RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 TAGLNQ01995 201 aaKnown RBP7.02□□□□□ -1.29
HMGB1P23-201ENST00000518743 GNL2Q13823 731 aaKnown RBP7.02□□□□□ -1.29
HMGB1P23-201ENST00000518743 LIAT1Q6ZQX7 453 aa7.02□□□□□ -1.29
HMGB1P23-201ENST00000518743 PPARGC1BQ86YN6 1023 aaKnown RBP7.02□□□□□ -1.29
HMGB1P23-201ENST00000518743 L3MBTL2Q969R5 705 aa7.02□□□□□ -1.29
HMGB1P23-201ENST00000518743 LRRC59Q96AG4 307 aaKnown RBP7.02□□□□□ -1.29
HMGB1P23-201ENST00000518743 DUSP9Q99956 384 aaKnown RBP7.02□□□□□ -1.29
HMGB1P23-201ENST00000518743 HRH3Q9Y5N1 445 aa7.02□□□□□ -1.29
HMGB1P23-201ENST00000518743 NKTRP30414 1462 aaKnown RBP7.01□□□□□ -1.29
HMGB1P23-201ENST00000518743 GFRA3O60609 400 aa7.01□□□□□ -1.29
HMGB1P23-201ENST00000518743 STAU1O95793 577 aaKnown RBP7.01□□□□□ -1.29
HMGB1P23-201ENST00000518743 GNA15P30679 374 aa7.01□□□□□ -1.29
HMGB1P23-201ENST00000518743 PTGIRP43119 386 aa7.01□□□□□ -1.29
HMGB1P23-201ENST00000518743 ZAP70P43403 619 aa7.01□□□□□ -1.29
HMGB1P23-201ENST00000518743 CENPCQ03188 943 aa7.01□□□□□ -1.29
HMGB1P23-201ENST00000518743 GNASQ5JWF2 1037 aa7.01□□□□□ -1.29
HMGB1P23-201ENST00000518743 TBCELQ5QJ74 424 aa7.01□□□□□ -1.29
HMGB1P23-201ENST00000518743 RHBDD1Q8TEB9 315 aa7.01□□□□□ -1.29
HMGB1P23-201ENST00000518743 RNF34Q969K3 372 aa7.01□□□□□ -1.29
HMGB1P23-201ENST00000518743 IFT43Q96FT9 208 aa7.01□□□□□ -1.29
HMGB1P23-201ENST00000518743 ZSCAN10Q96SZ4 725 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P23-201ENST00000518743 LRFN2Q9ULH4 789 aa7.01□□□□□ -1.29
HMGB1P23-201ENST00000518743 SPG7Q9UQ90 795 aa7.01□□□□□ -1.29
HMGB1P23-201ENST00000518743 PLXNC1O60486 1568 aa7□□□□□ -1.29
HMGB1P23-201ENST00000518743 SAMD9LQ8IVG5 1584 aa7□□□□□ -1.29
HMGB1P23-201ENST00000518743 PNPLA6Q8IY17 1366 aa7□□□□□ -1.29
HMGB1P23-201ENST00000518743 PNMA6FA0A0J9YX94 578 aa7□□□□□ -1.29
HMGB1P23-201ENST00000518743 GIPC1O14908 333 aa7□□□□□ -1.29
HMGB1P23-201ENST00000518743 GPR182O15218 404 aa7□□□□□ -1.29
HMGB1P23-201ENST00000518743 LTKP29376 864 aa7□□□□□ -1.29
HMGB1P23-201ENST00000518743 DNM1Q05193 864 aaKnown RBP7□□□□□ -1.29
HMGB1P23-201ENST00000518743 NNTQ13423 1086 aa7□□□□□ -1.29
HMGB1P23-201ENST00000518743 DGKZQ13574 1117 aa7□□□□□ -1.29
HMGB1P23-201ENST00000518743 NBPF1Q3BBV0 1214 aa7□□□□□ -1.29
HMGB1P23-201ENST00000518743 TMEM214Q6NUQ4 689 aaKnown RBP7□□□□□ -1.29
HMGB1P23-201ENST00000518743 Q6ZVU0 165 aa7□□□□□ -1.29
HMGB1P23-201ENST00000518743 PIK3R5Q8WYR1 880 aa7□□□□□ -1.29
HMGB1P23-201ENST00000518743 MRGPRX2Q96LB1 330 aa7□□□□□ -1.29
HMGB1P23-201ENST00000518743 SLC26A8Q96RN1 970 aa7□□□□□ -1.29
HMGB1P23-201ENST00000518743 NIF3L1Q9GZT8 377 aa7□□□□□ -1.29
HMGB1P23-201ENST00000518743 POLIQ9UNA4 740 aa7□□□□□ -1.29
HMGB1P23-201ENST00000518743 FNDC3AQ9Y2H6 1198 aaKnown RBP7□□□□□ -1.29
HMGB1P23-201ENST00000518743 CDC42BPBQ9Y5S2 1711 aa7□□□□□ -1.29
HMGB1P23-201ENST00000518743 WASHC2CQ9Y4E1 1318 aa7□□□□□ -1.29
HMGB1P23-201ENST00000518743 SAMD9Q5K651 1589 aa6.99□□□□□ -1.29
HMGB1P23-201ENST00000518743 IGHA2P01877 340 aa6.99□□□□□ -1.29
HMGB1P23-201ENST00000518743 PDGFAP04085 211 aa6.99□□□□□ -1.29
HMGB1P23-201ENST00000518743 NR3C2P08235 984 aa6.99□□□□□ -1.29
HMGB1P23-201ENST00000518743 ZNF76P36508 570 aa6.99□□□□□ -1.29
HMGB1P23-201ENST00000518743 NBPF10Q6P3W6 841 aaKnown RBP6.99□□□□□ -1.29
HMGB1P23-201ENST00000518743 Q6ZNB5 142 aa6.99□□□□□ -1.29
HMGB1P23-201ENST00000518743 EDEM1Q92611 657 aa6.99□□□□□ -1.29
HMGB1P23-201ENST00000518743 PHACTR1Q9C0D0 580 aa6.99□□□□□ -1.29
HMGB1P23-201ENST00000518743 FHDC1Q9C0D6 1143 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P23-201ENST00000518743 TGIF2Q9GZN2 237 aa6.99□□□□□ -1.29
HMGB1P23-201ENST00000518743 ANKIB1Q9P2G1 1089 aa6.99□□□□□ -1.29
HMGB1P23-201ENST00000518743 WWC3Q9ULE0 1092 aa6.99□□□□□ -1.29
HMGB1P23-201ENST00000518743 PDZRN3Q9UPQ7 1066 aa6.99□□□□□ -1.29
HMGB1P23-201ENST00000518743 SPHKAPQ2M3C7 1700 aa6.98□□□□□ -1.29
HMGB1P23-201ENST00000518743 UBR1Q8IWV7 1749 aa6.98□□□□□ -1.29
HMGB1P23-201ENST00000518743 RALGAPBQ86X10 1494 aa6.98□□□□□ -1.29
HMGB1P23-201ENST00000518743 ARHGAP23Q9P227 1491 aa6.98□□□□□ -1.29
HMGB1P23-201ENST00000518743 CFAP65Q6ZU64 1925 aaKnown RBP6.98□□□□□ -1.29
HMGB1P23-201ENST00000518743 MEN1O00255 615 aa6.98□□□□□ -1.29
HMGB1P23-201ENST00000518743 KCNQ2O43526 872 aa6.98□□□□□ -1.29
HMGB1P23-201ENST00000518743 ALDH1A1P00352 501 aa6.98□□□□□ -1.29
HMGB1P23-201ENST00000518743 HDLBPQ00341 1268 aaKnown RBP6.98□□□□□ -1.29
HMGB1P23-201ENST00000518743 SPRYD7Q5W111 196 aa6.98□□□□□ -1.29
HMGB1P23-201ENST00000518743 BRINP3Q76B58 766 aa6.98□□□□□ -1.29
HMGB1P23-201ENST00000518743 CRELD1Q96HD1 420 aa6.98□□□□□ -1.29
HMGB1P23-201ENST00000518743 CSRNP1Q96S65 589 aa6.98□□□□□ -1.29
HMGB1P23-201ENST00000518743 CCSER2Q9H7U1 834 aa6.98□□□□□ -1.29
HMGB1P23-201ENST00000518743 NLRP2Q9NX02 1062 aa6.98□□□□□ -1.29
HMGB1P23-201ENST00000518743 ZDHHC3Q9NYG2 299 aa6.98□□□□□ -1.29
HMGB1P23-201ENST00000518743 HCN4Q9Y3Q4 1203 aa6.98□□□□□ -1.29
HMGB1P23-201ENST00000518743 SETD5Q9C0A6 1442 aa6.98□□□□□ -1.29
HMGB1P23-201ENST00000518743 NCOA2Q15596 1464 aa6.98□□□□□ -1.29
HMGB1P23-201ENST00000518743 FAM83GA6ND36 823 aa6.97□□□□□ -1.29
HMGB1P23-201ENST00000518743 RGPD1P0DJD0 1748 aa6.97□□□□□ -1.29
HMGB1P23-201ENST00000518743 TATP17735 454 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P23-201ENST00000518743 IER5Q5VY09 327 aa6.97□□□□□ -1.29
HMGB1P23-201ENST00000518743 TRIM67Q6ZTA4 783 aa6.97□□□□□ -1.29
HMGB1P23-201ENST00000518743 KRT27Q7Z3Y8 459 aa6.97□□□□□ -1.29
HMGB1P23-201ENST00000518743 NT5DC4Q86YG4 428 aa6.97□□□□□ -1.29
HMGB1P23-201ENST00000518743 ETFBKMTQ8IXQ9 262 aa6.97□□□□□ -1.29
HMGB1P23-201ENST00000518743 SLC43A3Q8NBI5 491 aa6.97□□□□□ -1.29
HMGB1P23-201ENST00000518743 SNIP1Q8TAD8 396 aaKnown RBP6.97□□□□□ -1.29
HMGB1P23-201ENST00000518743 MAST1Q9Y2H9 1570 aa6.97□□□□□ -1.29
HMGB1P23-201ENST00000518743 CAMSAP2Q08AD1 1489 aa6.97□□□□□ -1.29
HMGB1P23-201ENST00000518743 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.96□□□□□ -1.29
HMGB1P23-201ENST00000518743 TGFBR3LH3BV60 316 aa6.96□□□□□ -1.3
HMGB1P23-201ENST00000518743 ZBTB39O15060 712 aa6.96□□□□□ -1.3
HMGB1P23-201ENST00000518743 CPNE3O75131 537 aaKnown RBP6.96□□□□□ -1.3
HMGB1P23-201ENST00000518743 HSP90B1P14625 803 aaKnown RBP6.96□□□□□ -1.3
HMGB1P23-201ENST00000518743 HNRNPMP52272 730 aaKnown RBP eCLIP6.96□□□□□ -1.3
HMGB1P23-201ENST00000518743 EZH2Q15910 746 aaKnown RBP6.96□□□□□ -1.3
HMGB1P23-201ENST00000518743 SLC27A3Q5K4L6 730 aa6.96□□□□□ -1.3
HMGB1P23-201ENST00000518743 ZNF697Q5TEC3 545 aa6.96□□□□□ -1.3
HMGB1P23-201ENST00000518743 ATCAYQ86WG3 371 aa6.96□□□□□ -1.3
HMGB1P23-201ENST00000518743 TREML1Q86YW5 311 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms