RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 FOXO4P98177 505 aa23.43■■□□□ 1.34
TSPAN4-215ENST00000525334 EYA3Q99504 573 aa23.43■■□□□ 1.34
TSPAN4-215ENST00000525334 BSDC1Q9NW68 430 aaPredicted RBP23.43■■□□□ 1.34
TSPAN4-215ENST00000525334 XDHP47989 1333 aa23.42■■□□□ 1.34
TSPAN4-215ENST00000525334 UFL1O94874 794 aa23.42■■□□□ 1.34
TSPAN4-215ENST00000525334 CXCL9Q07325 125 aa23.42■■□□□ 1.34
TSPAN4-215ENST00000525334 CHADLQ6NUI6 762 aa23.42■■□□□ 1.34
TSPAN4-215ENST00000525334 GGA1Q9UJY5 639 aa23.42■■□□□ 1.34
TSPAN4-215ENST00000525334 YDJCA8MPS7 323 aa23.41■■□□□ 1.34
TSPAN4-215ENST00000525334 EPHX2P34913 555 aa23.41■■□□□ 1.34
TSPAN4-215ENST00000525334 IGHMBP2P38935 993 aaKnown RBP23.41■■□□□ 1.34
TSPAN4-215ENST00000525334 SCNN1DP51172 638 aa23.41■■□□□ 1.34
TSPAN4-215ENST00000525334 EPHA10Q5JZY3 1008 aa23.41■■□□□ 1.34
TSPAN4-215ENST00000525334 MINPP1Q9UNW1 487 aa23.41■■□□□ 1.34
TSPAN4-215ENST00000525334 RAD17O75943 681 aa23.4■■□□□ 1.34
TSPAN4-215ENST00000525334 HTRA3P83110 453 aa23.4■■□□□ 1.34
TSPAN4-215ENST00000525334 DBNDD1Q9H9R9 158 aa23.4■■□□□ 1.34
TSPAN4-215ENST00000525334 LMOD1P29536 600 aaPredicted RBP23.39■■□□□ 1.33
TSPAN4-215ENST00000525334 CIAPIN1Q6FI81 312 aa23.39■■□□□ 1.33
TSPAN4-215ENST00000525334 LDHDQ86WU2 507 aa23.39■■□□□ 1.33
TSPAN4-215ENST00000525334 CHMP3Q9Y3E7 222 aa23.39■■□□□ 1.33
TSPAN4-215ENST00000525334 UTYO14607 1347 aa23.38■■□□□ 1.33
TSPAN4-215ENST00000525334 ADAMTSL1Q8N6G6 1762 aa23.38■■□□□ 1.33
TSPAN4-215ENST00000525334 ANKRD18BA2A2Z9 1011 aa23.38■■□□□ 1.33
TSPAN4-215ENST00000525334 NBPF7P0C2Y1 421 aaPredicted RBP23.38■■□□□ 1.33
TSPAN4-215ENST00000525334 RARSP54136 660 aaKnown RBP23.38■■□□□ 1.33
TSPAN4-215ENST00000525334 DOK7Q18PE1 504 aa23.38■■□□□ 1.33
TSPAN4-215ENST00000525334 EAPPQ56P03 285 aaPredicted RBP23.38■■□□□ 1.33
TSPAN4-215ENST00000525334 LMBR1LQ6UX01 489 aa23.38■■□□□ 1.33
TSPAN4-215ENST00000525334 PNMA8AQ86V59 439 aaPredicted RBP23.38■■□□□ 1.33
TSPAN4-215ENST00000525334 SUCLG2Q96I99 432 aa23.38■■□□□ 1.33
TSPAN4-215ENST00000525334 ZC3H12CQ9C0D7 883 aaKnown RBP23.38■■□□□ 1.33
TSPAN4-215ENST00000525334 NOB1Q9ULX3 412 aaKnown RBP23.38■■□□□ 1.33
TSPAN4-215ENST00000525334 ECE2O60344 883 aa23.37■■□□□ 1.33
TSPAN4-215ENST00000525334 ATP2B4P23634 1241 aa23.37■■□□□ 1.33
TSPAN4-215ENST00000525334 BRPF1P55201 1214 aaPredicted RBP23.37■■□□□ 1.33
TSPAN4-215ENST00000525334 IFIT5Q13325 482 aaKnown RBP23.37■■□□□ 1.33
TSPAN4-215ENST00000525334 MPHOSPH8Q99549 860 aa23.37■■□□□ 1.33
TSPAN4-215ENST00000525334 EPS15P42566 896 aa23.36■■□□□ 1.33
TSPAN4-215ENST00000525334 GMPSP49915 693 aaPredicted RBP23.36■■□□□ 1.33
TSPAN4-215ENST00000525334 TNIP1Q15025 636 aa23.36■■□□□ 1.33
TSPAN4-215ENST00000525334 KAZALD1Q96I82 304 aa23.36■■□□□ 1.33
TSPAN4-215ENST00000525334 WTIPA6NIX2 430 aaPredicted RBP23.35■■□□□ 1.33
TSPAN4-215ENST00000525334 GPRC5DQ9NZD1 345 aa23.35■■□□□ 1.33
TSPAN4-215ENST00000525334 CCT4P50991 539 aaKnown RBP23.34■■□□□ 1.33
TSPAN4-215ENST00000525334 KCNQ5Q9NR82 932 aa23.34■■□□□ 1.33
TSPAN4-215ENST00000525334 CLEC11AQ9Y240 323 aa23.34■■□□□ 1.33
TSPAN4-215ENST00000525334 MED23Q9ULK4 1368 aa23.33■■□□□ 1.33
TSPAN4-215ENST00000525334 PSMD14O00487 310 aa23.33■■□□□ 1.33
TSPAN4-215ENST00000525334 CCDC57Q2TAC2 916 aa23.33■■□□□ 1.33
TSPAN4-215ENST00000525334 KLRG1Q96E93 195 aa23.33■■□□□ 1.33
TSPAN4-215ENST00000525334 API5Q9BZZ5 524 aaKnown RBP23.33■■□□□ 1.33
TSPAN4-215ENST00000525334 ANKRD2Q9GZV1 360 aa23.33■■□□□ 1.33
TSPAN4-215ENST00000525334 ZBED9Q6R2W3 1325 aa23.33■■□□□ 1.32
TSPAN4-215ENST00000525334 KIF16BQ96L93 1317 aa23.33■■□□□ 1.32
TSPAN4-215ENST00000525334 SCN9AQ15858 1988 aa23.32■■□□□ 1.32
TSPAN4-215ENST00000525334 G3V3G9 751 aa23.32■■□□□ 1.32
TSPAN4-215ENST00000525334 ITGBL1O95965 494 aaPredicted RBP23.32■■□□□ 1.32
TSPAN4-215ENST00000525334 CHRNDQ07001 517 aa23.32■■□□□ 1.32
TSPAN4-215ENST00000525334 DCAF8Q5TAQ9 597 aa23.32■■□□□ 1.32
TSPAN4-215ENST00000525334 ZNF594Q96JF6 807 aaPredicted RBP23.32■■□□□ 1.32
TSPAN4-215ENST00000525334 USP44Q9H0E7 712 aa23.32■■□□□ 1.32
TSPAN4-215ENST00000525334 BICC1Q9H694 974 aaKnown RBP23.32■■□□□ 1.32
TSPAN4-215ENST00000525334 A0A1B0GUL6 1792 aa23.32■■□□□ 1.32
TSPAN4-215ENST00000525334 LEMD3Q9Y2U8 911 aa23.31■■□□□ 1.32
TSPAN4-215ENST00000525334 ZBTB12Q9Y330 459 aaPredicted RBP23.31■■□□□ 1.32
TSPAN4-215ENST00000525334 PASKQ96RG2 1323 aa23.31■■□□□ 1.32
TSPAN4-215ENST00000525334 RABL6Q3YEC7 729 aaPredicted RBP23.3■■□□□ 1.32
TSPAN4-215ENST00000525334 TAF7LQ5H9L4 462 aa23.3■■□□□ 1.32
TSPAN4-215ENST00000525334 USP50Q70EL3 339 aaPredicted RBP23.3■■□□□ 1.32
TSPAN4-215ENST00000525334 ADARB2Q9NS39 739 aaKnown RBP23.3■■□□□ 1.32
TSPAN4-215ENST00000525334 ZNF804BA4D1E1 1349 aa23.3■■□□□ 1.32
TSPAN4-215ENST00000525334 CNTROBQ8N137 903 aa23.29■■□□□ 1.32
TSPAN4-215ENST00000525334 ANKRD44Q8N8A2 993 aa23.29■■□□□ 1.32
TSPAN4-215ENST00000525334 SHTN1A0MZ66 631 aa23.28■■□□□ 1.32
TSPAN4-215ENST00000525334 MAP1SQ66K74 1059 aaPredicted RBP23.28■■□□□ 1.32
TSPAN4-215ENST00000525334 LDHAL6AQ6ZMR3 332 aa23.28■■□□□ 1.32
TSPAN4-215ENST00000525334 ARHGAP45Q92619 1136 aa23.28■■□□□ 1.32
TSPAN4-215ENST00000525334 PSME4Q14997 1843 aa23.27■■□□□ 1.32
TSPAN4-215ENST00000525334 TAF5LO75529 589 aa23.27■■□□□ 1.32
TSPAN4-215ENST00000525334 BCAR3O75815 825 aa23.27■■□□□ 1.32
TSPAN4-215ENST00000525334 KLRK1P26718 216 aa23.27■■□□□ 1.32
TSPAN4-215ENST00000525334 KCNJ4P48050 445 aa23.27■■□□□ 1.32
TSPAN4-215ENST00000525334 TXNRD3Q86VQ6 643 aa23.27■■□□□ 1.32
TSPAN4-215ENST00000525334 MICALL2Q8IY33 904 aa23.27■■□□□ 1.32
TSPAN4-215ENST00000525334 JMYQ8N9B5 988 aa23.27■■□□□ 1.32
TSPAN4-215ENST00000525334 HELBQ8NG08 1087 aaPredicted RBP23.27■■□□□ 1.32
TSPAN4-215ENST00000525334 DPF2Q92785 391 aa23.27■■□□□ 1.32
TSPAN4-215ENST00000525334 CREBZFQ9NS37 354 aa23.27■■□□□ 1.32
TSPAN4-215ENST00000525334 CNOT7Q9UIV1 285 aaKnown RBP23.27■■□□□ 1.32
TSPAN4-215ENST00000525334 VIL1P09327 827 aaKnown RBP23.26■■□□□ 1.31
TSPAN4-215ENST00000525334 RPS12P25398 132 aaKnown RBP23.26■■□□□ 1.31
TSPAN4-215ENST00000525334 IFFO2Q5TF58 517 aa23.26■■□□□ 1.31
TSPAN4-215ENST00000525334 PODNQ7Z5L7 613 aa23.26■■□□□ 1.31
TSPAN4-215ENST00000525334 CNNM1Q9NRU3 951 aa23.26■■□□□ 1.31
TSPAN4-215ENST00000525334 SNAP23O00161 211 aa23.25■■□□□ 1.31
TSPAN4-215ENST00000525334 TRPM4Q8TD43 1214 aa23.25■■□□□ 1.31
TSPAN4-215ENST00000525334 H7C1D1 291 aa23.24■■□□□ 1.31
TSPAN4-215ENST00000525334 FRAT1Q92837 279 aaPredicted RBP23.24■■□□□ 1.31
TSPAN4-215ENST00000525334 PUS3Q9BZE2 481 aaKnown RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 697.6 ms