RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 SMG1Q96Q15 3661 aaKnown RBP5.03□□□□□ -1.6
SCARNA13-201ENST00000516672 COL3A1P02461 1466 aaPredicted RBP5.03□□□□□ -1.6
SCARNA13-201ENST00000516672 UBE2Q2LH0YL09 131 aa5.03□□□□□ -1.6
SCARNA13-201ENST00000516672 IGF2BP3O00425 579 aaKnown RBP eCLIP5.03□□□□□ -1.6
SCARNA13-201ENST00000516672 SOX12O15370 315 aa5.03□□□□□ -1.6
SCARNA13-201ENST00000516672 DCXO43602 365 aa5.03□□□□□ -1.6
SCARNA13-201ENST00000516672 GMPSP49915 693 aaPredicted RBP5.03□□□□□ -1.6
SCARNA13-201ENST00000516672 SKIV2LQ15477 1246 aaKnown RBP5.03□□□□□ -1.6
SCARNA13-201ENST00000516672 LARP1BQ659C4 914 aaKnown RBP5.03□□□□□ -1.6
SCARNA13-201ENST00000516672 OLFM4Q6UX06 510 aa5.03□□□□□ -1.6
SCARNA13-201ENST00000516672 MICALL1Q8N3F8 863 aa5.03□□□□□ -1.6
SCARNA13-201ENST00000516672 C7orf43Q8WVR3 580 aa5.03□□□□□ -1.6
SCARNA13-201ENST00000516672 LBHD1Q9BQE6 289 aaPredicted RBP5.03□□□□□ -1.6
SCARNA13-201ENST00000516672 UNC93B1Q9H1C4 597 aa5.03□□□□□ -1.6
SCARNA13-201ENST00000516672 DLL3Q9NYJ7 618 aa5.03□□□□□ -1.6
SCARNA13-201ENST00000516672 JAG2Q9Y219 1238 aa5.03□□□□□ -1.6
SCARNA13-201ENST00000516672 FAM208AQ9UK61 1670 aaKnown RBP5.02□□□□□ -1.61
SCARNA13-201ENST00000516672 H0Y858 1186 aa5.02□□□□□ -1.61
SCARNA13-201ENST00000516672 TAF4O00268 1085 aa5.02□□□□□ -1.61
SCARNA13-201ENST00000516672 GRK4P32298 578 aa5.02□□□□□ -1.61
SCARNA13-201ENST00000516672 SSTR3P32745 418 aaPredicted RBP5.02□□□□□ -1.61
SCARNA13-201ENST00000516672 IRS1P35568 1242 aa5.02□□□□□ -1.61
SCARNA13-201ENST00000516672 PDE6BP35913 854 aa5.02□□□□□ -1.61
SCARNA13-201ENST00000516672 FKBP1BP68106 108 aa5.02□□□□□ -1.61
SCARNA13-201ENST00000516672 NFIXQ14938 502 aa5.02□□□□□ -1.61
SCARNA13-201ENST00000516672 CDCA5Q96FF9 252 aa5.02□□□□□ -1.61
SCARNA13-201ENST00000516672 ALG13Q9NP73 1137 aaKnown RBP5.02□□□□□ -1.61
SCARNA13-201ENST00000516672 TLR9Q9NR96 1032 aa5.02□□□□□ -1.61
SCARNA13-201ENST00000516672 POGKQ9P215 609 aa5.02□□□□□ -1.61
SCARNA13-201ENST00000516672 ANKFY1Q9P2R3 1169 aa5.02□□□□□ -1.61
SCARNA13-201ENST00000516672 BIN2Q9UBW5 565 aaPredicted RBP5.02□□□□□ -1.61
SCARNA13-201ENST00000516672 PDZRN3Q9UPQ7 1066 aa5.02□□□□□ -1.61
SCARNA13-201ENST00000516672 PIK3C2GO75747 1445 aa5.02□□□□□ -1.61
SCARNA13-201ENST00000516672 MYOM3Q5VTT5 1437 aa5.02□□□□□ -1.61
SCARNA13-201ENST00000516672 COL4A4P53420 1690 aaPredicted RBP5.02□□□□□ -1.61
SCARNA13-201ENST00000516672 ABCA12Q86UK0 2595 aa5.02□□□□□ -1.61
SCARNA13-201ENST00000516672 MAP3K13O43283 966 aa5.01□□□□□ -1.61
SCARNA13-201ENST00000516672 DNAJB2P25686 324 aa5.01□□□□□ -1.61
SCARNA13-201ENST00000516672 UBXN2AP68543 259 aa5.01□□□□□ -1.61
SCARNA13-201ENST00000516672 RC3H1Q5TC82 1133 aaKnown RBP5.01□□□□□ -1.61
SCARNA13-201ENST00000516672 RTKN2Q8IZC4 609 aa5.01□□□□□ -1.61
SCARNA13-201ENST00000516672 DCPSQ96C86 337 aaKnown RBP5.01□□□□□ -1.61
SCARNA13-201ENST00000516672 NUDT16Q96DE0 195 aaKnown RBP5.01□□□□□ -1.61
SCARNA13-201ENST00000516672 FSD1Q9BTV5 496 aa5.01□□□□□ -1.61
SCARNA13-201ENST00000516672 ARHGAP39Q9C0H5 1083 aa5.01□□□□□ -1.61
SCARNA13-201ENST00000516672 LHX6Q9UPM6 363 aa5.01□□□□□ -1.61
SCARNA13-201ENST00000516672 HELZ2Q9BYK8 2649 aaKnown RBP5.01□□□□□ -1.61
SCARNA13-201ENST00000516672 ANKRD30AQ9BXX3 1397 aa5.01□□□□□ -1.61
SCARNA13-201ENST00000516672 ARFGEF2Q9Y6D5 1785 aa5.01□□□□□ -1.61
SCARNA13-201ENST00000516672 ANKRD31Q8N7Z5 1873 aa5□□□□□ -1.61
SCARNA13-201ENST00000516672 AOX1Q06278 1338 aa5□□□□□ -1.61
SCARNA13-201ENST00000516672 FAM186AA6NE01 2351 aa5□□□□□ -1.61
SCARNA13-201ENST00000516672 SCN7AQ01118 1682 aa5□□□□□ -1.61
SCARNA13-201ENST00000516672 POTEB3A0JP26 581 aa5□□□□□ -1.61
SCARNA13-201ENST00000516672 CAPN2P17655 700 aa5□□□□□ -1.61
SCARNA13-201ENST00000516672 NBL1P41271 181 aa5□□□□□ -1.61
SCARNA13-201ENST00000516672 SOWAHCQ53LP3 525 aaPredicted RBP5□□□□□ -1.61
SCARNA13-201ENST00000516672 STYK1Q6J9G0 422 aa5□□□□□ -1.61
SCARNA13-201ENST00000516672 POTEBQ6S5H4 581 aa5□□□□□ -1.61
SCARNA13-201ENST00000516672 KIAA2013Q8IYS2 634 aa5□□□□□ -1.61
SCARNA13-201ENST00000516672 ADAM32Q8TC27 787 aa5□□□□□ -1.61
SCARNA13-201ENST00000516672 NANOS1Q8WY41 292 aaKnown RBP5□□□□□ -1.61
SCARNA13-201ENST00000516672 PIGBQ92521 554 aa5□□□□□ -1.61
SCARNA13-201ENST00000516672 NKD2Q969F2 451 aaPredicted RBP5□□□□□ -1.61
SCARNA13-201ENST00000516672 DEFB118Q96PH6 123 aa5□□□□□ -1.61
SCARNA13-201ENST00000516672 LSM14BQ9BX40 385 aaKnown RBP5□□□□□ -1.61
SCARNA13-201ENST00000516672 CHIC2Q9UKJ5 165 aa5□□□□□ -1.61
SCARNA13-201ENST00000516672 ZSWIM8A7E2V4 1837 aa5□□□□□ -1.61
SCARNA13-201ENST00000516672 RPGRIP1LQ68CZ1 1315 aa4.99□□□□□ -1.61
SCARNA13-201ENST00000516672 ADGRF5Q8IZF2 1346 aa4.99□□□□□ -1.61
SCARNA13-201ENST00000516672 MANSC4A6NHS7 340 aaPredicted RBP4.99□□□□□ -1.61
SCARNA13-201ENST00000516672 UBTFP17480 764 aaKnown RBP4.99□□□□□ -1.61
SCARNA13-201ENST00000516672 PRMT2P55345 433 aa4.99□□□□□ -1.61
SCARNA13-201ENST00000516672 INHBEP58166 350 aa4.99□□□□□ -1.61
SCARNA13-201ENST00000516672 RING1Q06587 406 aa4.99□□□□□ -1.61
SCARNA13-201ENST00000516672 KIAA0319Q5VV43 1072 aa4.99□□□□□ -1.61
SCARNA13-201ENST00000516672 USPL1Q5W0Q7 1092 aa4.99□□□□□ -1.61
SCARNA13-201ENST00000516672 NBPF3Q9H094 633 aa4.99□□□□□ -1.61
SCARNA13-201ENST00000516672 GGA3Q9NZ52 723 aa4.99□□□□□ -1.61
SCARNA13-201ENST00000516672 RIPOR2Q9Y4F9 1068 aa4.99□□□□□ -1.61
SCARNA13-201ENST00000516672 A0A0G2JMZ2 1700 aa4.98□□□□□ -1.61
SCARNA13-201ENST00000516672 RIF1Q5UIP0 2472 aaKnown RBP4.98□□□□□ -1.61
SCARNA13-201ENST00000516672 CCR10P46092 362 aa4.98□□□□□ -1.61
SCARNA13-201ENST00000516672 TCIRG1Q13488 830 aa4.98□□□□□ -1.61
SCARNA13-201ENST00000516672 SULF1Q8IWU6 871 aa4.98□□□□□ -1.61
SCARNA13-201ENST00000516672 FAM178BQ8IXR5 827 aa4.98□□□□□ -1.61
SCARNA13-201ENST00000516672 LARGE2Q8N3Y3 721 aa4.98□□□□□ -1.61
SCARNA13-201ENST00000516672 TIFAQ96CG3 184 aa4.98□□□□□ -1.61
SCARNA13-201ENST00000516672 TRIM47Q96LD4 638 aa4.98□□□□□ -1.61
SCARNA13-201ENST00000516672 BRIP1Q9BX63 1249 aa4.98□□□□□ -1.61
SCARNA13-201ENST00000516672 BCL2L13Q9BXK5 485 aa4.98□□□□□ -1.61
SCARNA13-201ENST00000516672 CRISPLD2Q9H0B8 497 aa4.98□□□□□ -1.61
SCARNA13-201ENST00000516672 C11orf49Q9H6J7 331 aa4.98□□□□□ -1.61
SCARNA13-201ENST00000516672 CNOT7Q9UIV1 285 aaKnown RBP4.98□□□□□ -1.61
SCARNA13-201ENST00000516672 COG5Q9UP83 839 aa4.98□□□□□ -1.61
SCARNA13-201ENST00000516672 FLT4P35916 1363 aa4.98□□□□□ -1.61
SCARNA13-201ENST00000516672 ITPR3Q14573 2671 aa4.98□□□□□ -1.61
SCARNA13-201ENST00000516672 CDHR2Q9BYE9 1310 aa4.97□□□□□ -1.61
SCARNA13-201ENST00000516672 ITGB4P16144 1822 aa4.97□□□□□ -1.61
SCARNA13-201ENST00000516672 GVINP1Q7Z2Y8 2422 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms