -1.24
UBQLN1-206ENST00000533705 SDSP20132 328 aa7.31□□□□□ -1.24
UBQLN1-206ENST00000533705 HOXC9P31274 260 aa7.31□□□□□ -1.24
UBQLN1-206ENST00000533705 NCBP1Q09161 790 aaKnown RBP7.31□□□□□ -1.24
UBQLN1-206ENST00000533705 NUP160Q12769 1436 aa7.31□□□□□ -1.24
UBQLN1-206ENST00000533705 HDAC1Q13547 482 aaPredicted RBP7.31□□□□□ -1.24
UBQLN1-206ENST00000533705 STX1AQ16623 288 aa7.31□□□□□ -1.24
UBQLN1-206ENST00000533705 MAGEB6Q8N7X4 407 aa7.31□□□□□ -1.24
UBQLN1-206ENST00000533705 IL27Q8NEV9 243 aa7.31□□□□□ -1.24
UBQLN1-206ENST00000533705 BEGAINQ9BUH8 593 aa7.31□□□□□ -1.24
UBQLN1-206ENST00000533705 GDPD2Q9HCC8 539 aa7.31□□□□□ -1.24
UBQLN1-206ENST00000533705 RMND1Q9NWS8 449 aa7.31□□□□□ -1.24
UBQLN1-206ENST00000533705 RAPGEF6Q8TEU7 1601 aa7.31□□□□□ -1.24
UBQLN1-206ENST00000533705 CCDC66A2RUB6 948 aa7.31□□□□□ -1.24
UBQLN1-206ENST00000533705 RNMTO43148 476 aaKnown RBP7.31□□□□□ -1.24
UBQLN1-206ENST00000533705 ISM2Q6H9L7 571 aa7.31□□□□□ -1.24
UBQLN1-206ENST00000533705 CCDC91Q7Z6B0 441 aa7.31□□□□□ -1.24
UBQLN1-206ENST00000533705 TRIM47Q96LD4 638 aa7.31□□□□□ -1.24
UBQLN1-206ENST00000533705 PSMD1Q99460 953 aa7.31□□□□□ -1.24
UBQLN1-206ENST00000533705 WDR70Q9NW82 654 aa7.31□□□□□ -1.24
UBQLN1-206ENST00000533705 RBM27Q9P2N5 1060 aaKnown RBP7.31□□□□□ -1.24
UBQLN1-206ENST00000533705 TCEANC2Q96MN5 208 aa7.31□□□□□ -1.24
UBQLN1-206ENST00000533705 TBC1D2Q9BYX2 928 aa7.31□□□□□ -1.24
UBQLN1-206ENST00000533705 TMCO5BA8MYB1 307 aa7.31□□□□□ -1.24
UBQLN1-206ENST00000533705 BAG6P46379 1132 aa7.31□□□□□ -1.24
UBQLN1-206ENST00000533705 NUCB1Q02818 461 aa7.31□□□□□ -1.24
UBQLN1-206ENST00000533705 UHRF1BP1Q6BDS2 1440 aa7.31□□□□□ -1.24
UBQLN1-206ENST00000533705 ASXL1Q8IXJ9 1541 aa7.31□□□□□ -1.24
UBQLN1-206ENST00000533705 H0YIN7 160 aa7.31□□□□□ -1.24
UBQLN1-206ENST00000533705 EIF6P56537 245 aaKnown RBP7.31□□□□□ -1.24
UBQLN1-206ENST00000533705 SP4Q02446 784 aa7.31□□□□□ -1.24
UBQLN1-206ENST00000533705 CCDC113Q9H0I3 377 aa7.31□□□□□ -1.24
UBQLN1-206ENST00000533705 SYNCQ9H7C4 482 aa7.31□□□□□ -1.24
UBQLN1-206ENST00000533705 RNF113AO15541 343 aaKnown RBP7.3□□□□□ -1.24
UBQLN1-206ENST00000533705 URI1O94763 535 aaPredicted RBP7.3□□□□□ -1.24
UBQLN1-206ENST00000533705 CASQ1P31415 396 aa7.3□□□□□ -1.24
UBQLN1-206ENST00000533705 STAT6P42226 847 aa7.3□□□□□ -1.24
UBQLN1-206ENST00000533705 LARGE2Q8N3Y3 721 aa7.3□□□□□ -1.24
UBQLN1-206ENST00000533705 NECAB1Q8N987 351 aa7.3□□□□□ -1.24
UBQLN1-206ENST00000533705 DYDC1Q8WWB3 177 aa7.3□□□□□ -1.24
UBQLN1-206ENST00000533705 FAM89AQ96GI7 184 aa7.3□□□□□ -1.24
UBQLN1-206ENST00000533705 ALS2CR12Q96Q35 445 aa7.3□□□□□ -1.24
UBQLN1-206ENST00000533705 FERMT1Q9BQL6 677 aa7.3□□□□□ -1.24
UBQLN1-206ENST00000533705 CCDC172P0C7W6 258 aa7.3□□□□□ -1.24
UBQLN1-206ENST00000533705 SYKP43405 635 aa7.3□□□□□ -1.24
UBQLN1-206ENST00000533705 PRIM1P49642 420 aaKnown RBP7.3□□□□□ -1.24
UBQLN1-206ENST00000533705 TTC6Q86TZ1 520 aa7.3□□□□□ -1.24
UBQLN1-206ENST00000533705 RRP36Q96EU6 259 aaKnown RBP7.3□□□□□ -1.24
UBQLN1-206ENST00000533705 PICK1Q9NRD5 415 aa7.3□□□□□ -1.24
UBQLN1-206ENST00000533705 MAP3K19Q56UN5 1328 aa7.3□□□□□ -1.24
UBQLN1-206ENST00000533705 KRT13P13646 458 aa7.3□□□□□ -1.24
UBQLN1-206ENST00000533705 HCLS1P14317 486 aaPredicted RBP7.3□□□□□ -1.24
UBQLN1-206ENST00000533705 NOP2P46087 812 aaKnown RBP7.3□□□□□ -1.24
UBQLN1-206ENST00000533705 RAB3GAP1Q15042 981 aa7.3□□□□□ -1.24
UBQLN1-206ENST00000533705 PARP10Q53GL7 1025 aa7.3□□□□□ -1.24
UBQLN1-206ENST00000533705 ZNF354CQ86Y25 554 aa7.3□□□□□ -1.24
UBQLN1-206ENST00000533705 KIF18AQ8NI77 898 aa7.3□□□□□ -1.24
UBQLN1-206ENST00000533705 TNPO1Q92973 898 aaKnown RBP7.3□□□□□ -1.24
UBQLN1-206ENST00000533705 IGHDP01880 384 aa7.3□□□□□ -1.24
UBQLN1-206ENST00000533705 RBM10P98175 930 aaKnown RBP7.3□□□□□ -1.24
UBQLN1-206ENST00000533705 ZBTB21Q9ULJ3 1066 aa7.3□□□□□ -1.24
UBQLN1-206ENST00000533705 RTL9Q8NET4 1388 aa7.3□□□□□ -1.24
UBQLN1-206ENST00000533705 CALML3P27482 149 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms