RNA–Protein interactions for RNA: ENST00000530551.5

CCDC180-212, Transcript of coiled-coil domain containing 180, humanhuman

TSL 2

Gene CCDC180, Length 665 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180-212ENST00000530551 TPTE2Q6XPS3 522 aa11.71□□□□□ -0.53
CCDC180-212ENST00000530551 SAPCD2Q86UD0 394 aa11.71□□□□□ -0.53
CCDC180-212ENST00000530551 FMNL2Q96PY5 1086 aa11.71□□□□□ -0.53
CCDC180-212ENST00000530551 TSKSQ9UJT2 592 aa11.71□□□□□ -0.53
CCDC180-212ENST00000530551 ZNF652Q9Y2D9 606 aa11.71□□□□□ -0.53
CCDC180-212ENST00000530551 IRF6O14896 467 aa11.7□□□□□ -0.54
CCDC180-212ENST00000530551 AOC2O75106 756 aa11.7□□□□□ -0.54
CCDC180-212ENST00000530551 FMR1Q06787 632 aaKnown RBP eCLIP11.7□□□□□ -0.54
CCDC180-212ENST00000530551 TEFQ10587 303 aa11.7□□□□□ -0.54
CCDC180-212ENST00000530551 GRIPAP1Q4V328 841 aa11.7□□□□□ -0.54
CCDC180-212ENST00000530551 CC2D2BQ6DHV5 1058 aa11.7□□□□□ -0.54
CCDC180-212ENST00000530551 CCDC102AQ96A19 550 aa11.7□□□□□ -0.54
CCDC180-212ENST00000530551 POLR3GLQ9BT43 218 aa11.7□□□□□ -0.54
CCDC180-212ENST00000530551 COL4A5P29400 1685 aa11.69□□□□□ -0.54
CCDC180-212ENST00000530551 TRAF5O00463 557 aa11.69□□□□□ -0.54
CCDC180-212ENST00000530551 TRIM66O15016 1216 aa11.69□□□□□ -0.54
CCDC180-212ENST00000530551 EPS15P42566 896 aa11.69□□□□□ -0.54
CCDC180-212ENST00000530551 DGKZQ13574 1117 aa11.69□□□□□ -0.54
CCDC180-212ENST00000530551 GJA3Q9Y6H8 435 aa11.69□□□□□ -0.54
CCDC180-212ENST00000530551 CASP8AP2Q9UKL3 1982 aa11.68□□□□□ -0.54
CCDC180-212ENST00000530551 GNAT3A8MTJ3 354 aa11.68□□□□□ -0.54
CCDC180-212ENST00000530551 CRY2Q49AN0 593 aa11.68□□□□□ -0.54
CCDC180-212ENST00000530551 IL17REQ8NFR9 667 aa11.68□□□□□ -0.54
CCDC180-212ENST00000530551 CEMIPQ8WUJ3 1361 aa11.67□□□□□ -0.54
CCDC180-212ENST00000530551 GAS2L2Q8NHY3 880 aa11.67□□□□□ -0.54
CCDC180-212ENST00000530551 ADARB2Q9NS39 739 aaKnown RBP11.67□□□□□ -0.54
CCDC180-212ENST00000530551 NIP7Q9Y221 180 aaKnown RBP eCLIP11.67□□□□□ -0.54
CCDC180-212ENST00000530551 KNSTRNQ9Y448 316 aa11.67□□□□□ -0.54
CCDC180-212ENST00000530551 DIAPH1O60610 1272 aaKnown RBP11.66□□□□□ -0.54
CCDC180-212ENST00000530551 CELF2O95319 508 aaKnown RBP11.66□□□□□ -0.54
CCDC180-212ENST00000530551 DDX10Q13206 875 aaKnown RBP11.66□□□□□ -0.54
CCDC180-212ENST00000530551 NOGQ13253 232 aa11.66□□□□□ -0.54
CCDC180-212ENST00000530551 PRPF38BQ5VTL8 546 aaKnown RBP11.66□□□□□ -0.54
CCDC180-212ENST00000530551 GPRC5DQ9NZD1 345 aa11.66□□□□□ -0.54
CCDC180-212ENST00000530551 PGAP2Q9UHJ9 254 aa11.66□□□□□ -0.54
CCDC180-212ENST00000530551 USP16Q9Y5T5 823 aa11.66□□□□□ -0.54
CCDC180-212ENST00000530551 HOXA10P31260 410 aaPredicted RBP11.65□□□□□ -0.54
CCDC180-212ENST00000530551 CIAPIN1Q6FI81 312 aa11.65□□□□□ -0.54
CCDC180-212ENST00000530551 LARGE2Q8N3Y3 721 aa11.65□□□□□ -0.54
CCDC180-212ENST00000530551 VPS33BQ9H267 617 aa11.65□□□□□ -0.54
CCDC180-212ENST00000530551 KIF7Q2M1P5 1343 aa11.64□□□□□ -0.55
CCDC180-212ENST00000530551 RIC1Q4ADV7 1423 aa11.64□□□□□ -0.55
CCDC180-212ENST00000530551 BTBD11A6QL63 1104 aa11.64□□□□□ -0.55
CCDC180-212ENST00000530551 PDE4DQ08499 809 aa11.64□□□□□ -0.55
CCDC180-212ENST00000530551 NIM1KQ8IY84 436 aa11.64□□□□□ -0.55
CCDC180-212ENST00000530551 SAGE1Q9NXZ1 904 aa11.64□□□□□ -0.55
CCDC180-212ENST00000530551 CDHR2Q9BYE9 1310 aa11.63□□□□□ -0.55
CCDC180-212ENST00000530551 KCNQ3O43525 872 aa11.63□□□□□ -0.55
CCDC180-212ENST00000530551 SNRPA1P09661 255 aaKnown RBP11.63□□□□□ -0.55
CCDC180-212ENST00000530551 GTF2E1P29083 439 aaPredicted RBP11.63□□□□□ -0.55
CCDC180-212ENST00000530551 PIP4K2AP48426 406 aaPredicted RBP11.63□□□□□ -0.55
CCDC180-212ENST00000530551 NYXQ9GZU5 481 aa11.63□□□□□ -0.55
CCDC180-212ENST00000530551 CDC37L1Q7L3B6 337 aa11.62□□□□□ -0.55
CCDC180-212ENST00000530551 CRAMP1Q96RY5 1269 aa11.62□□□□□ -0.55
CCDC180-212ENST00000530551 GLIS2Q9BZE0 524 aaPredicted RBP11.62□□□□□ -0.55
CCDC180-212ENST00000530551 RBM27Q9P2N5 1060 aaKnown RBP11.62□□□□□ -0.55
CCDC180-212ENST00000530551 ABCC12Q96J65 1359 aa11.62□□□□□ -0.55
CCDC180-212ENST00000530551 IBTKQ9P2D0 1353 aaPredicted RBP11.62□□□□□ -0.55
CCDC180-212ENST00000530551 FAM177BA6PVY3 158 aa11.61□□□□□ -0.55
CCDC180-212ENST00000530551 NBPF26B4DH59 902 aa11.61□□□□□ -0.55
CCDC180-212ENST00000530551 SOX10P56693 466 aa11.61□□□□□ -0.55
CCDC180-212ENST00000530551 EIF4G2P78344 907 aaKnown RBP eCLIP11.61□□□□□ -0.55
CCDC180-212ENST00000530551 HLFQ16534 295 aa11.61□□□□□ -0.55
CCDC180-212ENST00000530551 NBPF10Q6P3W6 841 aaKnown RBP11.61□□□□□ -0.55
CCDC180-212ENST00000530551 PADI6Q6TGC4 694 aa11.61□□□□□ -0.55
CCDC180-212ENST00000530551 NBPF15Q8N660 670 aa11.61□□□□□ -0.55
CCDC180-212ENST00000530551 RPGRQ92834 1020 aaKnown RBP11.61□□□□□ -0.55
CCDC180-212ENST00000530551 ZNRF3Q9ULT6 936 aa11.61□□□□□ -0.55
CCDC180-212ENST00000530551 NPC1L1Q9UHC9 1359 aa11.61□□□□□ -0.55
CCDC180-212ENST00000530551 COL3A1P02461 1466 aaPredicted RBP11.6□□□□□ -0.55
CCDC180-212ENST00000530551 PRAMEF22A3QJZ6 481 aa11.6□□□□□ -0.55
CCDC180-212ENST00000530551 PPIP5K2O43314 1243 aa11.6□□□□□ -0.55
CCDC180-212ENST00000530551 ST18O60284 1047 aa11.6□□□□□ -0.55
CCDC180-212ENST00000530551 PTPREP23469 700 aa11.6□□□□□ -0.55
CCDC180-212ENST00000530551 CXCL9Q07325 125 aa11.6□□□□□ -0.55
CCDC180-212ENST00000530551 AMHR2Q16671 573 aa11.6□□□□□ -0.55
CCDC180-212ENST00000530551 TMEM132AQ24JP5 1023 aa11.6□□□□□ -0.55
CCDC180-212ENST00000530551 FAM155AB1AL88 458 aaPredicted RBP11.59□□□□□ -0.55
CCDC180-212ENST00000530551 ERVV-1B6SEH8 477 aa11.59□□□□□ -0.55
CCDC180-212ENST00000530551 PPEF1O14829 653 aaPredicted RBP11.59□□□□□ -0.55
CCDC180-212ENST00000530551 COL9A1P20849 921 aa11.59□□□□□ -0.55
CCDC180-212ENST00000530551 GMPSP49915 693 aaPredicted RBP11.59□□□□□ -0.55
CCDC180-212ENST00000530551 PRSS12P56730 875 aa11.59□□□□□ -0.55
CCDC180-212ENST00000530551 HUNKP57058 714 aa11.59□□□□□ -0.55
CCDC180-212ENST00000530551 AOC3Q16853 763 aa11.59□□□□□ -0.55
CCDC180-212ENST00000530551 NUTM1Q86Y26 1132 aa11.59□□□□□ -0.55
CCDC180-212ENST00000530551 RBM17Q96I25 401 aaKnown RBP11.59□□□□□ -0.55
CCDC180-212ENST00000530551 ZIC5Q96T25 663 aa11.59□□□□□ -0.55
CCDC180-212ENST00000530551 RTFDC1Q9BY42 306 aaPredicted RBP11.59□□□□□ -0.55
CCDC180-212ENST00000530551 ZNF408Q9H9D4 720 aa11.59□□□□□ -0.55
CCDC180-212ENST00000530551 PPP1R3GB7ZBB8 358 aa11.58□□□□□ -0.56
CCDC180-212ENST00000530551 HSPA5P11021 654 aaKnown RBP11.58□□□□□ -0.56
CCDC180-212ENST00000530551 HIRAP54198 1017 aaPredicted RBP11.58□□□□□ -0.56
CCDC180-212ENST00000530551 TTC13Q8NBP0 860 aa11.58□□□□□ -0.56
CCDC180-212ENST00000530551 SUPT20HQ8NEM7 779 aa11.58□□□□□ -0.56
CCDC180-212ENST00000530551 TMX4Q9H1E5 349 aaPredicted RBP11.58□□□□□ -0.56
CCDC180-212ENST00000530551 NEFLP07196 543 aa11.57□□□□□ -0.56
CCDC180-212ENST00000530551 TNIP1Q15025 636 aa11.57□□□□□ -0.56
CCDC180-212ENST00000530551 RGMBQ6NW40 437 aa11.57□□□□□ -0.56
CCDC180-212ENST00000530551 GCC1Q96CN9 775 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms