RNA–Protein interactions for RNA: ENST00000532465.1

LMNB2-205, Transcript of lamin B2, humanhuman

TSL 3

Gene LMNB2, Length 769 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-205ENST00000532465 KLRG1Q96E93 195 aa23.77■■□□□ 1.4
LMNB2-205ENST00000532465 GPRC5DQ9NZD1 345 aa23.77■■□□□ 1.4
LMNB2-205ENST00000532465 GGA1Q9UJY5 639 aa23.77■■□□□ 1.4
LMNB2-205ENST00000532465 SPEF2Q9C093 1822 aa23.77■■□□□ 1.4
LMNB2-205ENST00000532465 TNIP1Q15025 636 aa23.76■■□□□ 1.39
LMNB2-205ENST00000532465 FAM161AQ3B820 660 aa23.76■■□□□ 1.39
LMNB2-205ENST00000532465 MAP1SQ66K74 1059 aaPredicted RBP23.76■■□□□ 1.39
LMNB2-205ENST00000532465 MRPL50Q8N5N7 158 aaKnown RBP23.76■■□□□ 1.39
LMNB2-205ENST00000532465 PASKQ96RG2 1323 aa23.76■■□□□ 1.39
LMNB2-205ENST00000532465 ECE2O60344 883 aa23.75■■□□□ 1.39
LMNB2-205ENST00000532465 ITGBL1O95965 494 aaPredicted RBP23.75■■□□□ 1.39
LMNB2-205ENST00000532465 SLC4A10Q6U841 1118 aa23.75■■□□□ 1.39
LMNB2-205ENST00000532465 ZC3H12CQ9C0D7 883 aaKnown RBP23.75■■□□□ 1.39
LMNB2-205ENST00000532465 BSDC1Q9NW68 430 aaPredicted RBP23.75■■□□□ 1.39
LMNB2-205ENST00000532465 XDHP47989 1333 aa23.75■■□□□ 1.39
LMNB2-205ENST00000532465 CSF1RP07333 972 aa23.74■■□□□ 1.39
LMNB2-205ENST00000532465 ITGA6P23229 1130 aa23.74■■□□□ 1.39
LMNB2-205ENST00000532465 BCL2L13Q9BXK5 485 aa23.74■■□□□ 1.39
LMNB2-205ENST00000532465 KCNQ5Q9NR82 932 aa23.74■■□□□ 1.39
LMNB2-205ENST00000532465 MINPP1Q9UNW1 487 aa23.74■■□□□ 1.39
LMNB2-205ENST00000532465 PSMD14O00487 310 aa23.73■■□□□ 1.39
LMNB2-205ENST00000532465 USP50Q70EL3 339 aaPredicted RBP23.73■■□□□ 1.39
LMNB2-205ENST00000532465 CNTROBQ8N137 903 aa23.73■■□□□ 1.39
LMNB2-205ENST00000532465 SSH1Q8WYL5 1049 aa23.73■■□□□ 1.39
LMNB2-205ENST00000532465 ADARB2Q9NS39 739 aaKnown RBP23.73■■□□□ 1.39
LMNB2-205ENST00000532465 WTIPA6NIX2 430 aaPredicted RBP23.72■■□□□ 1.39
LMNB2-205ENST00000532465 IGHMBP2P38935 993 aaKnown RBP23.72■■□□□ 1.39
LMNB2-205ENST00000532465 FOXO4P98177 505 aa23.72■■□□□ 1.39
LMNB2-205ENST00000532465 ZBTB12Q9Y330 459 aaPredicted RBP23.72■■□□□ 1.39
LMNB2-205ENST00000532465 SHTN1A0MZ66 631 aa23.71■■□□□ 1.39
LMNB2-205ENST00000532465 GRM8O00222 908 aa23.71■■□□□ 1.39
LMNB2-205ENST00000532465 ALDH1L1O75891 902 aa23.71■■□□□ 1.39
LMNB2-205ENST00000532465 ATP2B4P23634 1241 aa23.71■■□□□ 1.39
LMNB2-205ENST00000532465 TRMT2AQ8IZ69 625 aaKnown RBP23.71■■□□□ 1.39
LMNB2-205ENST00000532465 SRCIN1Q9C0H9 1055 aa23.71■■□□□ 1.39
LMNB2-205ENST00000532465 CREBZFQ9NS37 354 aa23.71■■□□□ 1.39
LMNB2-205ENST00000532465 EPHA10Q5JZY3 1008 aa23.7■■□□□ 1.38
LMNB2-205ENST00000532465 SCN9AQ15858 1988 aa23.7■■□□□ 1.38
LMNB2-205ENST00000532465 G3V3G9 751 aa23.69■■□□□ 1.38
LMNB2-205ENST00000532465 DCAF8Q5TAQ9 597 aa23.69■■□□□ 1.38
LMNB2-205ENST00000532465 DIEXFQ68CQ4 756 aaKnown RBP23.69■■□□□ 1.38
LMNB2-205ENST00000532465 MIER1Q8N108 512 aa23.69■■□□□ 1.38
LMNB2-205ENST00000532465 C9orf78Q9NZ63 289 aaPredicted RBP23.69■■□□□ 1.38
LMNB2-205ENST00000532465 CNOT7Q9UIV1 285 aaKnown RBP23.69■■□□□ 1.38
LMNB2-205ENST00000532465 ANKRD18BA2A2Z9 1011 aa23.68■■□□□ 1.38
LMNB2-205ENST00000532465 MICALL2Q8IY33 904 aa23.68■■□□□ 1.38
LMNB2-205ENST00000532465 TRPM4Q8TD43 1214 aa23.68■■□□□ 1.38
LMNB2-205ENST00000532465 MPHOSPH8Q99549 860 aa23.68■■□□□ 1.38
LMNB2-205ENST00000532465 CHMP3Q9Y3E7 222 aa23.68■■□□□ 1.38
LMNB2-205ENST00000532465 PTPRCP08575 1304 aa23.67■■□□□ 1.38
LMNB2-205ENST00000532465 CCT4P50991 539 aaKnown RBP23.67■■□□□ 1.38
LMNB2-205ENST00000532465 LMBR1LQ6UX01 489 aa23.67■■□□□ 1.38
LMNB2-205ENST00000532465 JMYQ8N9B5 988 aa23.67■■□□□ 1.38
LMNB2-205ENST00000532465 HIRAP54198 1017 aaPredicted RBP23.66■■□□□ 1.38
LMNB2-205ENST00000532465 FMR1Q06787 632 aaKnown RBP eCLIP23.66■■□□□ 1.386e-9■■■□□ 18.9
LMNB2-205ENST00000532465 DPF2Q92785 391 aa23.66■■□□□ 1.38
LMNB2-205ENST00000532465 MED23Q9ULK4 1368 aa23.65■■□□□ 1.38
LMNB2-205ENST00000532465 TMEM88BA6NKF7 163 aa23.65■■□□□ 1.38
LMNB2-205ENST00000532465 H7C1D1 291 aa23.65■■□□□ 1.38
LMNB2-205ENST00000532465 IFIT5Q13325 482 aaKnown RBP23.65■■□□□ 1.38
LMNB2-205ENST00000532465 ALDH1L2Q3SY69 923 aa23.65■■□□□ 1.38
LMNB2-205ENST00000532465 SMC4Q9NTJ3 1288 aa23.65■■□□□ 1.38
LMNB2-205ENST00000532465 MKRN1Q9UHC7 482 aaKnown RBP23.65■■□□□ 1.38
LMNB2-205ENST00000532465 VIL1P09327 827 aaKnown RBP23.64■■□□□ 1.37
LMNB2-205ENST00000532465 NBPF7P0C2Y1 421 aaPredicted RBP23.64■■□□□ 1.37
LMNB2-205ENST00000532465 SUCLG2Q96I99 432 aa23.64■■□□□ 1.37
LMNB2-205ENST00000532465 LEMD3Q9Y2U8 911 aa23.64■■□□□ 1.37
LMNB2-205ENST00000532465 TRAF5O00463 557 aa23.63■■□□□ 1.37
LMNB2-205ENST00000532465 RPS12P25398 132 aaKnown RBP23.63■■□□□ 1.37
LMNB2-205ENST00000532465 CHRNDQ07001 517 aa23.63■■□□□ 1.37
LMNB2-205ENST00000532465 SAMD7Q7Z3H4 446 aa23.63■■□□□ 1.37
LMNB2-205ENST00000532465 TXNRD3Q86VQ6 643 aa23.63■■□□□ 1.37
LMNB2-205ENST00000532465 ANKRD2Q9GZV1 360 aa23.63■■□□□ 1.37
LMNB2-205ENST00000532465 EGFRP00533 1210 aa23.62■■□□□ 1.37
LMNB2-205ENST00000532465 KLRK1P26718 216 aa23.62■■□□□ 1.37
LMNB2-205ENST00000532465 KAZALD1Q96I82 304 aa23.62■■□□□ 1.37
LMNB2-205ENST00000532465 ZNF594Q96JF6 807 aaPredicted RBP23.62■■□□□ 1.37
LMNB2-205ENST00000532465 ZNF804BA4D1E1 1349 aa23.61■■□□□ 1.37
LMNB2-205ENST00000532465 UTYO14607 1347 aa23.61■■□□□ 1.37
LMNB2-205ENST00000532465 PSME4Q14997 1843 aa23.61■■□□□ 1.37
LMNB2-205ENST00000532465 CCDC57Q2TAC2 916 aa23.61■■□□□ 1.37
LMNB2-205ENST00000532465 TBC1D10BQ4KMP7 808 aaPredicted RBP23.61■■□□□ 1.37
LMNB2-205ENST00000532465 PODNQ7Z5L7 613 aa23.61■■□□□ 1.37
LMNB2-205ENST00000532465 PGAP2Q9UHJ9 254 aa23.61■■□□□ 1.37
LMNB2-205ENST00000532465 SNAP23O00161 211 aa23.6■■□□□ 1.37
LMNB2-205ENST00000532465 CT47B1P0C2W7 299 aaPredicted RBP23.6■■□□□ 1.37
LMNB2-205ENST00000532465 RSBN1LQ6PCB5 846 aaPredicted RBP23.6■■□□□ 1.37
LMNB2-205ENST00000532465 HELBQ8NG08 1087 aaPredicted RBP23.6■■□□□ 1.37
LMNB2-205ENST00000532465 GLIS2Q9BZE0 524 aaPredicted RBP23.6■■□□□ 1.37
LMNB2-205ENST00000532465 CNTNAP1P78357 1384 aa23.6■■□□□ 1.37
LMNB2-205ENST00000532465 USP17L3A6NCW0 530 aa23.59■■□□□ 1.37
LMNB2-205ENST00000532465 USP17L4A6NCW7 530 aa23.59■■□□□ 1.37
LMNB2-205ENST00000532465 TAF5LO75529 589 aa23.59■■□□□ 1.37
LMNB2-205ENST00000532465 TAF7LQ5H9L4 462 aa23.59■■□□□ 1.37
LMNB2-205ENST00000532465 RBM26Q5T8P6 1007 aaKnown RBP23.59■■□□□ 1.37
LMNB2-205ENST00000532465 USP17L1Q7RTZ2 530 aa23.59■■□□□ 1.37
LMNB2-205ENST00000532465 ZC3H15Q8WU90 426 aaKnown RBP23.59■■□□□ 1.37
LMNB2-205ENST00000532465 A0A1B0GUL6 1792 aa23.58■■□□□ 1.37
LMNB2-205ENST00000532465 KCNJ4P48050 445 aa23.58■■□□□ 1.37
LMNB2-205ENST00000532465 COA1Q9GZY4 146 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms