RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 NCKAP5LQ9HCH0 1330 aa8.3□□□□□ -1.08
CTNND1-218ENST00000528232 KCNA6P17658 529 aa8.3□□□□□ -1.08
CTNND1-218ENST00000528232 PTPN14Q15678 1187 aa8.3□□□□□ -1.08
CTNND1-218ENST00000528232 ENOX2Q16206 610 aaKnown RBP8.3□□□□□ -1.08
CTNND1-218ENST00000528232 CCDC181Q5TID7 509 aa8.3□□□□□ -1.08
CTNND1-218ENST00000528232 CKAP2LQ8IYA6 745 aa8.3□□□□□ -1.08
CTNND1-218ENST00000528232 ZNF444Q8N0Y2 327 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-218ENST00000528232 PIBF1Q8WXW3 757 aa8.3□□□□□ -1.08
CTNND1-218ENST00000528232 RPGRQ92834 1020 aaKnown RBP8.3□□□□□ -1.08
CTNND1-218ENST00000528232 INTS4Q96HW7 963 aaKnown RBP8.3□□□□□ -1.08
CTNND1-218ENST00000528232 KRT23Q9C075 422 aa8.3□□□□□ -1.08
CTNND1-218ENST00000528232 CENPHQ9H3R5 247 aa8.3□□□□□ -1.08
CTNND1-218ENST00000528232 SNRKQ9NRH2 765 aa8.3□□□□□ -1.08
CTNND1-218ENST00000528232 PCDH11XQ9BZA7 1347 aa8.3□□□□□ -1.08
CTNND1-218ENST00000528232 PCDH11YQ9BZA8 1340 aa8.3□□□□□ -1.08
CTNND1-218ENST00000528232 MLH3Q9UHC1 1453 aa8.3□□□□□ -1.08
CTNND1-218ENST00000528232 ADAMTS2O95450 1211 aa8.29□□□□□ -1.08
CTNND1-218ENST00000528232 CHMLP26374 656 aa8.29□□□□□ -1.08
CTNND1-218ENST00000528232 GSDMDP57764 484 aa8.29□□□□□ -1.08
CTNND1-218ENST00000528232 LMBR1LQ6UX01 489 aa8.29□□□□□ -1.08
CTNND1-218ENST00000528232 CNNM3Q8NE01 707 aa8.29□□□□□ -1.08
CTNND1-218ENST00000528232 CCDC102AQ96A19 550 aa8.29□□□□□ -1.08
CTNND1-218ENST00000528232 ZHX3Q9H4I2 956 aa8.29□□□□□ -1.08
CTNND1-218ENST00000528232 USP25Q9UHP3 1055 aa8.29□□□□□ -1.08
CTNND1-218ENST00000528232 UNC13BO14795 1591 aa8.29□□□□□ -1.08
CTNND1-218ENST00000528232 F13A1P00488 732 aa8.29□□□□□ -1.08
CTNND1-218ENST00000528232 IL2RBP14784 551 aa8.29□□□□□ -1.08
CTNND1-218ENST00000528232 ATP7BP35670 1465 aa8.29□□□□□ -1.08
CTNND1-218ENST00000528232 TRPM1Q7Z4N2 1603 aa8.29□□□□□ -1.08
CTNND1-218ENST00000528232 ZNF397Q8NF99 534 aaPredicted RBP8.29□□□□□ -1.08
CTNND1-218ENST00000528232 JARID2Q92833 1246 aaPredicted RBP8.29□□□□□ -1.08
CTNND1-218ENST00000528232 CNNM2Q9H8M5 875 aa8.29□□□□□ -1.08
CTNND1-218ENST00000528232 TMEM2Q9UHN6 1383 aa8.29□□□□□ -1.08
CTNND1-218ENST00000528232 KIF5BP33176 963 aa8.29□□□□□ -1.08
CTNND1-218ENST00000528232 SF3B2Q13435 895 aaKnown RBP8.29□□□□□ -1.08
CTNND1-218ENST00000528232 ATP2B3Q16720 1220 aa8.29□□□□□ -1.08
CTNND1-218ENST00000528232 TMOD2Q9NZR1 351 aa8.29□□□□□ -1.08
CTNND1-218ENST00000528232 LDHCP07864 332 aa8.29□□□□□ -1.08
CTNND1-218ENST00000528232 BRF1Q92994 677 aa8.29□□□□□ -1.08
CTNND1-218ENST00000528232 PAG1Q9NWQ8 432 aa8.29□□□□□ -1.08
CTNND1-218ENST00000528232 TFIP11Q9UBB9 837 aaKnown RBP8.29□□□□□ -1.08
CTNND1-218ENST00000528232 ADCY5O95622 1261 aa8.28□□□□□ -1.08
CTNND1-218ENST00000528232 EIF5P55010 431 aaKnown RBP8.28□□□□□ -1.08
CTNND1-218ENST00000528232 NLRP5P59047 1200 aa8.28□□□□□ -1.08
CTNND1-218ENST00000528232 KANK3Q6NY19 840 aa8.28□□□□□ -1.08
CTNND1-218ENST00000528232 TOP1P11387 765 aaKnown RBP8.28□□□□□ -1.08
CTNND1-218ENST00000528232 ZNF76P36508 570 aa8.28□□□□□ -1.08
CTNND1-218ENST00000528232 PDE4BQ07343 736 aa8.28□□□□□ -1.08
CTNND1-218ENST00000528232 BANK1Q8NDB2 785 aa8.28□□□□□ -1.08
CTNND1-218ENST00000528232 CCDC12Q8WUD4 166 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-218ENST00000528232 RAB34Q9BZG1 259 aa8.28□□□□□ -1.08
CTNND1-218ENST00000528232 PA2G4Q9UQ80 394 aaKnown RBP8.28□□□□□ -1.08
CTNND1-218ENST00000528232 EFCAB6Q5THR3 1501 aa8.28□□□□□ -1.08
CTNND1-218ENST00000528232 PLEKHG3A1L390 1219 aa8.28□□□□□ -1.08
CTNND1-218ENST00000528232 HAND2P61296 217 aa8.28□□□□□ -1.08
CTNND1-218ENST00000528232 USP48Q86UV5 1035 aa8.28□□□□□ -1.08
CTNND1-218ENST00000528232 DDX21Q9NR30 783 aaKnown RBP eCLIP8.28□□□□□ -1.084e-6■□□□□ 11.2
CTNND1-218ENST00000528232 ANKRD62A6NC57 917 aa8.28□□□□□ -1.08
CTNND1-218ENST00000528232 SEC24BO95487 1268 aa8.28□□□□□ -1.08
CTNND1-218ENST00000528232 SSBP05455 408 aaKnown RBP eCLIP8.28□□□□□ -1.081e-7■■■■■ 26.8
CTNND1-218ENST00000528232 GIGYF2Q6Y7W6 1299 aaKnown RBP8.28□□□□□ -1.08
CTNND1-218ENST00000528232 Q6ZUG5 572 aa8.28□□□□□ -1.08
CTNND1-218ENST00000528232 NECAB1Q8N987 351 aa8.28□□□□□ -1.08
CTNND1-218ENST00000528232 NFATC2IPQ8NCF5 419 aa8.28□□□□□ -1.08
CTNND1-218ENST00000528232 CNPY2Q9Y2B0 182 aa8.28□□□□□ -1.08
CTNND1-218ENST00000528232 ARAP3Q8WWN8 1544 aa8.28□□□□□ -1.08
CTNND1-218ENST00000528232 KLF18A0A0U1RQI7 1052 aa8.28□□□□□ -1.08
CTNND1-218ENST00000528232 CCDC194A0A1B0GVG4 234 aa8.28□□□□□ -1.08
CTNND1-218ENST00000528232 RNF113AO15541 343 aaKnown RBP8.28□□□□□ -1.08
CTNND1-218ENST00000528232 GSTO1P78417 241 aa8.28□□□□□ -1.08
CTNND1-218ENST00000528232 MAPK8IP2Q13387 824 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-218ENST00000528232 TMEM266Q2M3C6 531 aa8.28□□□□□ -1.08
CTNND1-218ENST00000528232 GBP6Q6ZN66 633 aa8.28□□□□□ -1.08
CTNND1-218ENST00000528232 CCDC50Q8IVM0 306 aa8.28□□□□□ -1.08
CTNND1-218ENST00000528232 FAM114A1Q8IWE2 563 aa8.28□□□□□ -1.08
CTNND1-218ENST00000528232 TSG101Q99816 390 aa8.28□□□□□ -1.08
CTNND1-218ENST00000528232 TUBBP07437 444 aa8.27□□□□□ -1.08
CTNND1-218ENST00000528232 ARHGAP29Q52LW3 1261 aa8.27□□□□□ -1.08
CTNND1-218ENST00000528232 CCDC178Q5BJE1 867 aa8.27□□□□□ -1.08
CTNND1-218ENST00000528232 FAM177A1Q8N128 213 aaPredicted RBP8.27□□□□□ -1.08
CTNND1-218ENST00000528232 TMTC2Q8N394 836 aa8.27□□□□□ -1.08
CTNND1-218ENST00000528232 UGGT1Q9NYU2 1555 aa8.27□□□□□ -1.09
CTNND1-218ENST00000528232 CWF19L2Q2TBE0 894 aaKnown RBP8.27□□□□□ -1.09
CTNND1-218ENST00000528232 CREB3L3Q68CJ9 461 aa8.27□□□□□ -1.09
CTNND1-218ENST00000528232 RUFY3Q7L099 469 aa8.27□□□□□ -1.09
CTNND1-218ENST00000528232 CCDC148Q8NFR7 591 aa8.27□□□□□ -1.09
CTNND1-218ENST00000528232 RSRC1Q96IZ7 334 aaKnown RBP8.27□□□□□ -1.09
CTNND1-218ENST00000528232 CRNKL1Q9BZJ0 848 aaKnown RBP8.27□□□□□ -1.09
CTNND1-218ENST00000528232 BICC1Q9H694 974 aaKnown RBP8.27□□□□□ -1.09
CTNND1-218ENST00000528232 CCDC171Q6TFL3 1326 aa8.27□□□□□ -1.09
CTNND1-218ENST00000528232 BAG3O95817 575 aa8.27□□□□□ -1.09
CTNND1-218ENST00000528232 G2E3Q7L622 706 aa8.27□□□□□ -1.09
CTNND1-218ENST00000528232 CRACR2BQ8N4Y2 399 aaPredicted RBP8.27□□□□□ -1.09
CTNND1-218ENST00000528232 KCNG4Q8TDN1 519 aa8.27□□□□□ -1.09
CTNND1-218ENST00000528232 SMARCC1Q92922 1105 aaPredicted RBP8.27□□□□□ -1.09
CTNND1-218ENST00000528232 SRRTQ9BXP5 876 aaKnown RBP8.27□□□□□ -1.09
CTNND1-218ENST00000528232 SPHKAPQ2M3C7 1700 aa8.27□□□□□ -1.09
CTNND1-218ENST00000528232 A6NNZ2 444 aa8.27□□□□□ -1.09
CTNND1-218ENST00000528232 FGFR1OPO95684 399 aaKnown RBP8.27□□□□□ -1.09
CTNND1-218ENST00000528232 AK2P54819 239 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms