RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 USP50Q70EL3 339 aaPredicted RBP21.71■■□□□ 1.07
SQLE-205ENST00000521232 BSDC1Q9NW68 430 aaPredicted RBP21.71■■□□□ 1.07
SQLE-205ENST00000521232 ANKIB1Q9P2G1 1089 aa21.71■■□□□ 1.07
SQLE-205ENST00000521232 GMPSP49915 693 aaPredicted RBP21.7■■□□□ 1.06
SQLE-205ENST00000521232 CNTROBQ8N137 903 aa21.7■■□□□ 1.06
SQLE-205ENST00000521232 ZC3H12CQ9C0D7 883 aaKnown RBP21.7■■□□□ 1.06
SQLE-205ENST00000521232 GGA1Q9UJY5 639 aa21.7■■□□□ 1.06
SQLE-205ENST00000521232 JMYQ8N9B5 988 aa21.69■■□□□ 1.06
SQLE-205ENST00000521232 DBNDD1Q9H9R9 158 aa21.69■■□□□ 1.06
SQLE-205ENST00000521232 CREBZFQ9NS37 354 aa21.69■■□□□ 1.06
SQLE-205ENST00000521232 ADARB2Q9NS39 739 aaKnown RBP21.69■■□□□ 1.06
SQLE-205ENST00000521232 UFL1O94874 794 aa21.68■■□□□ 1.06
SQLE-205ENST00000521232 MAP1SQ66K74 1059 aaPredicted RBP21.68■■□□□ 1.06
SQLE-205ENST00000521232 GPR101Q96P66 508 aaPredicted RBP21.68■■□□□ 1.06
SQLE-205ENST00000521232 MINPP1Q9UNW1 487 aa21.68■■□□□ 1.06
SQLE-205ENST00000521232 XDHP47989 1333 aa21.68■■□□□ 1.06
SQLE-205ENST00000521232 ECE2O60344 883 aa21.67■■□□□ 1.06
SQLE-205ENST00000521232 ATP2B4P23634 1241 aa21.67■■□□□ 1.06
SQLE-205ENST00000521232 DOK7Q18PE1 504 aa21.67■■□□□ 1.06
SQLE-205ENST00000521232 BCL2L13Q9BXK5 485 aa21.67■■□□□ 1.06
SQLE-205ENST00000521232 PSMD14O00487 310 aa21.66■■□□□ 1.06
SQLE-205ENST00000521232 ITGA6P23229 1130 aa21.66■■□□□ 1.06
SQLE-205ENST00000521232 TRMT2AQ8IZ69 625 aaKnown RBP21.66■■□□□ 1.06
SQLE-205ENST00000521232 MRPL50Q8N5N7 158 aaKnown RBP21.66■■□□□ 1.06
SQLE-205ENST00000521232 DPF2Q92785 391 aa21.66■■□□□ 1.06
SQLE-205ENST00000521232 IGHMBP2P38935 993 aaKnown RBP21.65■■□□□ 1.06
SQLE-205ENST00000521232 FOXO4P98177 505 aa21.65■■□□□ 1.06
SQLE-205ENST00000521232 CDCA7LQ96GN5 454 aa21.65■■□□□ 1.06
SQLE-205ENST00000521232 KCNQ5Q9NR82 932 aa21.65■■□□□ 1.06
SQLE-205ENST00000521232 CNOT7Q9UIV1 285 aaKnown RBP21.65■■□□□ 1.06
SQLE-205ENST00000521232 ALDH1L1O75891 902 aa21.64■■□□□ 1.05
SQLE-205ENST00000521232 FAM161AQ3B820 660 aa21.64■■□□□ 1.05
SQLE-205ENST00000521232 ZBTB12Q9Y330 459 aaPredicted RBP21.64■■□□□ 1.05
SQLE-205ENST00000521232 TMEM88BA6NKF7 163 aa21.63■■□□□ 1.05
SQLE-205ENST00000521232 GRM8O00222 908 aa21.63■■□□□ 1.05
SQLE-205ENST00000521232 SLC4A10Q6U841 1118 aa21.63■■□□□ 1.05
SQLE-205ENST00000521232 SRCIN1Q9C0H9 1055 aa21.63■■□□□ 1.05
SQLE-205ENST00000521232 PGAP2Q9UHJ9 254 aa21.63■■□□□ 1.05
SQLE-205ENST00000521232 SPEF2Q9C093 1822 aa21.63■■□□□ 1.05
SQLE-205ENST00000521232 SCN9AQ15858 1988 aa21.63■■□□□ 1.05
SQLE-205ENST00000521232 WTIPA6NIX2 430 aaPredicted RBP21.62■■□□□ 1.05
SQLE-205ENST00000521232 G3V3G9 751 aa21.62■■□□□ 1.05
SQLE-205ENST00000521232 H7C1D1 291 aa21.62■■□□□ 1.05
SQLE-205ENST00000521232 VIL1P09327 827 aaKnown RBP21.62■■□□□ 1.05
SQLE-205ENST00000521232 RPS12P25398 132 aaKnown RBP21.62■■□□□ 1.05
SQLE-205ENST00000521232 CCT4P50991 539 aaKnown RBP21.62■■□□□ 1.05
SQLE-205ENST00000521232 HIRAP54198 1017 aaPredicted RBP21.62■■□□□ 1.05
SQLE-205ENST00000521232 DCAF8Q5TAQ9 597 aa21.62■■□□□ 1.05
SQLE-205ENST00000521232 SSH1Q8WYL5 1049 aa21.62■■□□□ 1.05
SQLE-205ENST00000521232 PTPRCP08575 1304 aa21.61■■□□□ 1.05
SQLE-205ENST00000521232 ANKRD18BA2A2Z9 1011 aa21.61■■□□□ 1.05
SQLE-205ENST00000521232 MICALL2Q8IY33 904 aa21.61■■□□□ 1.05
SQLE-205ENST00000521232 ZC3H15Q8WU90 426 aaKnown RBP21.61■■□□□ 1.05
SQLE-205ENST00000521232 MPHOSPH8Q99549 860 aa21.61■■□□□ 1.05
SQLE-205ENST00000521232 C9orf78Q9NZ63 289 aaPredicted RBP21.61■■□□□ 1.05
SQLE-205ENST00000521232 LEMD3Q9Y2U8 911 aa21.61■■□□□ 1.05
SQLE-205ENST00000521232 SHTN1A0MZ66 631 aa21.6■■□□□ 1.05
SQLE-205ENST00000521232 ALDH1L2Q3SY69 923 aa21.6■■□□□ 1.05
SQLE-205ENST00000521232 PODNQ7Z5L7 613 aa21.6■■□□□ 1.05
SQLE-205ENST00000521232 ANKRD2Q9GZV1 360 aa21.6■■□□□ 1.05
SQLE-205ENST00000521232 MED23Q9ULK4 1368 aa21.6■■□□□ 1.05
SQLE-205ENST00000521232 IFIT5Q13325 482 aaKnown RBP21.59■■□□□ 1.05
SQLE-205ENST00000521232 EPHA10Q5JZY3 1008 aa21.59■■□□□ 1.05
SQLE-205ENST00000521232 LMBR1LQ6UX01 489 aa21.59■■□□□ 1.05
SQLE-205ENST00000521232 TRPM4Q8TD43 1214 aa21.59■■□□□ 1.05
SQLE-205ENST00000521232 MKRN1Q9UHC7 482 aaKnown RBP21.58■■□□□ 1.05
SQLE-205ENST00000521232 UTYO14607 1347 aa21.57■■□□□ 1.04
SQLE-205ENST00000521232 CT47B1P0C2W7 299 aaPredicted RBP21.57■■□□□ 1.04
SQLE-205ENST00000521232 CNTNAP1P78357 1384 aa21.57■■□□□ 1.04
SQLE-205ENST00000521232 PSME4Q14997 1843 aa21.57■■□□□ 1.04
SQLE-205ENST00000521232 ZNF804BA4D1E1 1349 aa21.56■■□□□ 1.04
SQLE-205ENST00000521232 FMR1Q06787 632 aaKnown RBP eCLIP21.56■■□□□ 1.043e-7■□□□□ 8.2
SQLE-205ENST00000521232 CHRNDQ07001 517 aa21.56■■□□□ 1.04
SQLE-205ENST00000521232 RSBN1LQ6PCB5 846 aaPredicted RBP21.56■■□□□ 1.04
SQLE-205ENST00000521232 SAMD7Q7Z3H4 446 aa21.56■■□□□ 1.04
SQLE-205ENST00000521232 AGBL3Q8NEM8 1001 aa21.56■■□□□ 1.04
SQLE-205ENST00000521232 CHMP3Q9Y3E7 222 aa21.56■■□□□ 1.04
SQLE-205ENST00000521232 TRPM7Q96QT4 1865 aa21.56■■□□□ 1.04
SQLE-205ENST00000521232 ZNF609O15014 1411 aa21.55■■□□□ 1.04
SQLE-205ENST00000521232 USP17L3A6NCW0 530 aa21.55■■□□□ 1.04
SQLE-205ENST00000521232 USP17L4A6NCW7 530 aa21.55■■□□□ 1.04
SQLE-205ENST00000521232 TRAF5O00463 557 aa21.55■■□□□ 1.04
SQLE-205ENST00000521232 NBPF7P0C2Y1 421 aaPredicted RBP21.55■■□□□ 1.04
SQLE-205ENST00000521232 CCDC57Q2TAC2 916 aa21.55■■□□□ 1.04
SQLE-205ENST00000521232 DIEXFQ68CQ4 756 aaKnown RBP21.55■■□□□ 1.04
SQLE-205ENST00000521232 USP17L1Q7RTZ2 530 aa21.55■■□□□ 1.04
SQLE-205ENST00000521232 TXNRD3Q86VQ6 643 aa21.55■■□□□ 1.04
SQLE-205ENST00000521232 KAZALD1Q96I82 304 aa21.55■■□□□ 1.04
SQLE-205ENST00000521232 COA1Q9GZY4 146 aa21.55■■□□□ 1.04
SQLE-205ENST00000521232 TBC1D10BQ4KMP7 808 aaPredicted RBP21.54■■□□□ 1.04
SQLE-205ENST00000521232 CST9Q5W186 159 aa21.54■■□□□ 1.04
SQLE-205ENST00000521232 CDC37L1Q7L3B6 337 aa21.54■■□□□ 1.04
SQLE-205ENST00000521232 SUCLG2Q96I99 432 aa21.54■■□□□ 1.04
SQLE-205ENST00000521232 GMLQ99445 158 aa21.54■■□□□ 1.04
SQLE-205ENST00000521232 POLR2AP24928 1970 aaKnown RBP21.54■■□□□ 1.04
SQLE-205ENST00000521232 RASSF10A6NK89 507 aa21.53■■□□□ 1.04
SQLE-205ENST00000521232 EGFRP00533 1210 aa21.53■■□□□ 1.04
SQLE-205ENST00000521232 DEFB115Q30KQ5 88 aa21.53■■□□□ 1.04
SQLE-205ENST00000521232 MIER1Q8N108 512 aa21.53■■□□□ 1.04
SQLE-205ENST00000521232 GLIS2Q9BZE0 524 aaPredicted RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms