RNA–Protein interactions for RNA: ENST00000533411.5

SOX6-215, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-215ENST00000533411 BEND3Q5T5X7 828 aa8.67□□□□□ -1.02
SOX6-215ENST00000533411 ERICH6Q7L0X2 663 aa8.67□□□□□ -1.02
SOX6-215ENST00000533411 NLRP10Q86W26 655 aa8.67□□□□□ -1.02
SOX6-215ENST00000533411 RPGRQ92834 1020 aaKnown RBP8.67□□□□□ -1.02
SOX6-215ENST00000533411 DCBLD2Q96PD2 775 aa8.67□□□□□ -1.02
SOX6-215ENST00000533411 UTP14AQ9BVJ6 771 aaKnown RBP8.67□□□□□ -1.02
SOX6-215ENST00000533411 TAOK3Q9H2K8 898 aa8.67□□□□□ -1.02
SOX6-215ENST00000533411 RRAGCQ9HB90 399 aa8.67□□□□□ -1.02
SOX6-215ENST00000533411 LTBP3Q9NS15 1303 aa8.66□□□□□ -1.02
SOX6-215ENST00000533411 ATP5J2-PTCD1G3V325 749 aa8.66□□□□□ -1.02
SOX6-215ENST00000533411 HCLS1P14317 486 aaPredicted RBP8.66□□□□□ -1.02
SOX6-215ENST00000533411 CCDC93Q567U6 631 aa8.66□□□□□ -1.02
SOX6-215ENST00000533411 BMP2KLQ5H9B9 411 aa8.66□□□□□ -1.02
SOX6-215ENST00000533411 ANKRD13DQ6ZTN6 518 aa8.66□□□□□ -1.02
SOX6-215ENST00000533411 RIC3Q7Z5B4 369 aa8.66□□□□□ -1.02
SOX6-215ENST00000533411 LINS1Q8NG48 757 aa8.66□□□□□ -1.02
SOX6-215ENST00000533411 PLBD2Q8NHP8 589 aa8.66□□□□□ -1.02
SOX6-215ENST00000533411 TRMT112Q9UI30 125 aaKnown RBP8.66□□□□□ -1.02
SOX6-215ENST00000533411 COL4A1P02462 1669 aa8.65□□□□□ -1.02
SOX6-215ENST00000533411 SNED1Q8TER0 1413 aa8.65□□□□□ -1.02
SOX6-215ENST00000533411 ZC3H4Q9UPT8 1303 aaKnown RBP8.65□□□□□ -1.02
SOX6-215ENST00000533411 GLTPD2A6NH11 291 aa8.65□□□□□ -1.02
SOX6-215ENST00000533411 EIF5BO60841 1220 aaKnown RBP8.65□□□□□ -1.02
SOX6-215ENST00000533411 ALDH1B1P30837 517 aa8.65□□□□□ -1.02
SOX6-215ENST00000533411 HOXA10P31260 410 aaPredicted RBP8.65□□□□□ -1.02
SOX6-215ENST00000533411 HSP90AB3PQ58FF7 597 aa8.65□□□□□ -1.02
SOX6-215ENST00000533411 SOGA3Q5TF21 947 aa8.65□□□□□ -1.02
SOX6-215ENST00000533411 IPO9Q96P70 1041 aaKnown RBP8.65□□□□□ -1.02
SOX6-215ENST00000533411 USP44Q9H0E7 712 aa8.65□□□□□ -1.02
SOX6-215ENST00000533411 ZNF277Q9NRM2 450 aaPredicted RBP8.65□□□□□ -1.02
SOX6-215ENST00000533411 C9orf78Q9NZ63 289 aaPredicted RBP8.65□□□□□ -1.02
SOX6-215ENST00000533411 WDR90Q96KV7 1748 aa8.65□□□□□ -1.03
SOX6-215ENST00000533411 COL4A5P29400 1685 aa8.65□□□□□ -1.03
SOX6-215ENST00000533411 GRM8O00222 908 aa8.64□□□□□ -1.03
SOX6-215ENST00000533411 PPEF1O14829 653 aaPredicted RBP8.64□□□□□ -1.03
SOX6-215ENST00000533411 ATP8B2P98198 1209 aa8.64□□□□□ -1.03
SOX6-215ENST00000533411 FKBP4Q02790 459 aaKnown RBP eCLIP8.64□□□□□ -1.03
SOX6-215ENST00000533411 RTL5Q5HYW3 569 aaPredicted RBP8.64□□□□□ -1.03
SOX6-215ENST00000533411 SLC10A5Q5PT55 438 aa8.64□□□□□ -1.03
SOX6-215ENST00000533411 FAM89AQ96GI7 184 aa8.64□□□□□ -1.03
SOX6-215ENST00000533411 RBM17Q96I25 401 aaKnown RBP8.64□□□□□ -1.03
SOX6-215ENST00000533411 NLRP3Q96P20 1036 aa8.64□□□□□ -1.03
SOX6-215ENST00000533411 CRAMP1Q96RY5 1269 aa8.64□□□□□ -1.03
SOX6-215ENST00000533411 ISCA1Q9BUE6 129 aa8.64□□□□□ -1.03
SOX6-215ENST00000533411 PLSCR2Q9NRY7 297 aa8.64□□□□□ -1.03
SOX6-215ENST00000533411 SH3TC1Q8TE82 1336 aa8.63□□□□□ -1.03
SOX6-215ENST00000533411 ZNF541Q9H0D2 1346 aa8.63□□□□□ -1.03
SOX6-215ENST00000533411 MYH3P11055 1940 aa8.63□□□□□ -1.03
SOX6-215ENST00000533411 PNMA6EA0A0J9YXQ4 647 aa8.63□□□□□ -1.03
SOX6-215ENST00000533411 POTECB2RU33 542 aa8.63□□□□□ -1.03
SOX6-215ENST00000533411 APBB1O00213 710 aa8.63□□□□□ -1.03
SOX6-215ENST00000533411 TOMM70O94826 608 aa8.63□□□□□ -1.03
SOX6-215ENST00000533411 DDNO94850 711 aaPredicted RBP8.63□□□□□ -1.03
SOX6-215ENST00000533411 POTEIP0CG38 1075 aa8.63□□□□□ -1.03
SOX6-215ENST00000533411 HSPA6P17066 643 aa8.63□□□□□ -1.03
SOX6-215ENST00000533411 HSP90AB4PQ58FF6 505 aa8.63□□□□□ -1.03
SOX6-215ENST00000533411 C16orf71Q8IYS4 520 aaPredicted RBP8.63□□□□□ -1.03
SOX6-215ENST00000533411 RTKN2Q8IZC4 609 aa8.63□□□□□ -1.03
SOX6-215ENST00000533411 MYD88Q99836 296 aa8.63□□□□□ -1.03
SOX6-215ENST00000533411 METTL22Q9BUU2 404 aaPredicted RBP8.63□□□□□ -1.03
SOX6-215ENST00000533411 LRRCC1Q9C099 1032 aa8.63□□□□□ -1.03
SOX6-215ENST00000533411 NOP58Q9Y2X3 529 aaKnown RBP8.63□□□□□ -1.03
SOX6-215ENST00000533411 UTYO14607 1347 aa8.62□□□□□ -1.03
SOX6-215ENST00000533411 AOX1Q06278 1338 aa8.62□□□□□ -1.03
SOX6-215ENST00000533411 NEURL1BA8MQ27 555 aa8.62□□□□□ -1.03
SOX6-215ENST00000533411 SRGAP3O43295 1099 aa8.62□□□□□ -1.03
SOX6-215ENST00000533411 RAB11FIP3O75154 756 aa8.62□□□□□ -1.03
SOX6-215ENST00000533411 CDC45O75419 566 aa8.62□□□□□ -1.03
SOX6-215ENST00000533411 NBPF7P0C2Y1 421 aaPredicted RBP8.62□□□□□ -1.03
SOX6-215ENST00000533411 IARSP41252 1262 aaKnown RBP8.62□□□□□ -1.03
SOX6-215ENST00000533411 MTX1Q13505 466 aa8.62□□□□□ -1.03
SOX6-215ENST00000533411 CWF19L2Q2TBE0 894 aaKnown RBP8.62□□□□□ -1.03
SOX6-215ENST00000533411 TTC22Q5TAA0 569 aa8.62□□□□□ -1.03
SOX6-215ENST00000533411 RBM46Q8TBY0 533 aaKnown RBP8.62□□□□□ -1.03
SOX6-215ENST00000533411 SSH3Q8TE77 659 aa8.62□□□□□ -1.03
SOX6-215ENST00000533411 JARID2Q92833 1246 aaPredicted RBP8.62□□□□□ -1.03
SOX6-215ENST00000533411 EXOC6BQ9Y2D4 811 aa8.62□□□□□ -1.03
SOX6-215ENST00000533411 LRRC37AA6NMS7 1700 aa8.61□□□□□ -1.03
SOX6-215ENST00000533411 SMARCA5O60264 1052 aaPredicted RBP8.61□□□□□ -1.03
SOX6-215ENST00000533411 VEGFAP15692 232 aaPredicted RBP8.61□□□□□ -1.03
SOX6-215ENST00000533411 OS9Q13438 667 aaPredicted RBP8.61□□□□□ -1.03
SOX6-215ENST00000533411 DPY19L2Q6NUT2 758 aa8.61□□□□□ -1.03
SOX6-215ENST00000533411 CASC1Q6TDU7 716 aa8.61□□□□□ -1.03
SOX6-215ENST00000533411 ERC1Q8IUD2 1116 aa8.61□□□□□ -1.03
SOX6-215ENST00000533411 PLEKHM2Q8IWE5 1019 aa8.61□□□□□ -1.03
SOX6-215ENST00000533411 PSMD1Q99460 953 aa8.61□□□□□ -1.03
SOX6-215ENST00000533411 SPEF2Q9C093 1822 aa8.61□□□□□ -1.03
SOX6-215ENST00000533411 IRS4O14654 1257 aaPredicted RBP8.6□□□□□ -1.03
SOX6-215ENST00000533411 SURF6O75683 361 aaKnown RBP8.6□□□□□ -1.03
SOX6-215ENST00000533411 IGKV5-2P06315 115 aa8.6□□□□□ -1.03
SOX6-215ENST00000533411 POTEJP0CG39 1038 aa8.6□□□□□ -1.03
SOX6-215ENST00000533411 MX1P20591 662 aa8.6□□□□□ -1.03
SOX6-215ENST00000533411 MFAP1P55081 439 aaKnown RBP8.6□□□□□ -1.03
SOX6-215ENST00000533411 HTRA3P83110 453 aa8.6□□□□□ -1.03
SOX6-215ENST00000533411 TRIM28Q13263 835 aaKnown RBP8.6□□□□□ -1.03
SOX6-215ENST00000533411 GRAPQ13588 217 aa8.6□□□□□ -1.03
SOX6-215ENST00000533411 GCKRQ14397 625 aa8.6□□□□□ -1.03
SOX6-215ENST00000533411 CC2D2BQ6DHV5 1058 aa8.6□□□□□ -1.03
SOX6-215ENST00000533411 DDX46Q7L014 1031 aaKnown RBP8.6□□□□□ -1.03
SOX6-215ENST00000533411 GRAPLQ8TC17 118 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms