RNA–Protein interactions for RNA: ENST00000517671.5

NPM1-204, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-204ENST00000517671 TNS1Q9HBL0 1735 aaKnown RBP11.2□□□□□ -0.62
NPM1-204ENST00000517671 ATP5J2-PTCD1G3V325 749 aa11.2□□□□□ -0.62
NPM1-204ENST00000517671 HMGB2P26583 209 aaKnown RBP11.2□□□□□ -0.62
NPM1-204ENST00000517671 RELBQ01201 579 aa11.2□□□□□ -0.62
NPM1-204ENST00000517671 CYP2U1Q7Z449 544 aa11.2□□□□□ -0.62
NPM1-204ENST00000517671 AGBL1Q96MI9 1066 aa11.2□□□□□ -0.62
NPM1-204ENST00000517671 ZFP42Q96MM3 310 aa11.2□□□□□ -0.62
NPM1-204ENST00000517671 CAMTA1Q9Y6Y1 1673 aa11.2□□□□□ -0.62
NPM1-204ENST00000517671 RAB3GAP2Q9H2M9 1393 aa11.2□□□□□ -0.62
NPM1-204ENST00000517671 SCTRP47872 440 aa11.19□□□□□ -0.62
NPM1-204ENST00000517671 EML3Q32P44 896 aa11.19□□□□□ -0.62
NPM1-204ENST00000517671 CARD10Q9BWT7 1032 aa11.19□□□□□ -0.62
NPM1-204ENST00000517671 MTFR1LQ9H019 292 aa11.19□□□□□ -0.62
NPM1-204ENST00000517671 COL5A2P05997 1499 aaPredicted RBP11.19□□□□□ -0.62
NPM1-204ENST00000517671 WDR17Q8IZU2 1322 aa11.19□□□□□ -0.62
NPM1-204ENST00000517671 SLC15A2Q16348 729 aa11.18□□□□□ -0.62
NPM1-204ENST00000517671 ITSN1Q15811 1721 aa11.18□□□□□ -0.62
NPM1-204ENST00000517671 CENPJQ9HC77 1338 aaPredicted RBP11.18□□□□□ -0.62
NPM1-204ENST00000517671 ATP9BO43861 1147 aa11.17□□□□□ -0.62
NPM1-204ENST00000517671 PTGIRP43119 386 aa11.17□□□□□ -0.62
NPM1-204ENST00000517671 TXNRD1Q16881 649 aa11.17□□□□□ -0.62
NPM1-204ENST00000517671 SYT17Q9BSW7 474 aa11.17□□□□□ -0.62
NPM1-204ENST00000517671 ZNF395Q9H8N7 513 aaPredicted RBP11.17□□□□□ -0.62
NPM1-204ENST00000517671 PPIP5K1Q6PFW1 1433 aa11.17□□□□□ -0.62
NPM1-204ENST00000517671 CSB-PGBD3P0DP91 1061 aa11.16□□□□□ -0.62
NPM1-204ENST00000517671 TBC1D9Q6ZT07 1266 aa11.16□□□□□ -0.62
NPM1-204ENST00000517671 OSBPL3Q9H4L5 887 aa11.16□□□□□ -0.62
NPM1-204ENST00000517671 CABP1Q9NZU7 370 aa11.16□□□□□ -0.62
NPM1-204ENST00000517671 TFIP11Q9UBB9 837 aaKnown RBP11.16□□□□□ -0.62
NPM1-204ENST00000517671 NOD1Q9Y239 953 aa11.16□□□□□ -0.62
NPM1-204ENST00000517671 EVC2Q86UK5 1308 aa11.16□□□□□ -0.62
NPM1-204ENST00000517671 CCDC7Q96M83 1385 aa11.15□□□□□ -0.62
NPM1-204ENST00000517671 USP17L5A8MUK1 530 aa11.15□□□□□ -0.62
NPM1-204ENST00000517671 ARHGEF25Q86VW2 580 aa11.15□□□□□ -0.62
NPM1-204ENST00000517671 SLC16A10Q8TF71 515 aa11.15□□□□□ -0.62
NPM1-204ENST00000517671 UCN2Q96RP3 112 aa11.15□□□□□ -0.62
NPM1-204ENST00000517671 CRYBG1Q9Y4K1 1723 aa11.15□□□□□ -0.62
NPM1-204ENST00000517671 TTC21AQ8NDW8 1320 aa11.15□□□□□ -0.62
NPM1-204ENST00000517671 RREB1Q92766 1687 aa11.15□□□□□ -0.62
NPM1-204ENST00000517671 ZBTB7CA1YPR0 619 aa11.14□□□□□ -0.63
NPM1-204ENST00000517671 SPINT1O43278 529 aa11.14□□□□□ -0.63
NPM1-204ENST00000517671 ZBTB7AO95365 584 aa11.14□□□□□ -0.63
NPM1-204ENST00000517671 NCOA4Q13772 614 aa11.14□□□□□ -0.63
NPM1-204ENST00000517671 MARCH10Q8NA82 808 aaPredicted RBP11.14□□□□□ -0.63
NPM1-204ENST00000517671 PPP1R12CQ9BZL4 782 aa11.14□□□□□ -0.63
NPM1-204ENST00000517671 PHRF1Q9P1Y6 1649 aaKnown RBP11.14□□□□□ -0.63
NPM1-204ENST00000517671 MAP3K5Q99683 1374 aa11.14□□□□□ -0.63
NPM1-204ENST00000517671 GNRH1P01148 92 aa11.13□□□□□ -0.63
NPM1-204ENST00000517671 C1QTNF8P60827 252 aa11.13□□□□□ -0.63
NPM1-204ENST00000517671 DEPDC4Q8N2C3 294 aa11.13□□□□□ -0.63
NPM1-204ENST00000517671 NLRP3Q96P20 1036 aa11.13□□□□□ -0.63
NPM1-204ENST00000517671 ARXQ96QS3 562 aa11.13□□□□□ -0.63
NPM1-204ENST00000517671 FHDC1Q9C0D6 1143 aaPredicted RBP11.13□□□□□ -0.63
NPM1-204ENST00000517671 POLMQ9NP87 494 aaPredicted RBP11.13□□□□□ -0.63
NPM1-204ENST00000517671 USP6P35125 1406 aa11.13□□□□□ -0.63
NPM1-204ENST00000517671 NRKQ7Z2Y5 1582 aa11.13□□□□□ -0.63
NPM1-204ENST00000517671 LMO7Q8WWI1 1683 aa11.13□□□□□ -0.63
NPM1-204ENST00000517671 PALM3A6NDB9 673 aaPredicted RBP11.12□□□□□ -0.63
NPM1-204ENST00000517671 MEN1O00255 615 aa11.12□□□□□ -0.63
NPM1-204ENST00000517671 PLEKHM2Q8IWE5 1019 aa11.12□□□□□ -0.63
NPM1-204ENST00000517671 PARP4Q9UKK3 1724 aaKnown RBP11.12□□□□□ -0.63
NPM1-204ENST00000517671 RGPD3A6NKT7 1758 aaPredicted RBP11.12□□□□□ -0.63
NPM1-204ENST00000517671 RGPD4Q7Z3J3 1758 aa11.12□□□□□ -0.63
NPM1-204ENST00000517671 NUP188Q5SRE5 1749 aa11.12□□□□□ -0.63
NPM1-204ENST00000517671 A0A1W2PRU2 124 aa11.11□□□□□ -0.63
NPM1-204ENST00000517671 USP17L3A6NCW0 530 aa11.11□□□□□ -0.63
NPM1-204ENST00000517671 USP17L4A6NCW7 530 aa11.11□□□□□ -0.63
NPM1-204ENST00000517671 MAN1A2O60476 641 aa11.11□□□□□ -0.63
NPM1-204ENST00000517671 POLD1P28340 1107 aa11.11□□□□□ -0.63
NPM1-204ENST00000517671 SLC27A3Q5K4L6 730 aa11.11□□□□□ -0.63
NPM1-204ENST00000517671 USP17L2Q6R6M4 530 aa11.11□□□□□ -0.63
NPM1-204ENST00000517671 USP17L1Q7RTZ2 530 aa11.11□□□□□ -0.63
NPM1-204ENST00000517671 TRIM50Q86XT4 487 aa11.11□□□□□ -0.63
NPM1-204ENST00000517671 INSM2Q96T92 566 aaPredicted RBP11.11□□□□□ -0.63
NPM1-204ENST00000517671 SENP3-EIF4A1A0A087X0R7 540 aa11.1□□□□□ -0.63
NPM1-204ENST00000517671 TTLL8A6PVC2 850 aa11.1□□□□□ -0.63
NPM1-204ENST00000517671 NBPF1Q3BBV0 1214 aa11.1□□□□□ -0.63
NPM1-204ENST00000517671 CCDC97Q96F63 343 aaPredicted RBP11.1□□□□□ -0.63
NPM1-204ENST00000517671 TTC21BQ7Z4L5 1316 aa11.1□□□□□ -0.63
NPM1-204ENST00000517671 CPSF1Q10570 1443 aaKnown RBP11.1□□□□□ -0.63
NPM1-204ENST00000517671 UTRNP46939 3433 aa11.1□□□□□ -0.63
NPM1-204ENST00000517671 LMOD1P29536 600 aaPredicted RBP11.09□□□□□ -0.63
NPM1-204ENST00000517671 GPR162Q16538 588 aa11.09□□□□□ -0.63
NPM1-204ENST00000517671 KDF1Q8NAX2 398 aaPredicted RBP11.09□□□□□ -0.63
NPM1-204ENST00000517671 ARHGEF10LQ9HCE6 1279 aa11.09□□□□□ -0.63
NPM1-204ENST00000517671 SLIT3O75094 1523 aa11.09□□□□□ -0.63
NPM1-204ENST00000517671 GRIN3BO60391 1043 aa11.09□□□□□ -0.63
NPM1-204ENST00000517671 IL2RBP14784 551 aa11.09□□□□□ -0.63
NPM1-204ENST00000517671 ATP1A2P50993 1020 aa11.09□□□□□ -0.63
NPM1-204ENST00000517671 MKRN1Q9UHC7 482 aaKnown RBP11.09□□□□□ -0.63
NPM1-204ENST00000517671 SERPINA10Q9UK55 444 aa11.09□□□□□ -0.63
NPM1-204ENST00000517671 TIMELESSQ9UNS1 1208 aa11.09□□□□□ -0.63
NPM1-204ENST00000517671 MAFBQ9Y5Q3 323 aaPredicted RBP11.09□□□□□ -0.63
NPM1-204ENST00000517671 ARHGEF28Q8N1W1 1705 aaKnown RBP11.08□□□□□ -0.64
NPM1-204ENST00000517671 CTSOP43234 321 aaPredicted RBP11.08□□□□□ -0.64
NPM1-204ENST00000517671 GTF2IP78347 998 aa11.08□□□□□ -0.64
NPM1-204ENST00000517671 CLN3Q13286 438 aa11.08□□□□□ -0.64
NPM1-204ENST00000517671 RAB6BQ9NRW1 208 aa11.08□□□□□ -0.64
NPM1-204ENST00000517671 KIAA1210Q9ULL0 1709 aa11.07□□□□□ -0.64
NPM1-204ENST00000517671 TOPAZ1Q8N9V7 1692 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms