RNA–Protein interactions for RNA: ENST00000530304.5

PCF11-203, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 1 (best)

Gene PCF11, Length 2,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-203ENST00000530304 RBM43Q6ZSC3 357 aaKnown RBP23■■□□□ 1.27
PCF11-203ENST00000530304 PLBD2Q8NHP8 589 aa23■■□□□ 1.27
PCF11-203ENST00000530304 LRRC2Q9BYS8 371 aa23■■□□□ 1.27
PCF11-203ENST00000530304 CLSTN2Q9H4D0 955 aa23■■□□□ 1.27
PCF11-203ENST00000530304 C19orf44Q9H6X5 657 aa23■■□□□ 1.27
PCF11-203ENST00000530304 ARFGEF2Q9Y6D5 1785 aa23■■□□□ 1.27
PCF11-203ENST00000530304 H3BQV1 296 aa22.99■■□□□ 1.27
PCF11-203ENST00000530304 HMGN5P82970 282 aaKnown RBP22.99■■□□□ 1.27
PCF11-203ENST00000530304 SCRN1Q12765 414 aa22.99■■□□□ 1.27
PCF11-203ENST00000530304 IFFO2Q5TF58 517 aa22.99■■□□□ 1.27
PCF11-203ENST00000530304 KBTBD3Q8NAB2 608 aa22.99■■□□□ 1.27
PCF11-203ENST00000530304 PYCARDQ9ULZ3 195 aa22.99■■□□□ 1.27
PCF11-203ENST00000530304 TRHP20396 242 aaPredicted RBP22.98■■□□□ 1.27
PCF11-203ENST00000530304 STOX1Q6ZVD7 989 aa22.98■■□□□ 1.27
PCF11-203ENST00000530304 BICD2Q8TD16 824 aa22.98■■□□□ 1.27
PCF11-203ENST00000530304 DDX17Q92841 729 aaKnown RBP22.98■■□□□ 1.27
PCF11-203ENST00000530304 CBX8Q9HC52 389 aa22.98■■□□□ 1.27
PCF11-203ENST00000530304 MTERF4Q7Z6M4 381 aaKnown RBP22.98■■□□□ 1.27
PCF11-203ENST00000530304 SH3TC1Q8TE82 1336 aa22.98■■□□□ 1.27
PCF11-203ENST00000530304 CABP4P57796 275 aa22.97■■□□□ 1.27
PCF11-203ENST00000530304 FGD1P98174 961 aa22.97■■□□□ 1.27
PCF11-203ENST00000530304 ZSCAN16Q9H4T2 348 aaPredicted RBP22.97■■□□□ 1.27
PCF11-203ENST00000530304 FOXO4P98177 505 aa22.97■■□□□ 1.27
PCF11-203ENST00000530304 SMARCC2Q8TAQ2 1214 aa22.96■■□□□ 1.27
PCF11-203ENST00000530304 CABLES1Q8TDN4 633 aa22.96■■□□□ 1.27
PCF11-203ENST00000530304 NEUROD6Q96NK8 337 aa22.96■■□□□ 1.27
PCF11-203ENST00000530304 SLFNL1Q499Z3 407 aa22.96■■□□□ 1.27
PCF11-203ENST00000530304 CFAP45Q9UL16 551 aa22.96■■□□□ 1.27
PCF11-203ENST00000530304 GOLIM4O00461 696 aa22.95■■□□□ 1.27
PCF11-203ENST00000530304 HMGB1P09429 215 aaKnown RBP22.95■■□□□ 1.27
PCF11-203ENST00000530304 CHRNA2Q15822 529 aa22.95■■□□□ 1.27
PCF11-203ENST00000530304 DHX32Q7L7V1 743 aaKnown RBP22.95■■□□□ 1.27
PCF11-203ENST00000530304 H7C1W4 665 aa22.95■■□□□ 1.26
PCF11-203ENST00000530304 PFKFB2O60825 505 aa22.95■■□□□ 1.26
PCF11-203ENST00000530304 ATG9AQ7Z3C6 839 aa22.95■■□□□ 1.26
PCF11-203ENST00000530304 LLPHQ9BRT6 129 aaKnown RBP22.95■■□□□ 1.26
PCF11-203ENST00000530304 PAG1Q9NWQ8 432 aa22.95■■□□□ 1.26
PCF11-203ENST00000530304 COL18A1P39060 1754 aa22.95■■□□□ 1.26
PCF11-203ENST00000530304 GTF2F1P35269 517 aaKnown RBP eCLIP22.95■■□□□ 1.264e-14■■■■□ 21
PCF11-203ENST00000530304 PALLDQ8WX93 1383 aa22.94■■□□□ 1.26
PCF11-203ENST00000530304 PTGS1P23219 599 aa22.94■■□□□ 1.26
PCF11-203ENST00000530304 TIMM10P62072 90 aa22.94■■□□□ 1.26
PCF11-203ENST00000530304 HELLSQ9NRZ9 838 aa22.94■■□□□ 1.26
PCF11-203ENST00000530304 NBPF26B4DH59 902 aa22.93■■□□□ 1.26
PCF11-203ENST00000530304 NBPF14Q5TI25 921 aa22.93■■□□□ 1.26
PCF11-203ENST00000530304 NBPF10Q6P3W6 841 aaKnown RBP22.93■■□□□ 1.26
PCF11-203ENST00000530304 NBPF15Q8N660 670 aa22.93■■□□□ 1.26
PCF11-203ENST00000530304 NSUN7Q8NE18 718 aaKnown RBP22.93■■□□□ 1.26
PCF11-203ENST00000530304 ABCC6O95255 1503 aa22.93■■□□□ 1.26
PCF11-203ENST00000530304 CEBPZQ03701 1054 aaKnown RBP22.93■■□□□ 1.26
PCF11-203ENST00000530304 TSC1Q92574 1164 aa22.93■■□□□ 1.26
PCF11-203ENST00000530304 DSCC1Q9BVC3 393 aa22.93■■□□□ 1.26
PCF11-203ENST00000530304 LAMA4Q16363 1823 aa22.92■■□□□ 1.26
PCF11-203ENST00000530304 CTDNEP1O95476 244 aa22.92■■□□□ 1.26
PCF11-203ENST00000530304 ADD1P35611 737 aaKnown RBP22.92■■□□□ 1.26
PCF11-203ENST00000530304 ZNF165P49910 485 aa22.92■■□□□ 1.26
PCF11-203ENST00000530304 APOBRQ0VD83 1088 aa22.92■■□□□ 1.26
PCF11-203ENST00000530304 DNAJC25Q9H1X3 360 aa22.92■■□□□ 1.26
PCF11-203ENST00000530304 EXOSC10Q01780 885 aaKnown RBP22.92■■□□□ 1.26
PCF11-203ENST00000530304 TDRD7Q8NHU6 1098 aaKnown RBP22.92■■□□□ 1.26
PCF11-203ENST00000530304 TRIM5Q9C035 493 aa22.91■■□□□ 1.26
PCF11-203ENST00000530304 NAA16Q6N069 864 aaPredicted RBP22.91■■□□□ 1.26
PCF11-203ENST00000530304 TTLL7Q6ZT98 887 aa22.91■■□□□ 1.26
PCF11-203ENST00000530304 CCDC186Q7Z3E2 898 aa22.91■■□□□ 1.26
PCF11-203ENST00000530304 PLA2G4DQ86XP0 818 aa22.91■■□□□ 1.26
PCF11-203ENST00000530304 GPR108Q9NPR9 543 aa22.91■■□□□ 1.26
PCF11-203ENST00000530304 CWC25Q9NXE8 425 aaPredicted RBP22.91■■□□□ 1.26
PCF11-203ENST00000530304 A0A0G2JLW4 131 aa22.9■■□□□ 1.26
PCF11-203ENST00000530304 FOSBP53539 338 aa22.9■■□□□ 1.26
PCF11-203ENST00000530304 ZMYM1Q5SVZ6 1142 aa22.9■■□□□ 1.26
PCF11-203ENST00000530304 DRC7Q8IY82 874 aa22.9■■□□□ 1.26
PCF11-203ENST00000530304 PLEKHG2Q9H7P9 1386 aa22.9■■□□□ 1.26
PCF11-203ENST00000530304 PTPDC1A2A3K4 754 aa22.9■■□□□ 1.26
PCF11-203ENST00000530304 HSPD1P10809 573 aaKnown RBP22.9■■□□□ 1.26
PCF11-203ENST00000530304 ATF3P18847 181 aa22.9■■□□□ 1.26
PCF11-203ENST00000530304 IL15P40933 162 aaPredicted RBP22.9■■□□□ 1.26
PCF11-203ENST00000530304 ZNF75DP51815 510 aa22.9■■□□□ 1.26
PCF11-203ENST00000530304 CCT2P78371 535 aaKnown RBP22.9■■□□□ 1.26
PCF11-203ENST00000530304 AGXT2Q9BYV1 514 aa22.9■■□□□ 1.26
PCF11-203ENST00000530304 GLI3P10071 1580 aa22.9■■□□□ 1.26
PCF11-203ENST00000530304 PKD1L3Q7Z443 1732 aa22.89■■□□□ 1.26
PCF11-203ENST00000530304 KIF3AQ9Y496 699 aa22.89■■□□□ 1.26
PCF11-203ENST00000530304 LAMB4A4D0S4 1761 aa22.89■■□□□ 1.25
PCF11-203ENST00000530304 E7EWF7 191 aa22.89■■□□□ 1.25
PCF11-203ENST00000530304 ZMYND15Q9H091 742 aa22.89■■□□□ 1.25
PCF11-203ENST00000530304 NRBP1Q9UHY1 535 aa22.89■■□□□ 1.25
PCF11-203ENST00000530304 LRRC24Q50LG9 513 aa22.88■■□□□ 1.25
PCF11-203ENST00000530304 FTOQ9C0B1 505 aaKnown RBP eCLIP22.88■■□□□ 1.25
PCF11-203ENST00000530304 RCOR1Q9UKL0 485 aa22.88■■□□□ 1.25
PCF11-203ENST00000530304 ZNF594Q96JF6 807 aaPredicted RBP22.88■■□□□ 1.25
PCF11-203ENST00000530304 ADAMTSL3P82987 1691 aa22.87■■□□□ 1.25
PCF11-203ENST00000530304 IFIT1P09914 478 aaKnown RBP22.87■■□□□ 1.25
PCF11-203ENST00000530304 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.87■■□□□ 1.25
PCF11-203ENST00000530304 TICAM2Q86XR7 235 aa22.87■■□□□ 1.25
PCF11-203ENST00000530304 ZNF710Q8N1W2 664 aa22.87■■□□□ 1.25
PCF11-203ENST00000530304 ARID3AQ99856 593 aa22.87■■□□□ 1.25
PCF11-203ENST00000530304 NCOA5Q9HCD5 579 aaKnown RBP22.87■■□□□ 1.25
PCF11-203ENST00000530304 CAVIN2O95810 425 aa22.87■■□□□ 1.25
PCF11-203ENST00000530304 CCAR1Q8IX12 1150 aaKnown RBP22.87■■□□□ 1.25
PCF11-203ENST00000530304 MAST3O60307 1309 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 180.5 ms