RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 SCNN1DP51172 638 aa21.88■■□□□ 1.09
CCNC-213ENST00000523541 MAP1SQ66K74 1059 aaPredicted RBP21.88■■□□□ 1.09
CCNC-213ENST00000523541 USP50Q70EL3 339 aaPredicted RBP21.88■■□□□ 1.09
CCNC-213ENST00000523541 GREM2Q9H772 168 aa21.88■■□□□ 1.09
CCNC-213ENST00000523541 GGA1Q9UJY5 639 aa21.88■■□□□ 1.09
CCNC-213ENST00000523541 XDHP47989 1333 aa21.87■■□□□ 1.09
CCNC-213ENST00000523541 ATP2B4P23634 1241 aa21.87■■□□□ 1.09
CCNC-213ENST00000523541 MRPL50Q8N5N7 158 aaKnown RBP21.87■■□□□ 1.09
CCNC-213ENST00000523541 IGHMBP2P38935 993 aaKnown RBP21.86■■□□□ 1.09
CCNC-213ENST00000523541 GMPSP49915 693 aaPredicted RBP21.86■■□□□ 1.09
CCNC-213ENST00000523541 CNTROBQ8N137 903 aa21.86■■□□□ 1.09
CCNC-213ENST00000523541 SRCIN1Q9C0H9 1055 aa21.86■■□□□ 1.09
CCNC-213ENST00000523541 DBNDD1Q9H9R9 158 aa21.86■■□□□ 1.09
CCNC-213ENST00000523541 CREBZFQ9NS37 354 aa21.86■■□□□ 1.09
CCNC-213ENST00000523541 GRM8O00222 908 aa21.85■■□□□ 1.09
CCNC-213ENST00000523541 UFL1O94874 794 aa21.85■■□□□ 1.09
CCNC-213ENST00000523541 DPF2Q92785 391 aa21.85■■□□□ 1.09
CCNC-213ENST00000523541 ADARB2Q9NS39 739 aaKnown RBP21.85■■□□□ 1.09
CCNC-213ENST00000523541 GPRC5DQ9NZD1 345 aa21.85■■□□□ 1.09
CCNC-213ENST00000523541 MINPP1Q9UNW1 487 aa21.85■■□□□ 1.09
CCNC-213ENST00000523541 DUOX1Q9NRD9 1551 aa21.84■■□□□ 1.09
CCNC-213ENST00000523541 ITGA6P23229 1130 aa21.84■■□□□ 1.09
CCNC-213ENST00000523541 DOK7Q18PE1 504 aa21.84■■□□□ 1.09
CCNC-213ENST00000523541 CDCA7LQ96GN5 454 aa21.84■■□□□ 1.09
CCNC-213ENST00000523541 GPR101Q96P66 508 aaPredicted RBP21.84■■□□□ 1.09
CCNC-213ENST00000523541 C9orf78Q9NZ63 289 aaPredicted RBP21.84■■□□□ 1.09
CCNC-213ENST00000523541 MKRN1Q9UHC7 482 aaKnown RBP21.84■■□□□ 1.09
CCNC-213ENST00000523541 COL4A1P02462 1669 aa21.84■■□□□ 1.09
CCNC-213ENST00000523541 YDJCA8MPS7 323 aa21.83■■□□□ 1.09
CCNC-213ENST00000523541 RPS12P25398 132 aaKnown RBP21.83■■□□□ 1.09
CCNC-213ENST00000523541 SLC4A10Q6U841 1118 aa21.83■■□□□ 1.09
CCNC-213ENST00000523541 SSH1Q8WYL5 1049 aa21.83■■□□□ 1.09
CCNC-213ENST00000523541 MPHOSPH8Q99549 860 aa21.83■■□□□ 1.09
CCNC-213ENST00000523541 ANKRD2Q9GZV1 360 aa21.83■■□□□ 1.09
CCNC-213ENST00000523541 LTBP1Q14766 1721 aa21.83■■□□□ 1.08
CCNC-213ENST00000523541 ANKRD18BA2A2Z9 1011 aa21.82■■□□□ 1.08
CCNC-213ENST00000523541 TMEM88BA6NKF7 163 aa21.82■■□□□ 1.08
CCNC-213ENST00000523541 ECE2O60344 883 aa21.82■■□□□ 1.08
CCNC-213ENST00000523541 ITGBL1O95965 494 aaPredicted RBP21.82■■□□□ 1.08
CCNC-213ENST00000523541 BRPF1P55201 1214 aaPredicted RBP21.82■■□□□ 1.08
CCNC-213ENST00000523541 FOXO4P98177 505 aa21.82■■□□□ 1.08
CCNC-213ENST00000523541 LEMD3Q9Y2U8 911 aa21.82■■□□□ 1.08
CCNC-213ENST00000523541 PASKQ96RG2 1323 aa21.81■■□□□ 1.08
CCNC-213ENST00000523541 IFIT5Q13325 482 aaKnown RBP21.81■■□□□ 1.08
CCNC-213ENST00000523541 PODNQ7Z5L7 613 aa21.81■■□□□ 1.08
CCNC-213ENST00000523541 JMYQ8N9B5 988 aa21.81■■□□□ 1.08
CCNC-213ENST00000523541 ZC3H15Q8WU90 426 aaKnown RBP21.81■■□□□ 1.08
CCNC-213ENST00000523541 UTYO14607 1347 aa21.8■■□□□ 1.08
CCNC-213ENST00000523541 ADAMTSL1Q8N6G6 1762 aa21.8■■□□□ 1.08
CCNC-213ENST00000523541 H7C1D1 291 aa21.8■■□□□ 1.08
CCNC-213ENST00000523541 MYH3P11055 1940 aa21.79■■□□□ 1.08
CCNC-213ENST00000523541 PSMD14O00487 310 aa21.79■■□□□ 1.08
CCNC-213ENST00000523541 CCT4P50991 539 aaKnown RBP21.79■■□□□ 1.08
CCNC-213ENST00000523541 FAM161AQ3B820 660 aa21.79■■□□□ 1.08
CCNC-213ENST00000523541 MIER1Q8N108 512 aa21.79■■□□□ 1.08
CCNC-213ENST00000523541 PGAP2Q9UHJ9 254 aa21.79■■□□□ 1.08
CCNC-213ENST00000523541 CNOT7Q9UIV1 285 aaKnown RBP21.79■■□□□ 1.08
CCNC-213ENST00000523541 ABT1Q9ULW3 272 aaKnown RBP21.79■■□□□ 1.08
CCNC-213ENST00000523541 ZBTB12Q9Y330 459 aaPredicted RBP21.79■■□□□ 1.08
CCNC-213ENST00000523541 CHMP3Q9Y3E7 222 aa21.79■■□□□ 1.08
CCNC-213ENST00000523541 VIL1P09327 827 aaKnown RBP21.78■■□□□ 1.08
CCNC-213ENST00000523541 CCDC57Q2TAC2 916 aa21.78■■□□□ 1.08
CCNC-213ENST00000523541 MED23Q9ULK4 1368 aa21.77■■□□□ 1.08
CCNC-213ENST00000523541 LMBR1LQ6UX01 489 aa21.77■■□□□ 1.08
CCNC-213ENST00000523541 MICALL2Q8IY33 904 aa21.77■■□□□ 1.08
CCNC-213ENST00000523541 SMC4Q9NTJ3 1288 aa21.77■■□□□ 1.08
CCNC-213ENST00000523541 SPEF2Q9C093 1822 aa21.77■■□□□ 1.08
CCNC-213ENST00000523541 MMP14P50281 582 aa21.75■■□□□ 1.07
CCNC-213ENST00000523541 PAXIP1Q6ZW49 1069 aaPredicted RBP21.75■■□□□ 1.07
CCNC-213ENST00000523541 AGBL3Q8NEM8 1001 aa21.75■■□□□ 1.07
CCNC-213ENST00000523541 COA1Q9GZY4 146 aa21.75■■□□□ 1.07
CCNC-213ENST00000523541 KCNQ5Q9NR82 932 aa21.75■■□□□ 1.07
CCNC-213ENST00000523541 RBM26Q5T8P6 1007 aaKnown RBP21.74■■□□□ 1.07
CCNC-213ENST00000523541 ZNF804BA4D1E1 1349 aa21.74■■□□□ 1.07
CCNC-213ENST00000523541 CNTNAP1P78357 1384 aa21.74■■□□□ 1.07
CCNC-213ENST00000523541 ZNF609O15014 1411 aa21.73■■□□□ 1.07
CCNC-213ENST00000523541 SHTN1A0MZ66 631 aa21.73■■□□□ 1.07
CCNC-213ENST00000523541 TRAF5O00463 557 aa21.73■■□□□ 1.07
CCNC-213ENST00000523541 NBPF7P0C2Y1 421 aaPredicted RBP21.73■■□□□ 1.07
CCNC-213ENST00000523541 HSPA1AP0DMV8 641 aaKnown RBP21.73■■□□□ 1.07
CCNC-213ENST00000523541 HSPA1BP0DMV9 641 aaKnown RBP21.73■■□□□ 1.07
CCNC-213ENST00000523541 KCNJ4P48050 445 aa21.73■■□□□ 1.07
CCNC-213ENST00000523541 CHRNDQ07001 517 aa21.73■■□□□ 1.07
CCNC-213ENST00000523541 EPHA10Q5JZY3 1008 aa21.73■■□□□ 1.07
CCNC-213ENST00000523541 LDHAL6AQ6ZMR3 332 aa21.73■■□□□ 1.07
CCNC-213ENST00000523541 TRPM4Q8TD43 1214 aa21.73■■□□□ 1.07
CCNC-213ENST00000523541 ARHGAP45Q92619 1136 aa21.73■■□□□ 1.07
CCNC-213ENST00000523541 FBXW7Q969H0 707 aa21.73■■□□□ 1.07
CCNC-213ENST00000523541 USP17L3A6NCW0 530 aa21.72■■□□□ 1.07
CCNC-213ENST00000523541 USP17L4A6NCW7 530 aa21.72■■□□□ 1.07
CCNC-213ENST00000523541 FMR1Q06787 632 aaKnown RBP eCLIP21.72■■□□□ 1.07
CCNC-213ENST00000523541 DEFB115Q30KQ5 88 aa21.72■■□□□ 1.07
CCNC-213ENST00000523541 RABL6Q3YEC7 729 aaPredicted RBP21.72■■□□□ 1.07
CCNC-213ENST00000523541 TBC1D10BQ4KMP7 808 aaPredicted RBP21.72■■□□□ 1.07
CCNC-213ENST00000523541 TAF7LQ5H9L4 462 aa21.72■■□□□ 1.07
CCNC-213ENST00000523541 RSBN1LQ6PCB5 846 aaPredicted RBP21.72■■□□□ 1.07
CCNC-213ENST00000523541 C15orf52Q6ZUT6 534 aaKnown RBP21.72■■□□□ 1.07
CCNC-213ENST00000523541 USP17L1Q7RTZ2 530 aa21.72■■□□□ 1.07
CCNC-213ENST00000523541 SAMD7Q7Z3H4 446 aa21.72■■□□□ 1.07
CCNC-213ENST00000523541 API5Q9BZZ5 524 aaKnown RBP21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms