RNA–Protein interactions for RNA: ENST00000521425.5

TRAM1-205, Transcript of translocation associated membrane protein 1, humanhuman

TSL 2 BASIC

Gene TRAM1, Length 3,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-205ENST00000521425 JAG2Q9Y219 1238 aa20.65■□□□□ 0.9
TRAM1-205ENST00000521425 PSMA5P28066 241 aa20.64■□□□□ 0.89
TRAM1-205ENST00000521425 NECTIN1Q15223 517 aa20.64■□□□□ 0.89
TRAM1-205ENST00000521425 HLFQ16534 295 aa20.64■□□□□ 0.89
TRAM1-205ENST00000521425 PAG1Q9NWQ8 432 aa20.64■□□□□ 0.89
TRAM1-205ENST00000521425 TRMT112Q9UI30 125 aaKnown RBP20.64■□□□□ 0.89
TRAM1-205ENST00000521425 ZSCAN20P17040 1043 aaPredicted RBP20.64■□□□□ 0.89
TRAM1-205ENST00000521425 TTC14Q96N46 770 aa20.64■□□□□ 0.89
TRAM1-205ENST00000521425 RGPD2P0DJD1 1756 aa20.63■□□□□ 0.89
TRAM1-205ENST00000521425 SLIT1O75093 1534 aa20.63■□□□□ 0.89
TRAM1-205ENST00000521425 LIG1P18858 919 aa20.63■□□□□ 0.89
TRAM1-205ENST00000521425 SPATA32Q96LK8 384 aa20.63■□□□□ 0.89
TRAM1-205ENST00000521425 MTMR6Q9Y217 621 aa20.63■□□□□ 0.89
TRAM1-205ENST00000521425 SCARF1Q14162 830 aa20.63■□□□□ 0.89
TRAM1-205ENST00000521425 CCDC94Q9BW85 323 aaPredicted RBP20.63■□□□□ 0.89
TRAM1-205ENST00000521425 DENND2AQ9ULE3 1009 aa20.63■□□□□ 0.89
TRAM1-205ENST00000521425 PLBD2Q8NHP8 589 aa20.62■□□□□ 0.89
TRAM1-205ENST00000521425 MTMR7Q9Y216 660 aa20.62■□□□□ 0.89
TRAM1-205ENST00000521425 KDM6AO15550 1401 aaPredicted RBP20.62■□□□□ 0.89
TRAM1-205ENST00000521425 NPHP1O15259 732 aa20.62■□□□□ 0.89
TRAM1-205ENST00000521425 ST3GAL1Q11201 340 aa20.62■□□□□ 0.89
TRAM1-205ENST00000521425 MAP4K1Q92918 833 aa20.62■□□□□ 0.89
TRAM1-205ENST00000521425 DACT1Q9NYF0 836 aa20.62■□□□□ 0.89
TRAM1-205ENST00000521425 NWD1Q149M9 1564 aa20.62■□□□□ 0.89
TRAM1-205ENST00000521425 UTRNP46939 3433 aa20.62■□□□□ 0.89
TRAM1-205ENST00000521425 KIF6Q6ZMV9 814 aa20.61■□□□□ 0.89
TRAM1-205ENST00000521425 ZNF771Q7L3S4 317 aaPredicted RBP20.6■□□□□ 0.89
TRAM1-205ENST00000521425 TTC6Q86TZ1 520 aa20.6■□□□□ 0.89
TRAM1-205ENST00000521425 PIBF1Q8WXW3 757 aa20.6■□□□□ 0.89
TRAM1-205ENST00000521425 INTS4Q96HW7 963 aaKnown RBP20.6■□□□□ 0.89
TRAM1-205ENST00000521425 ZAP70P43403 619 aa20.6■□□□□ 0.89
TRAM1-205ENST00000521425 MCMDC2Q4G0Z9 681 aa20.6■□□□□ 0.89
TRAM1-205ENST00000521425 ZSWIM6Q9HCJ5 1215 aa20.6■□□□□ 0.89
TRAM1-205ENST00000521425 DYNC1I1O14576 645 aa20.6■□□□□ 0.89
TRAM1-205ENST00000521425 IFIT5Q13325 482 aaKnown RBP20.6■□□□□ 0.89
TRAM1-205ENST00000521425 LUZP1Q86V48 1076 aa20.6■□□□□ 0.89
TRAM1-205ENST00000521425 ADCY5O95622 1261 aa20.59■□□□□ 0.89
TRAM1-205ENST00000521425 MYL10Q9BUA6 226 aa20.59■□□□□ 0.89
TRAM1-205ENST00000521425 ISY1Q9ULR0 285 aaKnown RBP20.59■□□□□ 0.89
TRAM1-205ENST00000521425 RPS6KB1P23443 525 aa20.59■□□□□ 0.89
TRAM1-205ENST00000521425 KRT85P78386 507 aa20.59■□□□□ 0.89
TRAM1-205ENST00000521425 MTERF4Q7Z6M4 381 aaKnown RBP20.59■□□□□ 0.89
TRAM1-205ENST00000521425 PIGBQ92521 554 aa20.59■□□□□ 0.89
TRAM1-205ENST00000521425 ATP6V1DQ9Y5K8 247 aa20.59■□□□□ 0.89
TRAM1-205ENST00000521425 ZNF445P59923 1031 aa20.59■□□□□ 0.89
TRAM1-205ENST00000521425 CCDC158Q5M9N0 1113 aa20.59■□□□□ 0.89
TRAM1-205ENST00000521425 RPAP1Q9BWH6 1393 aaPredicted RBP20.58■□□□□ 0.89
TRAM1-205ENST00000521425 MTX1Q13505 466 aa20.58■□□□□ 0.88
TRAM1-205ENST00000521425 SPATA31A3Q5VYP0 1347 aa20.58■□□□□ 0.88
TRAM1-205ENST00000521425 TOB2Q14106 344 aaPredicted RBP20.57■□□□□ 0.88
TRAM1-205ENST00000521425 STOX1Q6ZVD7 989 aa20.57■□□□□ 0.88
TRAM1-205ENST00000521425 GREM2Q9H772 168 aa20.57■□□□□ 0.88
TRAM1-205ENST00000521425 ZBTB1Q9Y2K1 713 aa20.57■□□□□ 0.88
TRAM1-205ENST00000521425 ZKSCAN3Q9BRR0 538 aa20.57■□□□□ 0.88
TRAM1-205ENST00000521425 ME1P48163 572 aa20.57■□□□□ 0.88
TRAM1-205ENST00000521425 XAGE2Q96GT9 111 aa20.57■□□□□ 0.88
TRAM1-205ENST00000521425 ABCF2Q9UG63 623 aa20.57■□□□□ 0.88
TRAM1-205ENST00000521425 BIN1O00499 593 aa20.56■□□□□ 0.88
TRAM1-205ENST00000521425 CPLX1O14810 134 aa20.56■□□□□ 0.88
TRAM1-205ENST00000521425 SF3A1Q15459 793 aaKnown RBP20.56■□□□□ 0.88
TRAM1-205ENST00000521425 HIP1O00291 1037 aa20.56■□□□□ 0.88
TRAM1-205ENST00000521425 GNL2Q13823 731 aaKnown RBP20.56■□□□□ 0.88
TRAM1-205ENST00000521425 TNMDQ9H2S6 317 aa20.56■□□□□ 0.88
TRAM1-205ENST00000521425 TMEM51Q9NW97 253 aa20.56■□□□□ 0.88
TRAM1-205ENST00000521425 SASS6Q6UVJ0 657 aa20.55■□□□□ 0.88
TRAM1-205ENST00000521425 EYA2O00167 538 aa20.55■□□□□ 0.88
TRAM1-205ENST00000521425 CMTR1Q8N1G2 835 aaKnown RBP20.55■□□□□ 0.88
TRAM1-205ENST00000521425 OSBP2Q969R2 916 aa20.55■□□□□ 0.88
TRAM1-205ENST00000521425 COPRSQ9NQ92 184 aa20.55■□□□□ 0.88
TRAM1-205ENST00000521425 M0R2C6 588 aa20.55■□□□□ 0.88
TRAM1-205ENST00000521425 CCDC183Q5T5S1 534 aa20.55■□□□□ 0.88
TRAM1-205ENST00000521425 PPP1R9BQ96SB3 815 aa20.55■□□□□ 0.88
TRAM1-205ENST00000521425 AOX1Q06278 1338 aa20.55■□□□□ 0.88
TRAM1-205ENST00000521425 RFX5P48382 616 aaPredicted RBP20.54■□□□□ 0.88
TRAM1-205ENST00000521425 UBE2HP62256 183 aa20.54■□□□□ 0.88
TRAM1-205ENST00000521425 FOXO4P98177 505 aa20.54■□□□□ 0.88
TRAM1-205ENST00000521425 HSP90AA4PQ58FG1 418 aa20.54■□□□□ 0.88
TRAM1-205ENST00000521425 PHF14O94880 888 aa20.54■□□□□ 0.88
TRAM1-205ENST00000521425 ITGA6P23229 1130 aa20.54■□□□□ 0.88
TRAM1-205ENST00000521425 SLC9C2Q5TAH2 1124 aa20.54■□□□□ 0.88
TRAM1-205ENST00000521425 MIGA1Q8NAN2 632 aa20.54■□□□□ 0.88
TRAM1-205ENST00000521425 TCHHQ07283 1943 aa20.54■□□□□ 0.88
TRAM1-205ENST00000521425 WTIPA6NIX2 430 aaPredicted RBP20.54■□□□□ 0.88
TRAM1-205ENST00000521425 ATP5JP18859 108 aa20.54■□□□□ 0.88
TRAM1-205ENST00000521425 NFXL1Q6ZNB6 911 aa20.54■□□□□ 0.88
TRAM1-205ENST00000521425 ATG9AQ7Z3C6 839 aa20.54■□□□□ 0.88
TRAM1-205ENST00000521425 RALYLQ86SE5 291 aaKnown RBP20.54■□□□□ 0.88
TRAM1-205ENST00000521425 SCRN1Q12765 414 aa20.53■□□□□ 0.88
TRAM1-205ENST00000521425 MICU3Q86XE3 530 aa20.53■□□□□ 0.88
TRAM1-205ENST00000521425 KIAA2012Q0VF49 1180 aa20.53■□□□□ 0.88
TRAM1-205ENST00000521425 CERS3Q8IU89 383 aa20.53■□□□□ 0.88
TRAM1-205ENST00000521425 KBTBD3Q8NAB2 608 aa20.53■□□□□ 0.88
TRAM1-205ENST00000521425 ZSCAN31Q96LW9 406 aaPredicted RBP20.53■□□□□ 0.88
TRAM1-205ENST00000521425 PUS7LQ9H0K6 701 aaKnown RBP20.53■□□□□ 0.88
TRAM1-205ENST00000521425 ATP2B3Q16720 1220 aa20.52■□□□□ 0.88
TRAM1-205ENST00000521425 NUP62CLQ9H1M0 184 aa20.52■□□□□ 0.88
TRAM1-205ENST00000521425 SH2B1Q9NRF2 756 aaPredicted RBP20.52■□□□□ 0.88
TRAM1-205ENST00000521425 PCDH11XQ9BZA7 1347 aa20.52■□□□□ 0.88
TRAM1-205ENST00000521425 PCDH11YQ9BZA8 1340 aa20.52■□□□□ 0.88
TRAM1-205ENST00000521425 COL15A1P39059 1388 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms