RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 VARS2Q5ST30 1063 aaKnown RBP7.48□□□□□ -1.21
SCARNA6.1-201ENST00000516989 INTS5Q6P9B9 1019 aaKnown RBP7.48□□□□□ -1.21
SCARNA6.1-201ENST00000516989 COL23A1Q86Y22 540 aaPredicted RBP7.48□□□□□ -1.21
SCARNA6.1-201ENST00000516989 GZF1Q9H116 711 aaPredicted RBP7.48□□□□□ -1.21
SCARNA6.1-201ENST00000516989 CCDC87Q9NVE4 849 aa7.48□□□□□ -1.21
SCARNA6.1-201ENST00000516989 VPS9D1Q9Y2B5 631 aa7.48□□□□□ -1.21
SCARNA6.1-201ENST00000516989 DLG5Q8TDM6 1919 aa7.48□□□□□ -1.21
SCARNA6.1-201ENST00000516989 MRC1P22897 1456 aa7.48□□□□□ -1.21
SCARNA6.1-201ENST00000516989 RNF40O75150 1001 aa7.47□□□□□ -1.21
SCARNA6.1-201ENST00000516989 RPS6KA4O75676 772 aa7.47□□□□□ -1.21
SCARNA6.1-201ENST00000516989 DUSP27Q5VZP5 1158 aa7.47□□□□□ -1.21
SCARNA6.1-201ENST00000516989 C8orf58Q8NAV2 365 aa7.47□□□□□ -1.21
SCARNA6.1-201ENST00000516989 FLAD1Q8NFF5 587 aa7.47□□□□□ -1.21
SCARNA6.1-201ENST00000516989 PDGFDQ9GZP0 370 aaPredicted RBP7.47□□□□□ -1.21
SCARNA6.1-201ENST00000516989 MYH16Q9H6N6 1097 aa7.47□□□□□ -1.21
SCARNA6.1-201ENST00000516989 ZBTB1Q9Y2K1 713 aa7.47□□□□□ -1.21
SCARNA6.1-201ENST00000516989 IL16Q14005 1332 aa7.47□□□□□ -1.21
SCARNA6.1-201ENST00000516989 CNTNAP4Q9C0A0 1308 aa7.47□□□□□ -1.21
SCARNA6.1-201ENST00000516989 EP400Q96L91 3159 aa7.47□□□□□ -1.21
SCARNA6.1-201ENST00000516989 A0A087WZG4 1122 aa7.46□□□□□ -1.22
SCARNA6.1-201ENST00000516989 PALM3A6NDB9 673 aaPredicted RBP7.46□□□□□ -1.22
SCARNA6.1-201ENST00000516989 E9PSI1 815 aa7.46□□□□□ -1.22
SCARNA6.1-201ENST00000516989 ZBTB7AO95365 584 aa7.46□□□□□ -1.22
SCARNA6.1-201ENST00000516989 MYL6BP14649 208 aa7.46□□□□□ -1.22
SCARNA6.1-201ENST00000516989 RFC4P35249 363 aa7.46□□□□□ -1.22
SCARNA6.1-201ENST00000516989 EXOSC9Q06265 439 aaKnown RBP7.46□□□□□ -1.22
SCARNA6.1-201ENST00000516989 SLFN5Q08AF3 891 aa7.46□□□□□ -1.22
SCARNA6.1-201ENST00000516989 LAPTM4BQ86VI4 370 aa7.46□□□□□ -1.22
SCARNA6.1-201ENST00000516989 AMIGO3Q86WK7 504 aa7.46□□□□□ -1.22
SCARNA6.1-201ENST00000516989 YTHDC1Q96MU7 727 aaKnown RBP7.46□□□□□ -1.22
SCARNA6.1-201ENST00000516989 TFIP11Q9UBB9 837 aaKnown RBP7.46□□□□□ -1.22
SCARNA6.1-201ENST00000516989 ADAMTS7Q9UKP4 1686 aa7.46□□□□□ -1.22
SCARNA6.1-201ENST00000516989 ZNF521Q96K83 1311 aa7.46□□□□□ -1.22
SCARNA6.1-201ENST00000516989 TCERG1O14776 1098 aaKnown RBP7.45□□□□□ -1.22
SCARNA6.1-201ENST00000516989 ZPR1O75312 459 aa7.45□□□□□ -1.22
SCARNA6.1-201ENST00000516989 SSFA2P28290 1259 aa7.45□□□□□ -1.22
SCARNA6.1-201ENST00000516989 LMOD1P29536 600 aaPredicted RBP7.45□□□□□ -1.22
SCARNA6.1-201ENST00000516989 SOX11P35716 441 aa7.45□□□□□ -1.22
SCARNA6.1-201ENST00000516989 IL6STP40189 918 aaPredicted RBP7.45□□□□□ -1.22
SCARNA6.1-201ENST00000516989 EIF5P55010 431 aaKnown RBP7.45□□□□□ -1.22
SCARNA6.1-201ENST00000516989 TWISTNBQ3B726 338 aaPredicted RBP7.45□□□□□ -1.22
SCARNA6.1-201ENST00000516989 KMT5BQ4FZB7 885 aa7.45□□□□□ -1.22
SCARNA6.1-201ENST00000516989 NBPF10Q6P3W6 841 aaKnown RBP7.45□□□□□ -1.22
SCARNA6.1-201ENST00000516989 RETREG3Q86VR2 466 aa7.45□□□□□ -1.22
SCARNA6.1-201ENST00000516989 NBPF15Q8N660 670 aa7.45□□□□□ -1.22
SCARNA6.1-201ENST00000516989 TSPYL6Q8N831 410 aa7.45□□□□□ -1.22
SCARNA6.1-201ENST00000516989 CHMP4AQ9BY43 222 aa7.45□□□□□ -1.22
SCARNA6.1-201ENST00000516989 KCPQ6ZWJ8 1503 aa7.45□□□□□ -1.22
SCARNA6.1-201ENST00000516989 PNPLA7Q6ZV29 1317 aa7.45□□□□□ -1.22
SCARNA6.1-201ENST00000516989 FANCIQ9NVI1 1328 aa7.45□□□□□ -1.22
SCARNA6.1-201ENST00000516989 VAMP4O75379 141 aa7.44□□□□□ -1.22
SCARNA6.1-201ENST00000516989 ANXA1P04083 346 aa7.44□□□□□ -1.22
SCARNA6.1-201ENST00000516989 HOXB7P09629 217 aa7.44□□□□□ -1.22
SCARNA6.1-201ENST00000516989 PBX2P40425 430 aa7.44□□□□□ -1.22
SCARNA6.1-201ENST00000516989 AIMP1Q12904 312 aaKnown RBP7.44□□□□□ -1.22
SCARNA6.1-201ENST00000516989 SEMA3FQ13275 785 aa7.44□□□□□ -1.22
SCARNA6.1-201ENST00000516989 PUS10Q3MIT2 529 aaKnown RBP7.44□□□□□ -1.22
SCARNA6.1-201ENST00000516989 MORN1Q5T089 497 aa7.44□□□□□ -1.22
SCARNA6.1-201ENST00000516989 USPL1Q5W0Q7 1092 aa7.44□□□□□ -1.22
SCARNA6.1-201ENST00000516989 MSL1Q68DK7 614 aa7.44□□□□□ -1.22
SCARNA6.1-201ENST00000516989 PNMA1Q8ND90 353 aa7.44□□□□□ -1.22
SCARNA6.1-201ENST00000516989 SLC16A10Q8TF71 515 aa7.44□□□□□ -1.22
SCARNA6.1-201ENST00000516989 NBPF3Q9H094 633 aa7.44□□□□□ -1.22
SCARNA6.1-201ENST00000516989 SRP68Q9UHB9 627 aaKnown RBP7.44□□□□□ -1.22
SCARNA6.1-201ENST00000516989 SOS1Q07889 1333 aaPredicted RBP7.44□□□□□ -1.22
SCARNA6.1-201ENST00000516989 LY75O60449 1722 aa7.44□□□□□ -1.22
SCARNA6.1-201ENST00000516989 VIRMAQ69YN4 1812 aaKnown RBP7.43□□□□□ -1.22
SCARNA6.1-201ENST00000516989 PROSER3Q2NL68 480 aa7.43□□□□□ -1.22
SCARNA6.1-201ENST00000516989 Q3C1V9 767 aa7.43□□□□□ -1.22
SCARNA6.1-201ENST00000516989 TMCO4Q5TGY1 634 aa7.43□□□□□ -1.22
SCARNA6.1-201ENST00000516989 CCDC30Q5VVM6 783 aa7.43□□□□□ -1.22
SCARNA6.1-201ENST00000516989 COPS6Q7L5N1 327 aa7.43□□□□□ -1.22
SCARNA6.1-201ENST00000516989 DZIP3Q86Y13 1208 aaKnown RBP7.43□□□□□ -1.22
SCARNA6.1-201ENST00000516989 ZFRQ96KR1 1074 aaKnown RBP7.43□□□□□ -1.22
SCARNA6.1-201ENST00000516989 UCN2Q96RP3 112 aa7.43□□□□□ -1.22
SCARNA6.1-201ENST00000516989 STK31Q9BXU1 1019 aa7.43□□□□□ -1.22
SCARNA6.1-201ENST00000516989 MTFR1LQ9H019 292 aa7.43□□□□□ -1.22
SCARNA6.1-201ENST00000516989 SPON1Q9HCB6 807 aa7.43□□□□□ -1.22
SCARNA6.1-201ENST00000516989 CHPF2Q9P2E5 772 aa7.43□□□□□ -1.22
SCARNA6.1-201ENST00000516989 DBF4Q9UBU7 674 aaPredicted RBP7.43□□□□□ -1.22
SCARNA6.1-201ENST00000516989 NARFQ9UHQ1 456 aa7.43□□□□□ -1.22
SCARNA6.1-201ENST00000516989 USTQ9Y2C2 406 aa7.43□□□□□ -1.22
SCARNA6.1-201ENST00000516989 SLC27A5Q9Y2P5 690 aa7.43□□□□□ -1.22
SCARNA6.1-201ENST00000516989 RGPD3A6NKT7 1758 aaPredicted RBP7.42□□□□□ -1.22
SCARNA6.1-201ENST00000516989 SIPA1L3O60292 1781 aaPredicted RBP7.42□□□□□ -1.22
SCARNA6.1-201ENST00000516989 RGPD4Q7Z3J3 1758 aa7.42□□□□□ -1.22
SCARNA6.1-201ENST00000516989 BHMG1C9JSJ3 638 aaPredicted RBP7.42□□□□□ -1.22
SCARNA6.1-201ENST00000516989 ACTN4O43707 911 aaKnown RBP7.42□□□□□ -1.22
SCARNA6.1-201ENST00000516989 POLD1P28340 1107 aa7.42□□□□□ -1.22
SCARNA6.1-201ENST00000516989 DESI1Q6ICB0 168 aa7.42□□□□□ -1.22
SCARNA6.1-201ENST00000516989 KIF6Q6ZMV9 814 aa7.42□□□□□ -1.22
SCARNA6.1-201ENST00000516989 BICDL1Q6ZP65 573 aa7.42□□□□□ -1.22
SCARNA6.1-201ENST00000516989 NLGN1Q8N2Q7 840 aa7.42□□□□□ -1.22
SCARNA6.1-201ENST00000516989 XAGE3Q8WTP9 111 aa7.42□□□□□ -1.22
SCARNA6.1-201ENST00000516989 DDX21Q9NR30 783 aaKnown RBP eCLIP7.42□□□□□ -1.22
SCARNA6.1-201ENST00000516989 HYPKQ9NX55 129 aa7.42□□□□□ -1.22
SCARNA6.1-201ENST00000516989 ERBB4Q15303 1308 aa7.42□□□□□ -1.22
SCARNA6.1-201ENST00000516989 ZBED9Q6R2W3 1325 aa7.42□□□□□ -1.22
SCARNA6.1-201ENST00000516989 RREB1Q92766 1687 aa7.41□□□□□ -1.22
SCARNA6.1-201ENST00000516989 C4BP0C0L5 1744 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 233.8 ms