RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 MSNP26038 577 aaKnown RBP6□□□□□ -1.45
HMGB1P19-201ENST00000517578 MCM5P33992 734 aa6□□□□□ -1.45
HMGB1P19-201ENST00000517578 SEC13P55735 322 aa6□□□□□ -1.45
HMGB1P19-201ENST00000517578 USP17L24Q0WX57 530 aa6□□□□□ -1.45
HMGB1P19-201ENST00000517578 DPYDQ12882 1025 aa6□□□□□ -1.45
HMGB1P19-201ENST00000517578 BTLAQ7Z6A9 289 aa6□□□□□ -1.45
HMGB1P19-201ENST00000517578 CREBRFQ8IUR6 639 aa6□□□□□ -1.45
HMGB1P19-201ENST00000517578 STAG2Q8N3U4 1231 aa6□□□□□ -1.45
HMGB1P19-201ENST00000517578 BHMTQ93088 406 aa6□□□□□ -1.45
HMGB1P19-201ENST00000517578 PSMD1Q99460 953 aa6□□□□□ -1.45
HMGB1P19-201ENST00000517578 HINFPQ9BQA5 517 aa6□□□□□ -1.45
HMGB1P19-201ENST00000517578 TNIKQ9UKE5 1360 aa6□□□□□ -1.45
HMGB1P19-201ENST00000517578 RNF123Q5XPI4 1314 aa5.99□□□□□ -1.45
HMGB1P19-201ENST00000517578 DHX57Q6P158 1386 aaKnown RBP5.99□□□□□ -1.45
HMGB1P19-201ENST00000517578 ATAD2Q6PL18 1390 aa5.99□□□□□ -1.45
HMGB1P19-201ENST00000517578 FSD2A1L4K1 749 aa5.99□□□□□ -1.45
HMGB1P19-201ENST00000517578 DYRK3O43781 588 aa5.99□□□□□ -1.45
HMGB1P19-201ENST00000517578 ZSCAN20P17040 1043 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P19-201ENST00000517578 TRIM28Q13263 835 aaKnown RBP5.99□□□□□ -1.45
HMGB1P19-201ENST00000517578 PTK7Q13308 1070 aa5.99□□□□□ -1.45
HMGB1P19-201ENST00000517578 ZMYM1Q5SVZ6 1142 aa5.99□□□□□ -1.45
HMGB1P19-201ENST00000517578 ANKMY2Q8IV38 441 aa5.99□□□□□ -1.45
HMGB1P19-201ENST00000517578 RBM28Q9NW13 759 aaKnown RBP5.99□□□□□ -1.45
HMGB1P19-201ENST00000517578 ZHX1Q9UKY1 873 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P19-201ENST00000517578 NINLQ9Y2I6 1382 aa5.98□□□□□ -1.45
HMGB1P19-201ENST00000517578 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P19-201ENST00000517578 FAM196BA6NMK8 535 aa5.98□□□□□ -1.45
HMGB1P19-201ENST00000517578 HSP90AB3PQ58FF7 597 aa5.98□□□□□ -1.45
HMGB1P19-201ENST00000517578 SCG3Q8WXD2 468 aaKnown RBP5.98□□□□□ -1.45
HMGB1P19-201ENST00000517578 PUS7Q96PZ0 661 aaKnown RBP5.98□□□□□ -1.45
HMGB1P19-201ENST00000517578 NACC1Q96RE7 527 aa5.98□□□□□ -1.45
HMGB1P19-201ENST00000517578 UBE2OQ9C0C9 1292 aaKnown RBP5.98□□□□□ -1.45
HMGB1P19-201ENST00000517578 FAM13BQ9NYF5 915 aa5.98□□□□□ -1.45
HMGB1P19-201ENST00000517578 SERPINA10Q9UK55 444 aa5.98□□□□□ -1.45
HMGB1P19-201ENST00000517578 SLC6A14Q9UN76 642 aa5.98□□□□□ -1.45
HMGB1P19-201ENST00000517578 KIF3AQ9Y496 699 aa5.98□□□□□ -1.45
HMGB1P19-201ENST00000517578 CEP162Q5TB80 1403 aa5.98□□□□□ -1.45
HMGB1P19-201ENST00000517578 SMG6Q86US8 1419 aaKnown RBP5.98□□□□□ -1.45
HMGB1P19-201ENST00000517578 A0A0A0MRY4 1105 aa5.97□□□□□ -1.45
HMGB1P19-201ENST00000517578 LILRB5O75023 590 aa5.97□□□□□ -1.45
HMGB1P19-201ENST00000517578 FRAT2O75474 233 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P19-201ENST00000517578 XRCC6P12956 609 aaKnown RBP eCLIP5.97□□□□□ -1.45
HMGB1P19-201ENST00000517578 SELPP16109 830 aa5.97□□□□□ -1.45
HMGB1P19-201ENST00000517578 GRNP28799 593 aaKnown RBP5.97□□□□□ -1.45
HMGB1P19-201ENST00000517578 IRX6P78412 446 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P19-201ENST00000517578 HMGN5P82970 282 aaKnown RBP5.97□□□□□ -1.45
HMGB1P19-201ENST00000517578 TBC1D8BQ0IIM8 1120 aa5.97□□□□□ -1.45
HMGB1P19-201ENST00000517578 CCDC173Q0VFZ6 552 aa5.97□□□□□ -1.45
HMGB1P19-201ENST00000517578 ADGRE1Q14246 886 aa5.97□□□□□ -1.45
HMGB1P19-201ENST00000517578 ILDR2Q71H61 639 aa5.97□□□□□ -1.45
HMGB1P19-201ENST00000517578 ZSCAN30Q86W11 494 aa5.97□□□□□ -1.45
HMGB1P19-201ENST00000517578 CCDC82Q8N4S0 544 aa5.97□□□□□ -1.45
HMGB1P19-201ENST00000517578 GAS2L2Q8NHY3 880 aa5.97□□□□□ -1.45
HMGB1P19-201ENST00000517578 CHMP7Q8WUX9 453 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P19-201ENST00000517578 NGLY1Q96IV0 654 aa5.97□□□□□ -1.45
HMGB1P19-201ENST00000517578 GSX2Q9BZM3 304 aa5.97□□□□□ -1.45
HMGB1P19-201ENST00000517578 CALCOCO1Q9P1Z2 691 aa5.97□□□□□ -1.45
HMGB1P19-201ENST00000517578 DMGDHQ9UI17 866 aaKnown RBP5.97□□□□□ -1.45
HMGB1P19-201ENST00000517578 NAGPAQ9UK23 515 aa5.97□□□□□ -1.45
HMGB1P19-201ENST00000517578 BCS1LQ9Y276 419 aa5.97□□□□□ -1.45
HMGB1P19-201ENST00000517578 NACADO15069 1562 aa5.97□□□□□ -1.45
HMGB1P19-201ENST00000517578 SSR1P43307 286 aaKnown RBP5.96□□□□□ -1.46
HMGB1P19-201ENST00000517578 MBTPS1Q14703 1052 aa5.96□□□□□ -1.46
HMGB1P19-201ENST00000517578 SKOR2Q2VWA4 1001 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P19-201ENST00000517578 TRAPPC3LQ5T215 181 aa5.96□□□□□ -1.46
HMGB1P19-201ENST00000517578 IER5Q5VY09 327 aa5.96□□□□□ -1.46
HMGB1P19-201ENST00000517578 PDCL2Q8N4E4 241 aa5.96□□□□□ -1.46
HMGB1P19-201ENST00000517578 FAM200AQ8TCP9 573 aa5.96□□□□□ -1.46
HMGB1P19-201ENST00000517578 TIGD1Q96MW7 591 aa5.96□□□□□ -1.46
HMGB1P19-201ENST00000517578 JPH1Q9HDC5 661 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P19-201ENST00000517578 NOVA2Q9UNW9 492 aaKnown RBP5.96□□□□□ -1.46
HMGB1P19-201ENST00000517578 TGFBR3LH3BV60 316 aa5.95□□□□□ -1.46
HMGB1P19-201ENST00000517578 ELNP15502 786 aa5.95□□□□□ -1.46
HMGB1P19-201ENST00000517578 AFF1P51825 1210 aaKnown RBP5.95□□□□□ -1.46
HMGB1P19-201ENST00000517578 GABPB1Q06547 395 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P19-201ENST00000517578 HIF1AQ16665 826 aa5.95□□□□□ -1.46
HMGB1P19-201ENST00000517578 RTN1Q16799 776 aa5.95□□□□□ -1.46
HMGB1P19-201ENST00000517578 SHISA2Q6UWI4 295 aa5.95□□□□□ -1.46
HMGB1P19-201ENST00000517578 NUDT8Q8WV74 236 aa5.95□□□□□ -1.46
HMGB1P19-201ENST00000517578 PSMG3-AS1Q96PY0 264 aa5.95□□□□□ -1.46
HMGB1P19-201ENST00000517578 FEZ1Q99689 392 aa5.95□□□□□ -1.46
HMGB1P19-201ENST00000517578 IGFLR1Q9H665 355 aa5.95□□□□□ -1.46
HMGB1P19-201ENST00000517578 C1orf115Q9H7X2 142 aa5.95□□□□□ -1.46
HMGB1P19-201ENST00000517578 DNAJB12Q9NXW2 375 aaKnown RBP5.95□□□□□ -1.46
HMGB1P19-201ENST00000517578 C9orf172C9J069 976 aa5.94□□□□□ -1.46
HMGB1P19-201ENST00000517578 ZNF500O60304 480 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P19-201ENST00000517578 NFKB1P19838 968 aa5.94□□□□□ -1.46
HMGB1P19-201ENST00000517578 TNNT3P45378 269 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P19-201ENST00000517578 LMOD3Q0VAK6 560 aa5.94□□□□□ -1.46
HMGB1P19-201ENST00000517578 PRSS36Q5K4E3 855 aa5.94□□□□□ -1.46
HMGB1P19-201ENST00000517578 PSAPL1Q6NUJ1 521 aa5.94□□□□□ -1.46
HMGB1P19-201ENST00000517578 SASS6Q6UVJ0 657 aa5.94□□□□□ -1.46
HMGB1P19-201ENST00000517578 MNS1Q8NEH6 495 aa5.94□□□□□ -1.46
HMGB1P19-201ENST00000517578 MFAP1P55081 439 aaKnown RBP5.93□□□□□ -1.46
HMGB1P19-201ENST00000517578 CCINQ13939 588 aa5.93□□□□□ -1.46
HMGB1P19-201ENST00000517578 FMR1NBQ8N0W7 255 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P19-201ENST00000517578 LENG1Q96BZ8 264 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P19-201ENST00000517578 PRIMPOLQ96LW4 560 aa5.93□□□□□ -1.46
HMGB1P19-201ENST00000517578 GRPEL1Q9HAV7 217 aa5.93□□□□□ -1.46
HMGB1P19-201ENST00000517578 BRMS1Q9HCU9 246 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms