RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 LRRC37AA6NMS7 1700 aa19.76■□□□□ 0.75
CSGALNACT1-204ENST00000517494 DDX60Q8IY21 1712 aaKnown RBP19.76■□□□□ 0.75
CSGALNACT1-204ENST00000517494 RTL9Q8NET4 1388 aa19.76■□□□□ 0.75
CSGALNACT1-204ENST00000517494 RPS12P25398 132 aaKnown RBP19.76■□□□□ 0.75
CSGALNACT1-204ENST00000517494 RPS8P62241 208 aaKnown RBP19.76■□□□□ 0.75
CSGALNACT1-204ENST00000517494 DGKZQ13574 1117 aa19.76■□□□□ 0.75
CSGALNACT1-204ENST00000517494 KIF4BQ2VIQ3 1234 aa19.76■□□□□ 0.75
CSGALNACT1-204ENST00000517494 TBC1D16Q8TBP0 767 aa19.76■□□□□ 0.75
CSGALNACT1-204ENST00000517494 GBA2Q9HCG7 927 aaPredicted RBP19.76■□□□□ 0.75
CSGALNACT1-204ENST00000517494 ANKIB1Q9P2G1 1089 aa19.76■□□□□ 0.75
CSGALNACT1-204ENST00000517494 COL4A1P02462 1669 aa19.75■□□□□ 0.75
CSGALNACT1-204ENST00000517494 UFL1O94874 794 aa19.75■□□□□ 0.75
CSGALNACT1-204ENST00000517494 C2orf69Q8N8R5 385 aa19.75■□□□□ 0.75
CSGALNACT1-204ENST00000517494 CCDC85AQ96PX6 553 aaPredicted RBP19.75■□□□□ 0.75
CSGALNACT1-204ENST00000517494 ZC3H12CQ9C0D7 883 aaKnown RBP19.75■□□□□ 0.75
CSGALNACT1-204ENST00000517494 SEC31BQ9NQW1 1179 aa19.75■□□□□ 0.75
CSGALNACT1-204ENST00000517494 MBIPQ9NS73 344 aa19.75■□□□□ 0.75
CSGALNACT1-204ENST00000517494 ADAMTS8Q9UP79 889 aa19.75■□□□□ 0.75
CSGALNACT1-204ENST00000517494 ELL2O00472 640 aaPredicted RBP19.74■□□□□ 0.75
CSGALNACT1-204ENST00000517494 RGMBQ6NW40 437 aa19.74■□□□□ 0.75
CSGALNACT1-204ENST00000517494 MYD88Q99836 296 aa19.74■□□□□ 0.75
CSGALNACT1-204ENST00000517494 ZNF157P51786 506 aaPredicted RBP19.73■□□□□ 0.75
CSGALNACT1-204ENST00000517494 SULF1Q8IWU6 871 aa19.73■□□□□ 0.75
CSGALNACT1-204ENST00000517494 ZBTB38Q8NAP3 1195 aaPredicted RBP19.73■□□□□ 0.75
CSGALNACT1-204ENST00000517494 JARID2Q92833 1246 aaPredicted RBP19.73■□□□□ 0.75
CSGALNACT1-204ENST00000517494 PHAXQ9H814 394 aaKnown RBP19.73■□□□□ 0.75
CSGALNACT1-204ENST00000517494 GGA3Q9NZ52 723 aa19.73■□□□□ 0.75
CSGALNACT1-204ENST00000517494 GGA1Q9UJY5 639 aa19.73■□□□□ 0.75
CSGALNACT1-204ENST00000517494 HSP90B1P14625 803 aaKnown RBP19.71■□□□□ 0.75
CSGALNACT1-204ENST00000517494 TRIM28Q13263 835 aaKnown RBP19.71■□□□□ 0.75
CSGALNACT1-204ENST00000517494 CCDC152Q4G0S7 254 aa19.71■□□□□ 0.75
CSGALNACT1-204ENST00000517494 ASTN2O75129 1339 aaPredicted RBP19.71■□□□□ 0.75
CSGALNACT1-204ENST00000517494 FAM155AB1AL88 458 aaPredicted RBP19.7■□□□□ 0.74
CSGALNACT1-204ENST00000517494 KIF23Q02241 960 aaPredicted RBP19.7■□□□□ 0.74
CSGALNACT1-204ENST00000517494 CCDC102AQ96A19 550 aa19.7■□□□□ 0.74
CSGALNACT1-204ENST00000517494 VIL1P09327 827 aaKnown RBP19.69■□□□□ 0.74
CSGALNACT1-204ENST00000517494 PODXL2Q9NZ53 605 aa19.69■□□□□ 0.74
CSGALNACT1-204ENST00000517494 ANGEL2Q5VTE6 544 aaKnown RBP19.68■□□□□ 0.74
CSGALNACT1-204ENST00000517494 CDCA5Q96FF9 252 aa19.68■□□□□ 0.74
CSGALNACT1-204ENST00000517494 CWC25Q9NXE8 425 aaPredicted RBP19.68■□□□□ 0.74
CSGALNACT1-204ENST00000517494 CASP8AP2Q9UKL3 1982 aa19.68■□□□□ 0.74
CSGALNACT1-204ENST00000517494 APAF1O14727 1248 aa19.67■□□□□ 0.74
CSGALNACT1-204ENST00000517494 PDE8AO60658 829 aa19.67■□□□□ 0.74
CSGALNACT1-204ENST00000517494 TRPA1O75762 1119 aa19.67■□□□□ 0.74
CSGALNACT1-204ENST00000517494 PCCAP05165 728 aaPredicted RBP19.67■□□□□ 0.74
CSGALNACT1-204ENST00000517494 SCARF1Q14162 830 aa19.67■□□□□ 0.74
CSGALNACT1-204ENST00000517494 RSBN1LQ6PCB5 846 aaPredicted RBP19.67■□□□□ 0.74
CSGALNACT1-204ENST00000517494 ANKRD18AQ8IVF6 992 aa19.67■□□□□ 0.74
CSGALNACT1-204ENST00000517494 CCDC191Q8NCU4 936 aa19.67■□□□□ 0.74
CSGALNACT1-204ENST00000517494 IFT57Q9NWB7 429 aa19.67■□□□□ 0.74
CSGALNACT1-204ENST00000517494 DDX58O95786 925 aaKnown RBP19.66■□□□□ 0.74
CSGALNACT1-204ENST00000517494 RGS19P49795 217 aa19.66■□□□□ 0.74
CSGALNACT1-204ENST00000517494 GNAI1P63096 354 aa19.66■□□□□ 0.74
CSGALNACT1-204ENST00000517494 CALD1Q05682 793 aaKnown RBP19.66■□□□□ 0.74
CSGALNACT1-204ENST00000517494 SLC10A3P09131 477 aa19.65■□□□□ 0.74
CSGALNACT1-204ENST00000517494 ZNF853P0CG23 659 aa19.65■□□□□ 0.74
CSGALNACT1-204ENST00000517494 AGBL3Q8NEM8 1001 aa19.65■□□□□ 0.74
CSGALNACT1-204ENST00000517494 FBXW7Q969H0 707 aa19.65■□□□□ 0.74
CSGALNACT1-204ENST00000517494 RNF186Q9NXI6 227 aa19.65■□□□□ 0.74
CSGALNACT1-204ENST00000517494 SAGE1Q9NXZ1 904 aa19.65■□□□□ 0.74
CSGALNACT1-204ENST00000517494 SCAF8Q9UPN6 1271 aaKnown RBP19.65■□□□□ 0.74
CSGALNACT1-204ENST00000517494 XDHP47989 1333 aa19.65■□□□□ 0.74
CSGALNACT1-204ENST00000517494 USP17L8P0C7I0 530 aa19.64■□□□□ 0.73
CSGALNACT1-204ENST00000517494 ZNF280AP59817 542 aaPredicted RBP19.64■□□□□ 0.73
CSGALNACT1-204ENST00000517494 C8orf58Q8NAV2 365 aa19.64■□□□□ 0.73
CSGALNACT1-204ENST00000517494 METTL22Q9BUU2 404 aaPredicted RBP19.64■□□□□ 0.73
CSGALNACT1-204ENST00000517494 ATP2B4P23634 1241 aa19.63■□□□□ 0.73
CSGALNACT1-204ENST00000517494 MYOZ2Q9NPC6 264 aa19.63■□□□□ 0.73
CSGALNACT1-204ENST00000517494 MAP3K2Q9Y2U5 619 aa19.63■□□□□ 0.73
CSGALNACT1-204ENST00000517494 SCN9AQ15858 1988 aa19.63■□□□□ 0.73
CSGALNACT1-204ENST00000517494 USP17L3A6NCW0 530 aa19.62■□□□□ 0.73
CSGALNACT1-204ENST00000517494 USP17L4A6NCW7 530 aa19.62■□□□□ 0.73
CSGALNACT1-204ENST00000517494 CCDC30Q5VVM6 783 aa19.62■□□□□ 0.73
CSGALNACT1-204ENST00000517494 USP17L1Q7RTZ2 530 aa19.62■□□□□ 0.73
CSGALNACT1-204ENST00000517494 CSRNP1Q96S65 589 aa19.62■□□□□ 0.73
CSGALNACT1-204ENST00000517494 CDC5LQ99459 802 aaKnown RBP19.62■□□□□ 0.73
CSGALNACT1-204ENST00000517494 SLC34A2O95436 690 aa19.61■□□□□ 0.73
CSGALNACT1-204ENST00000517494 CTSWP56202 376 aa19.61■□□□□ 0.73
CSGALNACT1-204ENST00000517494 SOX10P56693 466 aa19.61■□□□□ 0.73
CSGALNACT1-204ENST00000517494 RASAL3Q86YV0 1011 aa19.61■□□□□ 0.73
CSGALNACT1-204ENST00000517494 WTIPA6NIX2 430 aaPredicted RBP19.6■□□□□ 0.73
CSGALNACT1-204ENST00000517494 TTLL12Q14166 644 aaPredicted RBP19.6■□□□□ 0.73
CSGALNACT1-204ENST00000517494 MOB2Q70IA6 237 aa19.6■□□□□ 0.73
CSGALNACT1-204ENST00000517494 PRAMEF18Q5VWM3 479 aa19.59■□□□□ 0.73
CSGALNACT1-204ENST00000517494 PODNQ7Z5L7 613 aa19.59■□□□□ 0.73
CSGALNACT1-204ENST00000517494 GMLQ99445 158 aa19.59■□□□□ 0.73
CSGALNACT1-204ENST00000517494 MXD3Q9BW11 206 aa19.59■□□□□ 0.73
CSGALNACT1-204ENST00000517494 GREM2Q9H772 168 aa19.59■□□□□ 0.73
CSGALNACT1-204ENST00000517494 PRKRIP1Q9H875 184 aaPredicted RBP19.59■□□□□ 0.73
CSGALNACT1-204ENST00000517494 POLR2AP24928 1970 aaKnown RBP19.59■□□□□ 0.73
CSGALNACT1-204ENST00000517494 ZNF609O15014 1411 aa19.59■□□□□ 0.73
CSGALNACT1-204ENST00000517494 PI4KAP2A4QPH2 592 aa19.58■□□□□ 0.72
CSGALNACT1-204ENST00000517494 FKBP1BP68106 108 aa19.58■□□□□ 0.72
CSGALNACT1-204ENST00000517494 NEXNQ0ZGT2 675 aa19.58■□□□□ 0.72
CSGALNACT1-204ENST00000517494 TSPYL6Q8N831 410 aa19.58■□□□□ 0.72
CSGALNACT1-204ENST00000517494 PI4KAP1Q8N8J0 262 aa19.58■□□□□ 0.72
CSGALNACT1-204ENST00000517494 CHMP4AQ9BY43 222 aa19.58■□□□□ 0.72
CSGALNACT1-204ENST00000517494 PITPNM2Q9BZ72 1349 aa19.57■□□□□ 0.72
CSGALNACT1-204ENST00000517494 UBE2Q2LH0YL09 131 aa19.57■□□□□ 0.72
CSGALNACT1-204ENST00000517494 IGKV5-2P06315 115 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms